Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for polr2f

Gene Name Gene ID Reads Annotation
polr2f ENSDARG00000036625, ENSDARG00000110198 1330 polymerase (RNA) II (DNA directed) polypeptide F [Source:ZFIN;Acc:ZDB-GENE-040718-279]










Genes with expression patterns similar to polr2f

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. polr2f ENSDARG00000036625, ENSDARG00000110198 1330 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 polymerase (RNA) II (DNA directed) polypeptide F [Source:ZFIN;Acc:ZDB-GENE-040718-279]
2. prpf4bb ENSDARG00000040310 2260 1.622 - 0.790 - - - - 0.832 - - pre-mRNA processing factor 4Bb [Source:ZFIN;Acc:ZDB-GENE-040426-2799]
3. usp39 ENSDARG00000041908 501 1.615 - - - 0.773 - - 0.842 - - ubiquitin specific peptidase 39 [Source:ZFIN;Acc:ZDB-GENE-030131-966]
4. btbd6a ENSDARG00000076440 748 1.576 - 0.743 - - - - 0.833 - - BTB (POZ) domain containing 6a [Source:ZFIN;Acc:ZDB-GENE-080218-26]
5. c1d ENSDARG00000021112 2839 1.547 - 0.755 - - - - 0.792 - - C1D nuclear receptor corepressor [Source:ZFIN;Acc:ZDB-GENE-041024-8]
6. brd3a ENSDARG00000006527 1636 1.533 - - - - - - 0.806 0.727 - bromodomain containing 3a [Source:ZFIN;Acc:ZDB-GENE-030131-6141]
7. C7H4orf48 C7H4orf48 1455 1.517 - - - - - - - 0.751 0.766
8. rgcc ENSDARG00000035810, ENSDARG00000113601, ENSDARG00000114876, ENSDARG00000116965 3572 1.512 - 0.719 - - - - 0.793 - - regulator of cell cycle [Source:ZFIN;Acc:ZDB-GENE-040704-31]
9. xpot ENSDARG00000099652 3026 1.498 - 0.709 - - - - 0.789 - - exportin, tRNA (nuclear export receptor for tRNAs) [Source:ZFIN;Acc:ZDB-GENE-041210-4]
10. nans nans 1365 1.485 - - - - - - 0.769 - 0.716
11. CWC15 ENSDARG00000013382 8969 1.472 - 0.757 - - - - - 0.715 - CWC15 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040625-10]
12. prelid1a ENSDARG00000098671 4745 1.466 - 0.749 - - - 0.717 - - - PRELI domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1341]
13. foxk2 ENSDARG00000030583 2982 1.464 - 0.717 - - - - - 0.747 - forkhead box K2 [Source:ZFIN;Acc:ZDB-GENE-030131-2861]
14. gpatch4 ENSDARG00000091931 923 1.463 0.726 0.737 - - - - - - - G patch domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-041008-158]
15. chd8 ENSDARG00000075543, ENSDARG00000111419 663 1.432 - - - 0.730 - - - 0.702 - chromodomain helicase DNA binding protein 8 [Source:ZFIN;Acc:ZDB-GENE-030131-6320]
16. six2a ENSDARG00000058004, ENSDARG00000115214 414 1.428 - 0.722 - 0.706 - - - - - SIX homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-010412-1]
17. gcdh gcdh 1390 0.918 - 0.918 - - - - - - -
18. DUSP23_1 DUSP23_1 1085 0.913 - 0.913 - - - - - - -
19. galnt1 ENSDARG00000061335 1648 0.896 - - - - - - 0.896 - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2360]
20. tuft1b ENSDARG00000071010 909 0.883 - - - - - - 0.883 - - tuftelin 1b [Source:ZFIN;Acc:ZDB-GENE-060503-150]
21. tada2b ENSDARG00000003769 507 0.876 - - - - - - 0.876 - - transcriptional adaptor 2B [Source:ZFIN;Acc:ZDB-GENE-050522-557]
22. sgk2b ENSDARG00000006598 1039 0.872 - 0.872 - - - - - - - serum/glucocorticoid regulated kinase 2b [Source:ZFIN;Acc:ZDB-GENE-060929-44]
23. sdf2l1 ENSDARG00000035631 615 0.87 - - - - - - 0.870 - - stromal cell-derived factor 2-like 1 [Source:ZFIN;Acc:ZDB-GENE-040808-46]
24. ptbp2b ENSDARG00000015901 2458 0.867 - 0.867 - - - - - - - polypyrimidine tract binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-060810-49]
25. srsf2b ENSDARG00000103893 1437 0.862 - 0.862 - - - - - - - serine/arginine-rich splicing factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-2420]
26. clasp2 ENSDARG00000020345 3382 0.861 - 0.861 - - - - - - - cytoplasmic linker associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2343]
27. cnot6 cnot6 7029 0.861 - - - - - - 0.861 - -
28. htatip htatip 1553 0.861 - - - - - - 0.861 - -
29. snrpb2 ENSDARG00000039424 1597 0.852 - - - - - - 0.852 - - small nuclear ribonucleoprotein polypeptide B2 [Source:ZFIN;Acc:ZDB-GENE-060616-2]
30. dnttip2 ENSDARG00000057648 2381 0.85 - 0.850 - - - - - - - deoxynucleotidyltransferase, terminal, interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080513-5]
31. NDST1 NDST1 1584 0.844 - - - - - 0.844 - - -
32. polr2j ENSDARG00000035146 1493 0.842 - - - - - - 0.842 - - polymerase (RNA) II (DNA directed) polypeptide J [Source:ZFIN;Acc:ZDB-GENE-050522-120]
33. llgl1 ENSDARG00000009693 4205 0.839 - 0.839 - - - - - - - lethal giant larvae homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-060825-69]
34. src ENSDARG00000008107 3643 0.835 - 0.835 - - - - - - - v-src avian sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-030131-3809]
35. e2f7 ENSDARG00000008986 1439 0.832 - - - - - - 0.832 - - E2F transcription factor 7 [Source:ZFIN;Acc:ZDB-GENE-030131-3527]
36. pop7 ENSDARG00000036394 1684 0.832 - - - - - - 0.832 - - POP7 homolog, ribonuclease P/MRP subunit [Source:ZFIN;Acc:ZDB-GENE-041010-88]
37. si:ch73-46j18.5 ENSDARG00000092467 6002 0.828 - - - - - - 0.828 - - si:ch73-46j18.5 [Source:ZFIN;Acc:ZDB-GENE-030131-7892]
38. hoxc6a ENSDARG00000070343 2839 0.826 - 0.826 - - - - - - - homeobox C6a [Source:ZFIN;Acc:ZDB-GENE-990415-113]
39. oafa ENSDARG00000075851 2015 0.825 - 0.825 - - - - - - - OAF homolog a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-090917-1]
40. xpo1b ENSDARG00000063229 2529 0.825 - 0.825 - - - - - - - exportin 1 (CRM1 homolog, yeast) b [Source:ZFIN;Acc:ZDB-GENE-070530-6]
41. sgcg_1 ENSDARG00000038107 1998 0.824 - 0.824 - - - - - - - sarcoglycan, gamma [Source:ZFIN;Acc:ZDB-GENE-030724-2]
42. appbp2 ENSDARG00000007566 1961 0.822 - - - - - - 0.822 - - amyloid beta precursor protein (cytoplasmic tail) binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1715]
43. spopla ENSDARG00000010563 775 0.822 - - - 0.822 - - - - - speckle-type POZ protein-like a [Source:ZFIN;Acc:ZDB-GENE-050320-3]
44. spcs2 ENSDARG00000042823 10032 0.821 - - - - - - 0.821 - - signal peptidase complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-050320-32]
45. pnkd ENSDARG00000071032 447 0.821 - - - - - - 0.821 - - PNKD, MBL domain containing [Source:ZFIN;Acc:ZDB-GENE-050208-278]
46. daxx ENSDARG00000000729 734 0.82 - - - 0.820 - - - - - death-domain associated protein [Source:ZFIN;Acc:ZDB-GENE-010110-3]
47. ubald1b ENSDARG00000020976 1162 0.818 - 0.818 - - - - - - - UBA-like domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-050522-446]
48. taf13 ENSDARG00000070834, ENSDARG00000109314 1982 0.818 - - - - - - 0.818 - - TATA-box binding protein associated factor 13 [Source:ZFIN;Acc:ZDB-GENE-030131-2873]
49. C5HXorf56 C5HXorf56 880 0.818 - 0.818 - - - - - - -
50. prpf6 ENSDARG00000091367 1868 0.818 - - - - - - 0.818 - - PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-2575]
51. ISCA2 ENSDARG00000038154 489 0.817 - 0.817 - - - - - - - iron-sulfur cluster assembly 2 [Source:ZFIN;Acc:ZDB-GENE-131121-486]
52. nkx3-1 ENSDARG00000078280 1205 0.815 - 0.815 - - - - - - - NK3 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-081104-238]
53. mkrn1 ENSDARG00000041665 578 0.813 - - - - - - - - 0.813 makorin, ring finger protein, 1 [Source:ZFIN;Acc:ZDB-GENE-020213-1]
54. stxbp3 ENSDARG00000008142 2604 0.813 - 0.813 - - - - - - - syntaxin binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2833]
55. C3H17orf103 C3H17orf103 973 0.812 - 0.812 - - - - - - -
56. psmd11b ENSDARG00000005134 4242 0.811 - 0.811 - - - - - - - proteasome 26S subunit, non-ATPase 11b [Source:ZFIN;Acc:ZDB-GENE-030131-984]
57. syncripl ENSDARG00000026723 3889 0.81 - 0.810 - - - - - - - synaptotagmin binding, cytoplasmic RNA interacting protein, like [Source:ZFIN;Acc:ZDB-GENE-030131-3104]
58. ptprfa ENSDARG00000103479 1250 0.809 - - - - - - 0.809 - - protein tyrosine phosphatase, receptor type, f, a [Source:ZFIN;Acc:ZDB-GENE-020107-2]
59. hnrnph1 ENSDARG00000040881 304 0.809 - 0.809 - - - - - - - heterogeneous nuclear ribonucleoprotein H1 [Source:ZFIN;Acc:ZDB-GENE-040426-1856]
60. nsd1a ENSDARG00000060016 2974 0.809 - - - - - - 0.809 - - nuclear receptor binding SET domain protein 1a [Source:ZFIN;Acc:ZDB-GENE-080519-3]
61. tmx1 ENSDARG00000019487 1129 0.808 - 0.808 - - - - - - - thioredoxin-related transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2327]
62. phrf1 ENSDARG00000075252 1982 0.808 - - - - - - 0.808 - - PHD and ring finger domains 1 [Source:ZFIN;Acc:ZDB-GENE-030131-624]
63. SNORD33 SNORD33 3284 0.808 - 0.808 - - - - - - -
64. jmjd7 ENSDARG00000035546 222 0.808 - - - - - 0.808 - - - jumonji domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-050417-86]
65. COX20 ENSDARG00000099997 1451 0.808 - 0.808 - - - - - - - cytochrome c oxidase assembly factor COX20 [Source:ZFIN;Acc:ZDB-GENE-040718-467]
66. gabpa ENSDARG00000069289, ENSDARG00000110923 1536 0.806 - - - - - - 0.806 - - GA binding protein transcription factor subunit alpha [Source:ZFIN;Acc:ZDB-GENE-011010-2]
67. smfn ENSDARG00000009806 1280 0.804 - 0.804 - - - - - - - small fragment nuclease [Source:ZFIN;Acc:ZDB-GENE-040426-1709]
68. nrp2b ENSDARG00000038446 783 0.804 - 0.804 - - - - - - - neuropilin 2b [Source:ZFIN;Acc:ZDB-GENE-040611-3]
69. cyth1a ENSDARG00000005159, ENSDARG00000076742 2796 0.803 - 0.803 - - - - - - - cytohesin 1a [Source:ZFIN;Acc:ZDB-GENE-030131-657]
70. ddx51 ENSDARG00000025854 691 0.803 - 0.803 - - - - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 51 [Source:ZFIN;Acc:ZDB-GENE-040927-28]
71. coa3 coa3 1423 0.803 - 0.803 - - - - - - -
72. ddx23 ENSDARG00000021945, ENSDARG00000116153 2265 0.802 - 0.802 - - - - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Source:ZFIN;Acc:ZDB-GENE-030131-6215]
73. PLEKHG1 2100 0.802 - - - - - - 0.802 - - pleckstrin homology and RhoGEF domain containing G1, transcript variant X2
74. acat1 ENSDARG00000045888 1488 0.802 - 0.802 - - - - - - - acetyl-CoA acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040808-68]
75. dennd5a ENSDARG00000017006 3426 0.801 - - - - - - 0.801 - - DENN/MADD domain containing 5A [Source:ZFIN;Acc:ZDB-GENE-071211-1]
76. pcnx 689 0.801 - 0.801 - - - - - - - pecanex homolog (Drosophila), transcript variant X5
77. sdf2 ENSDARG00000024026 805 0.8 - 0.800 - - - - - - - stromal cell-derived factor 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8823]
78. ube2e2 ENSDARG00000034670 5918 0.8 - - - - - - 0.800 - - ubiquitin-conjugating enzyme E2E 2 [Source:ZFIN;Acc:ZDB-GENE-040801-237]
79. usp37 ENSDARG00000040990 637 0.8 - - - 0.800 - - - - - ubiquitin specific peptidase 37 [Source:ZFIN;Acc:ZDB-GENE-061013-802]
80. dnajc1 ENSDARG00000001940 2848 0.8 - 0.800 - - - - - - - DnaJ (Hsp40) homolog, subfamily C, member 1 [Source:ZFIN;Acc:ZDB-GENE-061103-529]
81. pagr1 ENSDARG00000076966 1430 0.799 - - - 0.799 - - - - - PAXIP1 associated glutamate-rich protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4801]
82. rtn3_1 ENSDARG00000091348 3290 0.799 - - - - - - 0.799 - - reticulon 3 [Source:ZFIN;Acc:ZDB-GENE-030710-5]
83. wdr76 ENSDARG00000053554, ENSDARG00000115151 813 0.798 - 0.798 - - - - - - - WD repeat domain 76 [Source:ZFIN;Acc:ZDB-GENE-030131-4513]
84. mta2 ENSDARG00000013031 2932 0.798 - - - - - - - 0.798 - metastasis associated 1 family, member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4803]
85. NIPBL NIPBL 871 0.797 - - - - - - 0.797 - -
86. pane1 ENSDARG00000024681 866 0.797 - - - - - - 0.797 - - proliferation associated nuclear element [Source:ZFIN;Acc:ZDB-GENE-040611-4]
87. ankrd28b ENSDARG00000009023 960 0.797 - 0.797 - - - - - - - ankyrin repeat domain 28b [Source:ZFIN;Acc:ZDB-GENE-070622-4]
88. PATZ1 ENSDARG00000076584 1116 0.795 - - - 0.795 - - - - - POZ (BTB) and AT hook containing zinc finger 1 [Source:ZFIN;Acc:ZDB-GENE-111223-4]
89. pcid2 ENSDARG00000013802 1596 0.795 - - - - - 0.795 - - - PCI domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-041114-79]
90. pomgnt1 ENSDARG00000052025, ENSDARG00000111516 983 0.794 - - - - - - 0.794 - - protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-) [Source:ZFIN;Acc:ZDB-GENE-070112-991]
91. ddx39b ENSDARG00000036069 1151 0.794 - 0.794 - - - - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B [Source:ZFIN;Acc:ZDB-GENE-040426-1259]
92. si:ch73-367f21.4 ENSDARG00000071097 862 0.794 - - - - - - - - 0.794 si:ch73-367f21.4 [Source:ZFIN;Acc:ZDB-GENE-120214-27]
93. chek1 ENSDARG00000104765 1029 0.793 - 0.793 - - - - - - - checkpoint kinase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-896]
94. setd8b 2528 0.793 - 0.793 - - - - - - - SET domain containing (lysine methyltransferase) 8b
95. ube2j2 ENSDARG00000061161 844 0.792 - 0.792 - - - - - - - ubiquitin-conjugating enzyme E2, J2 (UBC6 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-070410-28]
96. acin1b ENSDARG00000026842 3806 0.791 - - - - - - 0.791 - - apoptotic chromatin condensation inducer 1b [Source:ZFIN;Acc:ZDB-GENE-030826-12]
97. tbl1xr1b ENSDARG00000008966 2203 0.79 - 0.790 - - - - - - - transducin (beta)-like 1 X-linked receptor 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1192]
98. atpaf1 ENSDARG00000042799 1309 0.79 - - - - - - 0.790 - - ATP synthase mitochondrial F1 complex assembly factor 1 [Source:ZFIN;Acc:ZDB-GENE-030219-10]
99. commd3 ENSDARG00000045402 1601 0.789 - 0.789 - - - - - - - COMM domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-041219-3]
100. slc4a1ap ENSDARG00000034160 749 0.789 - 0.789 - - - - - - - solute carrier family 4 (anion exchanger), member 1, adaptor protein [Source:ZFIN;Acc:ZDB-GENE-080521-2]

There are 523 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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