Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for polr2i

Gene Name Gene ID Reads Annotation
polr2i ENSDARG00000040443, ENSDARG00000110652 879 polymerase (RNA) II (DNA directed) polypeptide I [Source:ZFIN;Acc:ZDB-GENE-041010-106]










Genes with expression patterns similar to polr2i

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. polr2i ENSDARG00000040443, ENSDARG00000110652 879 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 polymerase (RNA) II (DNA directed) polypeptide I [Source:ZFIN;Acc:ZDB-GENE-041010-106]
2. cdc5l ENSDARG00000043797 985 2.217 - 0.725 - - - 0.752 0.740 - - CDC5 cell division cycle 5-like (S. pombe) [Source:ZFIN;Acc:ZDB-GENE-040426-821]
3. nol6 ENSDARG00000059711, ENSDARG00000115621 853 1.657 0.859 - - - - - 0.798 - - nucleolar protein 6 (RNA-associated) [Source:ZFIN;Acc:ZDB-GENE-030131-6294]
4. rnaseh2b ENSDARG00000005128, ENSDARG00000111990, ENSDARG00000115076 391 1.625 - - - 0.791 - - 0.834 - - ribonuclease H2, subunit B [Source:ZFIN;Acc:ZDB-GENE-040426-1090]
5. lin28a ENSDARG00000016999 723 1.573 - 0.750 - - - - 0.823 - - lin-28 homolog A (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-040426-747]
6. cdk6 ENSDARG00000070228 1778 1.558 - 0.746 - - - - 0.812 - - cyclin-dependent kinase 6 [Source:ZFIN;Acc:ZDB-GENE-060503-786]
7. RBM7 ENSDARG00000020841 1203 1.548 - - - 0.744 - - 0.804 - - RNA binding motif protein 7 [Source:ZFIN;Acc:ZDB-GENE-030131-6724]
8. BUD13 BUD13 594 1.546 - 0.788 - - - - 0.758 - -
9. chmp7 ENSDARG00000041362 831 1.544 - 0.844 - - - - - - 0.700 charged multivesicular body protein 7 [Source:ZFIN;Acc:ZDB-GENE-040426-1750]
10. arid1b ENSDARG00000092503 1376 1.542 - - - - - 0.814 0.728 - - AT rich interactive domain 1B (SWI1-like) [Source:ZFIN;Acc:ZDB-GENE-030131-4459]
11. zgc:174906 ENSDARG00000075314 2187 1.54 - - - - - 0.813 0.727 - - zgc:174906 [Source:ZFIN;Acc:ZDB-GENE-030131-6125]
12. rbm25 rbm25 3629 1.539 - 0.718 - - - - 0.821 - -
13. hoxd9a ENSDARG00000059274 3414 1.531 - - - - - 0.758 0.773 - - homeobox D9a [Source:ZFIN;Acc:ZDB-GENE-990415-121]
14. tia1 ENSDARG00000052536, ENSDARG00000114478 4392 1.529 - - - - - 0.708 0.821 - - TIA1 cytotoxic granule-associated RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-1506]
15. ddx39ab ENSDARG00000015111 11619 1.527 - - - - - 0.725 0.802 - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Ab [Source:ZFIN;Acc:ZDB-GENE-040426-2902]
16. whsc1l1 8544 1.518 - - - - - 0.807 0.711 - - Wolf-Hirschhorn syndrome candidate 1-like 1, transcript variant X2
17. ywhag2 ENSDARG00000071658, ENSDARG00000116741 3326 1.518 - 0.808 - - - - 0.710 - - 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-061023-2]
18. cdc6 ENSDARG00000009942, ENSDARG00000109602 2540 1.51 - 0.790 - - - - 0.720 - - cell division cycle 6 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050506-131]
19. slc25a32a ENSDARG00000089791 511 1.508 - - - - - - 0.795 - 0.713 solute carrier family 25 (mitochondrial folate carrier), member 32a [Source:ZFIN;Acc:ZDB-GENE-040426-758]
20. ptrhd1 ENSDARG00000016122 2705 1.507 0.752 0.755 - - - - - - - peptidyl-tRNA hydrolase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-081110-2]
21. h2afva ENSDARG00000068820 16427 1.505 - - - - - 0.702 0.803 - - H2A histone family, member Va [Source:ZFIN;Acc:ZDB-GENE-020717-1]
22. hs2st1a ENSDARG00000099478 864 1.502 - 0.733 - - - - 0.769 - - heparan sulfate 2-O-sulfotransferase 1a [Source:ZFIN;Acc:ZDB-GENE-070112-2312]
23. si:ch211-156j22.4 ENSDARG00000094977 4350 1.499 - - - - - 0.753 0.746 - - si:ch211-156j22.4 [Source:ZFIN;Acc:ZDB-GENE-030131-1968]
24. ZNF618 ENSDARG00000071469 2347 1.496 - - - - - 0.774 0.722 - - zinc finger protein 618 [Source:ZFIN;Acc:ZDB-GENE-030131-2063]
25. carm1 ENSDARG00000018698 5599 1.49 - - - - 0.702 0.788 - - - coactivator-associated arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040724-77]
26. pik3r3b ENSDARG00000034409, ENSDARG00000113215, ENSDARG00000117028 3213 1.487 - - - - - 0.774 0.713 - - phosphoinositide-3-kinase, regulatory subunit 3b (gamma) [Source:ZFIN;Acc:ZDB-GENE-040426-743]
27. ppa2 ENSDARG00000009685 209 1.481 - - - - - - 0.726 - 0.755 pyrophosphatase (inorganic) 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1857]
28. tubg1 ENSDARG00000015610 2433 1.48 0.725 - - - - - 0.755 - - tubulin, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-040426-836]
29. rbb4 rbb4 15541 1.479 - - - - - 0.748 0.731 - -
30. hmg20a ENSDARG00000031198 1763 1.472 - - - - - 0.721 0.751 - - high mobility group 20A [Source:ZFIN;Acc:ZDB-GENE-030131-5107]
31. llgl1 ENSDARG00000009693 4205 1.47 - - - 0.752 - - 0.718 - - lethal giant larvae homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-060825-69]
32. foxo3b ENSDARG00000042904 5046 1.467 - - - - - 0.731 0.736 - - forkhead box O3b [Source:ZFIN;Acc:ZDB-GENE-990708-6]
33. ulk1b ENSDARG00000074481 1212 1.454 - - - - - - 0.731 - 0.723 unc-51 like autophagy activating kinase 1 [Source:ZFIN;Acc:ZDB-GENE-071203-2]
34. cntnap2b ENSDARG00000074558, ENSDARG00000109616, ENSDARG00000116850 559 1.452 0.706 - - - - - 0.746 - - contactin associated protein like 2b [Source:NCBI gene;Acc:563345]
35. ZNF710 ZNF710 766 1.449 - - - - - 0.711 0.738 - -
36. msl2a ENSDARG00000038909 1357 1.447 - - - - - 0.701 0.746 - - male-specific lethal 2 homolog a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-070912-449]
37. ssbp4 ENSDARG00000056483 10196 1.447 - - - - - 0.724 0.723 - - single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
38. ENSDARG00000087348 ENSDARG00000087348 2870 1.444 - - - - - - 0.739 - 0.705
39. hoxa11b ENSDARG00000007009 3983 1.441 - - - - - 0.732 0.709 - - homeobox A11b [Source:ZFIN;Acc:ZDB-GENE-990415-4]
40. med13a ENSDARG00000053884, ENSDARG00000112778 931 1.44 - - - - - 0.733 0.707 - - mediator complex subunit 13a [Source:ZFIN;Acc:ZDB-GENE-070627-13]
41. mier2 ENSDARG00000071413 789 1.434 - - - 0.712 - - 0.722 - - mesoderm induction early response 1, family member 2 [Source:ZFIN;Acc:ZDB-GENE-050208-795]
42. phf8 ENSDARG00000006584 476 1.434 - - - 0.722 - - 0.712 - - PHD finger protein 8 [Source:ZFIN;Acc:ZDB-GENE-060419-1]
43. si:dkey-117n7.5 ENSDARG00000089640 452 1.419 - 0.703 - - - - 0.716 - - si:dkey-117n7.5 [Source:ZFIN;Acc:ZDB-GENE-060503-331]
44. cbx2 ENSDARG00000044938 1576 1.411 - 0.701 - - - 0.710 - - - chromobox homolog 2 (Drosophila Pc class) [Source:ZFIN;Acc:ZDB-GENE-030131-5502]
45. kpnb3 ENSDARG00000040245 7967 1.409 - 0.703 - - - - 0.706 - - karyopherin (importin) beta 3 [Source:ZFIN;Acc:ZDB-GENE-030424-2]
46. ubp1 ENSDARG00000018000 1047 0.928 - - - - - - 0.928 - - upstream binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060503-870]
47. rbms3 ENSDARG00000044574 2514 0.906 - - - - - - 0.906 - - RNA binding motif, single stranded interacting protein [Source:ZFIN;Acc:ZDB-GENE-060929-244]
48. gcfc2 ENSDARG00000079020 479 0.897 - - - - - - 0.897 - - GC-rich sequence DNA-binding factor 2 [Source:ZFIN;Acc:ZDB-GENE-080204-19]
49. LIG1 ENSDARG00000060041, ENSDARG00000110159, ENSDARG00000113788 8110 0.892 - - - - - - 0.892 - - ligase I, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-110404-2]
50. wu:fb17g07 wu:fb17g07 10567 0.891 - - - - - - 0.891 - -
51. puf60a ENSDARG00000032175 5618 0.891 - - - - - - 0.891 - - poly-U binding splicing factor a [Source:ZFIN;Acc:ZDB-GENE-030131-2891]
52. pigu ENSDARG00000075530 348 0.891 - - - - - - 0.891 - - phosphatidylinositol glycan anchor biosynthesis, class U [Source:ZFIN;Acc:ZDB-GENE-100629-1]
53. sec22a ENSDARG00000078328 1207 0.89 - - - - - - 0.890 - - SEC22 homolog A, vesicle trafficking protein [Source:ZFIN;Acc:ZDB-GENE-030131-3553]
54. cx43.4 ENSDARG00000007099 16369 0.89 - - - - - 0.890 - - - connexin 43.4 [Source:ZFIN;Acc:ZDB-GENE-990415-38]
55. nme5 ENSDARG00000041617 135 0.884 - - - - - - 0.884 - - NME/NM23 family member 5 [Source:ZFIN;Acc:ZDB-GENE-040718-221]
56. irx3b ENSDARG00000031138 2538 0.884 - - - - - - 0.884 - - iroquois homeobox 3b [Source:ZFIN;Acc:ZDB-GENE-030131-525]
57. lrrc6 ENSDARG00000053318 146 0.883 - - - - - - 0.883 - - leucine rich repeat containing 6 [Source:ZFIN;Acc:ZDB-GENE-040827-2]
58. vldlr ENSDARG00000006257 772 0.881 - - - - - - 0.881 - - very low density lipoprotein receptor [Source:ZFIN;Acc:ZDB-GENE-040426-803]
59. ipo9 ENSDARG00000016753, ENSDARG00000113327 936 0.878 - - - - - - 0.878 - - importin 9 [Source:ZFIN;Acc:ZDB-GENE-040426-2953]
60. CCDC114 ENSDARG00000015010 190 0.877 - - - - - - 0.877 - - coiled-coil domain containing 114 [Source:ZFIN;Acc:ZDB-GENE-041114-110]
61. rpp14 ENSDARG00000011152 524 0.877 - - - - - - 0.877 - - ribonuclease P/MRP 14 subunit [Source:ZFIN;Acc:ZDB-GENE-050522-182]
62. rassf2a ENSDARG00000029865, ENSDARG00000113625 1134 0.876 - - - - - - 0.876 - - Ras association (RalGDS/AF-6) domain family member 2a [Source:ZFIN;Acc:ZDB-GENE-040912-124]
63. cfl1 ENSDARG00000021124 78399 0.875 - - - - - - 0.875 - - cofilin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-215]
64. syncripl ENSDARG00000026723 3889 0.873 - - - - - - 0.873 - - synaptotagmin binding, cytoplasmic RNA interacting protein, like [Source:ZFIN;Acc:ZDB-GENE-030131-3104]
65. rad21a_1 ENSDARG00000006092 4482 0.873 - - - - - - 0.873 - - RAD21 cohesin complex component a [Source:ZFIN;Acc:ZDB-GENE-030131-994]
66. apex1 ENSDARG00000045843 6345 0.871 - - - - - - 0.871 - - APEX nuclease (multifunctional DNA repair enzyme) 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2761]
67. si:ch211-238e22.1 si:ch211-238e22.1 1032 0.87 - - - - - - 0.870 - -
68. ldb2b ENSDARG00000034896, ENSDARG00000113987, ENSDARG00000116485 976 0.869 - - - - - - 0.869 - - LIM domain binding 2b [Source:ZFIN;Acc:ZDB-GENE-990415-137]
69. phrf1 ENSDARG00000075252 1982 0.868 - 0.868 - - - - - - - PHD and ring finger domains 1 [Source:ZFIN;Acc:ZDB-GENE-030131-624]
70. hoxb9a ENSDARG00000056023 11856 0.868 - - - - - - 0.868 - - homeobox B9a [Source:ZFIN;Acc:ZDB-GENE-990415-109]
71. ift46 ENSDARG00000011240 2499 0.868 - - - - - - 0.868 - - intraflagellar transport 46 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-080102-3]
72. dbn1 ENSDARG00000069113 4527 0.868 - - - - - - 0.868 - - drebrin 1 [Source:ZFIN;Acc:ZDB-GENE-091204-284]
73. nabp1a ENSDARG00000004692, ENSDARG00000115485 1843 0.865 - - - - - - 0.865 - - nucleic acid binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-041212-71]
74. ppil1 ENSDARG00000015422 1353 0.864 - - - - - - - 0.864 - peptidylprolyl isomerase (cyclophilin)-like 1 [Source:ZFIN;Acc:ZDB-GENE-051009-1]
75. snrpd3l ENSDARG00000076283 7655 0.864 - - - - - - 0.864 - - small nuclear ribonucleoprotein D3 polypeptide, like [Source:ZFIN;Acc:ZDB-GENE-030131-5219]
76. klhl8 ENSDARG00000101270 1305 0.864 - - - - - - 0.864 - - kelch-like family member 8 [Source:ZFIN;Acc:ZDB-GENE-070209-226]
77. tmem106bb ENSDARG00000035949, ENSDARG00000113700 1415 0.861 - - - - - - 0.861 - - transmembrane protein 106Bb [Source:ZFIN;Acc:ZDB-GENE-050913-37]
78. atf7ip ENSDARG00000069619 5495 0.861 - - - - - - 0.861 - - activating transcription factor 7 interacting protein [Source:ZFIN;Acc:ZDB-GENE-061103-178]
79. hirip3 ENSDARG00000027749, ENSDARG00000115688 5875 0.861 - - - - - - 0.861 - - HIRA interacting protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-5753]
80. hcfc1b ENSDARG00000012519 3633 0.86 - - - - - - 0.860 - - host cell factor C1b [Source:ZFIN;Acc:ZDB-GENE-030131-2411]
81. ift52 ENSDARG00000045025 606 0.859 - - - - - - 0.859 - - intraflagellar transport 52 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-040614-3]
82. meis3 ENSDARG00000002795 2509 0.858 - - - - - - 0.858 - - myeloid ecotropic viral integration site 3 [Source:ZFIN;Acc:ZDB-GENE-010406-2]
83. sumo3b ENSDARG00000035993 3414 0.858 - - - - - - 0.858 - - small ubiquitin-like modifier 3b [Source:ZFIN;Acc:ZDB-GENE-040718-426]
84. rnaseh2a ENSDARG00000018891 1979 0.857 - - - - - - 0.857 - - ribonuclease H2, subunit A [Source:ZFIN;Acc:ZDB-GENE-040426-976]
85. cluap1 ENSDARG00000079110 280 0.856 - - - - - - 0.856 - - clusterin associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1943]
86. npm1b ENSDARG00000037675 5448 0.856 - - - - - - 0.856 - - nucleophosmin 1b [Source:ZFIN;Acc:ZDB-GENE-080723-7]
87. st3gal2 ENSDARG00000112898 370 0.856 - - - - - - 0.856 - - ST3 beta-galactoside alpha-2,3-sialyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-050419-181]
88. CCNA2 ENSDARG00000011094 3996 0.856 - - - - - 0.856 - - - cyclin A2 [Source:ZFIN;Acc:ZDB-GENE-020418-1]
89. si:dkey-33c12.3 ENSDARG00000057881, ENSDARG00000110707 394 0.855 - - - - - - 0.855 - - si:dkey-33c12.3 [Source:ZFIN;Acc:ZDB-GENE-030131-7320]
90. lbx2 ENSDARG00000025131 1388 0.855 - - - - - - 0.855 - - ladybird homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-001206-2]
91. znf865 ENSDARG00000036698 15532 0.854 - - - - - - 0.854 - - zinc finger protein 865 [Source:ZFIN;Acc:ZDB-GENE-060503-896]
92. sars ENSDARG00000008237 3330 0.853 - 0.853 - - - - - - - seryl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-040831-1]
93. nfyba ENSDARG00000039185 1804 0.853 - - - - - - 0.853 - - nuclear transcription factor Y, beta a [Source:ZFIN;Acc:ZDB-GENE-050417-13]
94. lrrc40 ENSDARG00000017708 1156 0.851 - - - - - - 0.851 - - leucine rich repeat containing 40 [Source:ZFIN;Acc:ZDB-GENE-030131-6062]
95. ints1 ENSDARG00000100419 1958 0.848 - - - - - - 0.848 - - integrator complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6523]
96. nol11 ENSDARG00000026767 2528 0.847 - - - - - - 0.847 - - nucleolar protein 11 [Source:ZFIN;Acc:ZDB-GENE-030131-419]
97. mta2 ENSDARG00000013031 2932 0.846 - - - - - - 0.846 - - metastasis associated 1 family, member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4803]
98. mmp9 ENSDARG00000042816 298 0.846 - 0.846 - - - - - - - matrix metallopeptidase 9 [Source:ZFIN;Acc:ZDB-GENE-040426-2132]
99. CCDC181 ENSDARG00000062021 77 0.844 - - - - - - 0.844 - - coiled-coil domain containing 181 [Source:ZFIN;Acc:ZDB-GENE-060503-312]
100. ctr9 ENSDARG00000009170 1265 0.844 - - - - - - 0.844 - - CTR9 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-030131-3782]

There are 1005 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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