Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for polr3f

Gene Name Gene ID Reads Annotation
polr3f ENSDARG00000012572, ENSDARG00000109250 865 polymerase (RNA) III (DNA directed) polypeptide F [Source:ZFIN;Acc:ZDB-GENE-040426-972]










Genes with expression patterns similar to polr3f

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. polr3f ENSDARG00000012572, ENSDARG00000109250 865 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 polymerase (RNA) III (DNA directed) polypeptide F [Source:ZFIN;Acc:ZDB-GENE-040426-972]
2. clpp ENSDARG00000020679 2125 1.538 - - - - - 0.779 0.759 - - caseinolytic mitochondrial matrix peptidase proteolytic subunit [Source:ZFIN;Acc:ZDB-GENE-030131-7860]
3. CABZ01067609.1 CABZ01067609.1 111 1.513 - - - - - 0.736 0.777 - -
4. C3H7orf55 C3H7orf55 359 1.485 - - - - - 0.728 0.757 - -
5. rnf40 ENSDARG00000054201, ENSDARG00000114667 2440 1.478 - 0.724 - - - 0.754 - - - ring finger protein 40 [Source:ZFIN;Acc:ZDB-GENE-030131-6607]
6. FNBP4 ENSDARG00000051800 2839 1.478 0.723 - - - - - 0.755 - - formin binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-130530-633]
7. si:ch211-152p11.4 ENSDARG00000079705 2341 1.469 - - - - - 0.725 0.744 - - si:ch211-152p11.4 [Source:ZFIN;Acc:ZDB-GENE-060503-764]
8. sox4b ENSDARG00000098834 1634 0.871 - - - - - - 0.871 - - SRY (sex determining region Y)-box 4b [Source:ZFIN;Acc:ZDB-GENE-040426-1274]
9. map2k5 ENSDARG00000011851 287 0.867 - - - - - - 0.867 - - mitogen-activated protein kinase kinase 5 [Source:ZFIN;Acc:ZDB-GENE-030131-1517]
10. znf513 znf513 248 0.865 - - - - - - 0.865 - -
11. arhgef7a ENSDARG00000006299, ENSDARG00000114088 1627 0.862 - - - - - - 0.862 - - Rho guanine nucleotide exchange factor (GEF) 7a [Source:ZFIN;Acc:ZDB-GENE-060322-11]
12. mettl22 ENSDARG00000077863 81 0.861 - - - - - - 0.861 - - methyltransferase like 22 [Source:ZFIN;Acc:ZDB-GENE-081022-70]
13. cul3a ENSDARG00000038967 6155 0.861 - - - - - - 0.861 - - cullin 3a [Source:ZFIN;Acc:ZDB-GENE-030131-3376]
14. bcs1l ENSDARG00000012295 664 0.854 - - - - - 0.854 - - - BC1 (ubiquinol-cytochrome c reductase) synthesis-like [Source:ZFIN;Acc:ZDB-GENE-040426-938]
15. ccnh ENSDARG00000007657 745 0.853 - 0.853 - - - - - - - cyclin H [Source:ZFIN;Acc:ZDB-GENE-050320-13]
16. pik3c2a ENSDARG00000060841 785 0.848 - - - - - - 0.848 - - phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha [Source:ZFIN;Acc:ZDB-GENE-030328-39]
17. lztr1 ENSDARG00000015905, ENSDARG00000114621 632 0.847 - - - - - - 0.847 - - leucine-zipper-like transcription regulator 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9564]
18. CU570791.5 CU570791.5 872 0.84 - - - - - 0.840 - - -
19. plgrkt ENSDARG00000100789 783 0.84 - - - - - - 0.840 - - plasminogen receptor, C-terminal lysine transmembrane protein [Source:ZFIN;Acc:ZDB-GENE-050809-125]
20. ubxn2a ENSDARG00000087180 152 0.839 - 0.839 - - - - - - - UBX domain protein 2A [Source:ZFIN;Acc:ZDB-GENE-110411-202]
21. cdr2l ENSDARG00000026834 254 0.834 - 0.834 - - - - - - - cerebellar degeneration-related protein 2-like [Source:ZFIN;Acc:ZDB-GENE-030131-8171]
22. nelfb ENSDARG00000035505 1337 0.832 - - - - - - 0.832 - - negative elongation factor complex member B [Source:ZFIN;Acc:ZDB-GENE-040426-765]
23. uck1 ENSDARG00000022218, ENSDARG00000109414 355 0.83 - - - - - - 0.830 - - uridine-cytidine kinase 1 [Source:ZFIN;Acc:ZDB-GENE-040912-113]
24. aldh3a2a ENSDARG00000028259 591 0.829 - - - - - - 0.829 - - aldehyde dehydrogenase 3 family, member A2a [Source:ZFIN;Acc:ZDB-GENE-040718-74]
25. exoc7 ENSDARG00000087229 987 0.827 - - - - - 0.827 - - - exocyst complex component 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2752]
26. fam107b ENSDARG00000026865, ENSDARG00000113209, ENSDARG00000116517 861 0.827 0.827 - - - - - - - - family with sequence similarity 107, member B [Source:ZFIN;Acc:ZDB-GENE-031030-12]
27. ofd1 ENSDARG00000000529 203 0.826 - - - - - - 0.826 - - oral-facial-digital syndrome 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5427]
28. TMEM230 TMEM230 351 0.826 - - - - - 0.826 - - -
29. TRPM4_1 TRPM4_1 273 0.824 - - - - - 0.824 - - -
30. lrp5 ENSDARG00000006921 3522 0.823 - - - - - - 0.823 - - low density lipoprotein receptor-related protein 5 [Source:ZFIN;Acc:ZDB-GENE-050518-2]
31. ptprjb ptprjb 95 0.822 - - - - - 0.822 - - -
32. mettl6 ENSDARG00000070085 366 0.819 - - - - - - 0.819 - - methyltransferase like 6 [Source:ZFIN;Acc:ZDB-GENE-040426-926]
33. asl ENSDARG00000033361 295 0.813 - - - - - 0.813 - - - argininosuccinate lyase [Source:ZFIN;Acc:ZDB-GENE-040426-1152]
34. rit1 ENSDARG00000069150 520 0.812 0.812 - - - - - - - - Ras-like without CAAX 1 [Source:ZFIN;Acc:ZDB-GENE-070912-329]
35. fam86a fam86a 174 0.811 - - - - - 0.811 - - -
36. cnot10 ENSDARG00000058528 478 0.811 - - - - - 0.811 - - - CCR4-NOT transcription complex, subunit 10 [Source:ZFIN;Acc:ZDB-GENE-060929-368]
37. mir199-3 mir199-3 826 0.809 - - - - - - 0.809 - -
38. myo18aa ENSDARG00000075752 2021 0.808 - - - - - - 0.808 - - myosin XVIIIAa [Source:ZFIN;Acc:ZDB-GENE-080425-5]
39. tfap2b ENSDARG00000012667 746 0.807 - - - - - 0.807 - - - transcription factor AP-2 beta [Source:ZFIN;Acc:ZDB-GENE-050417-394]
40. PAPD5 2090 0.806 - 0.806 - - - - - - - PAP associated domain containing 5, transcript variant X1
41. cmtm6 ENSDARG00000099631 641 0.805 - - - - - 0.805 - - - CKLF-like MARVEL transmembrane domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-030729-15]
42. itga3a ENSDARG00000037917 219 0.804 - 0.804 - - - - - - - integrin, alpha 3a [Source:ZFIN;Acc:ZDB-GENE-090805-3]
43. zgc:194392 ENSDARG00000074809 329 0.803 - - - - - 0.803 - - - zgc:194392 [Source:ZFIN;Acc:ZDB-GENE-030131-4774]
44. dip2ba ENSDARG00000005350, ENSDARG00000111011, ENSDARG00000111214 1640 0.802 - - - - - - 0.802 - - disco-interacting protein 2 homolog Ba [Source:ZFIN;Acc:ZDB-GENE-040426-2305]
45. AL929222.1 ENSDARG00000096994 1293 0.801 - - - - - - 0.801 - -
46. gpt2 ENSDARG00000012199 1415 0.801 - - - - - - 0.801 - - glutamic pyruvate transaminase (alanine aminotransferase) 2 [Source:ZFIN;Acc:ZDB-GENE-030729-8]
47. spen ENSDARG00000074245, ENSDARG00000116696 3054 0.798 0.798 - - - - - - - - spen family transcriptional repressor [Source:ZFIN;Acc:ZDB-GENE-050309-70]
48. znf574 ENSDARG00000087074 885 0.797 - 0.797 - - - - - - - zinc finger protein 574 [Source:ZFIN;Acc:ZDB-GENE-100922-259]
49. arsg ENSDARG00000101715 57 0.796 - - - - - 0.796 - - - arylsulfatase G [Source:ZFIN;Acc:ZDB-GENE-060503-154]
50. JMJD1C_1 JMJD1C_1 3094 0.795 - - - - - - 0.795 - -
51. EML6 250 0.794 - 0.794 - - - - - - - echinoderm microtubule associated protein like 6
52. katnb1 ENSDARG00000005456, ENSDARG00000110223, ENSDARG00000116933 630 0.794 - - - - - - 0.794 - - katanin p80 (WD repeat containing) subunit B 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1954]
53. lmod1 lmod1 409 0.794 0.794 - - - - - - - -
54. dpysl3 ENSDARG00000002587 4381 0.793 - 0.793 - - - - - - - dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
55. aktip ENSDARG00000026862, ENSDARG00000115058 2775 0.792 - - - - - 0.792 - - - akt interacting protein [Source:ZFIN;Acc:ZDB-GENE-030909-5]
56. CR382298.3 CR382298.3 666 0.792 - - - 0.792 - - - - -
57. erg ENSDARG00000077304 161 0.791 - 0.791 - - - - - - - v-ets avian erythroblastosis virus E26 oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-041212-40]
58. st6galnac5b ENSDARG00000057433, ENSDARG00000110829 248 0.791 - - - - - 0.791 - - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5b [Source:ZFIN;Acc:ZDB-GENE-040912-25]
59. rab18b ENSDARG00000098344 1154 0.79 - - - - - - 0.790 - - RAB18B, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040801-185]
60. dnajc25 ENSDARG00000067613, ENSDARG00000111375 1435 0.79 - - - - - - 0.790 - - DnaJ (Hsp40) homolog, subfamily C , member 25 [Source:ZFIN;Acc:ZDB-GENE-081104-137]
61. spon2a ENSDARG00000025465, ENSDARG00000115300 294 0.789 - - - - - 0.789 - - - spondin 2a, extracellular matrix protein [Source:ZFIN;Acc:ZDB-GENE-990415-160]
62. cops5 ENSDARG00000057624 1485 0.789 - - - - - - 0.789 - - COP9 signalosome subunit 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1686]
63. dph5 ENSDARG00000100242, ENSDARG00000115537 537 0.789 - - - - - - 0.789 - - diphthamide biosynthesis 5 [Source:ZFIN;Acc:ZDB-GENE-041114-85]
64. pip5k1bb ENSDARG00000006508 2812 0.788 - - - - - 0.788 - - - phosphatidylinositol-4-phosphate 5-kinase, type I, beta b [Source:ZFIN;Acc:ZDB-GENE-040912-141]
65. thap7 ENSDARG00000070704 225 0.788 - - - - - 0.788 - - - THAP domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-040914-84]
66. lamp1 1017 0.788 0.788 - - - - - - - - lysosomal-associated membrane protein 1
67. mitd1 ENSDARG00000044766 182 0.788 - - - - - - 0.788 - - MIT, microtubule interacting and transport, domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-923]
68. rab14_1 ENSDARG00000074246 481 0.788 - 0.788 - - - - - - - RAB14, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-030826-20]
69. unga ENSDARG00000042527 1169 0.785 - 0.785 - - - - - - - uracil DNA glycosylase a [Source:ZFIN;Acc:ZDB-GENE-040426-900]
70. TRAFD1 ENSDARG00000075123, ENSDARG00000109953 358 0.785 - - - - - - 0.785 - - TRAF-type zinc finger domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-070410-43]
71. vegfc ENSDARG00000069640 198 0.785 - 0.785 - - - - - - - vascular endothelial growth factor c [Source:ZFIN;Acc:ZDB-GENE-040303-4]
72. BX511013.1 ENSDARG00000112403 1018 0.782 - 0.782 - - - - - - - uncharacterized LOC103908633 [Source:NCBI gene;Acc:103908633]
73. cep104 ENSDARG00000060361 303 0.782 - - - - - 0.782 - - - centrosomal protein 104 [Source:ZFIN;Acc:ZDB-GENE-060503-195]
74. nxnl2 ENSDARG00000003934 386 0.781 - - - - - 0.781 - - - nucleoredoxin like 2 [Source:ZFIN;Acc:ZDB-GENE-041212-55]
75. xkr8.3 ENSDARG00000039996 457 0.78 - 0.780 - - - - - - - XK, Kell blood group complex subunit-related family, member 8, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-041010-107]
76. cflara ENSDARG00000055966 464 0.78 - - - - - 0.780 - - - CASP8 and FADD-like apoptosis regulator a [Source:ZFIN;Acc:ZDB-GENE-030826-3]
77. matr3l1.1_1 ENSDARG00000000394, ENSDARG00000001162 1860 0.78 - 0.780 - - - - - - - matrin 3-like 1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-40]
78. si:dkey-3h3.3 ENSDARG00000067718 225 0.78 - - - - - 0.780 - - - si:dkey-3h3.3 [Source:ZFIN;Acc:ZDB-GENE-060526-299]
79. fbxw2 ENSDARG00000009745 618 0.779 - - - - - - 0.779 - - F-box and WD repeat domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-050522-303]
80. mtg2 ENSDARG00000063574 299 0.778 - - - - - 0.778 - - - mitochondrial ribosome-associated GTPase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-2209]
81. si:dkey-65j6.2 ENSDARG00000103586 533 0.777 - 0.777 - - - - - - - si:dkey-65j6.2 [Source:ZFIN;Acc:ZDB-GENE-090313-319]
82. ppm1aa ENSDARG00000032155 1039 0.777 0.777 - - - - - - - - protein phosphatase, Mg2+/Mn2+ dependent, 1Aa [Source:ZFIN;Acc:ZDB-GENE-991102-15]
83. snw1 ENSDARG00000091563 263 0.777 - 0.777 - - - - - - - SNW domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-571]
84. yth2 yth2 3716 0.777 - - - - - - 0.777 - -
85. CABZ01038708.1 CABZ01038708.1 28 0.776 - - - - - - 0.776 - -
86. aff2 ENSDARG00000052242 540 0.776 - - - - - 0.776 - - - AF4/FMR2 family, member 2 [Source:ZFIN;Acc:ZDB-GENE-110411-190]
87. hook1 ENSDARG00000042946 452 0.776 - - - - - 0.776 - - - hook microtubule-tethering protein 1 [Source:ZFIN;Acc:ZDB-GENE-041001-159]
88. chn2 ENSDARG00000011845 217 0.774 - - - - - 0.774 - - - chimerin 2 [Source:ZFIN;Acc:ZDB-GENE-091020-5]
89. vps52 ENSDARG00000099258 780 0.774 - - - - - - 0.774 - - vacuolar protein sorting 52 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-010430-2]
90. pex1 ENSDARG00000098904 168 0.774 - - - - - 0.774 - - - peroxisomal biogenesis factor 1 [Source:ZFIN;Acc:ZDB-GENE-070530-1]
91. CABZ01093075.1 ENSDARG00000086616 251 0.773 - - - - - - 0.773 - - cabz01093075.1 [Source:ZFIN;Acc:ZDB-GENE-160113-9]
92. brwd1 ENSDARG00000074747, ENSDARG00000111353 1008 0.772 - 0.772 - - - - - - - bromodomain and WD repeat domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041111-120]
93. sult1st1 ENSDARG00000028275 806 0.772 - - - - - - 0.772 - - sulfotransferase family 1, cytosolic sulfotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2144]
94. BX005085.2 ENSDARG00000098122 196 0.771 - 0.771 - - - - - - -
95. ENSDARG00000023499 ENSDARG00000023499 395 0.771 - 0.771 - - - - - - -
96. PHF13 ENSDARG00000102023 1102 0.771 - - - - - - 0.771 - - PHD finger protein 13 [Source:ZFIN;Acc:ZDB-GENE-121113-2]
97. CABZ01117079.1 CABZ01117079.1 123 0.77 - - - - - 0.770 - - -
98. h1fx ENSDARG00000054058 4075 0.77 0.770 - - - - - - - - H1 histone family, member X [Source:ZFIN;Acc:ZDB-GENE-030131-1228]
99. ATP10B ENSDARG00000076230 989 0.77 - - - - - 0.770 - - - ATPase phospholipid transporting 10B [Source:ZFIN;Acc:ZDB-GENE-130530-796]
100. pdgfra_1 ENSDARG00000070494, ENSDARG00000113952 1996 0.77 - - - - - - 0.770 - - platelet-derived growth factor receptor, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-208]

There are 320 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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