Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for polr2d

Gene Name Gene ID Reads Annotation
polr2d ENSDARG00000076509 3386 polymerase (RNA) II (DNA directed) polypeptide D [Source:ZFIN;Acc:ZDB-GENE-040714-2]










Genes with expression patterns similar to polr2d

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. polr2d ENSDARG00000076509 3386 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 polymerase (RNA) II (DNA directed) polypeptide D [Source:ZFIN;Acc:ZDB-GENE-040714-2]
2. u2af1 ENSDARG00000015325 3217 2.988 - - - 0.774 - - 0.743 0.745 0.726 U2 small nuclear RNA auxiliary factor 1 [Source:ZFIN;Acc:ZDB-GENE-020419-1]
3. tma7 ENSDARG00000071670 13372 2.883 - - - 0.726 - - 0.728 0.715 0.714 translation machinery associated 7 homolog [Source:ZFIN;Acc:ZDB-GENE-061027-176]
4. dnajc5aa ENSDARG00000042948 2885 2.679 - 0.996 0.921 - - - - - 0.762 DnaJ (Hsp40) homolog, subfamily C, member 5aa [Source:ZFIN;Acc:ZDB-GENE-031113-20]
5. hexim1 ENSDARG00000036482 4317 2.53 - - 0.946 - - - 0.855 0.729 - hexamethylene bis-acetamide inducible 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4637]
6. hnrnpd ENSDARG00000059246, ENSDARG00000109297, ENSDARG00000113453 3440 2.525 - - 0.945 - 0.794 - 0.786 - - heterogeneous nuclear ribonucleoprotein D [Source:ZFIN;Acc:ZDB-GENE-070424-97]
7. C1H7orf55 C1H7orf55 2552 2.478 - 0.998 - - - 0.711 0.769 - -
8. PLEKHG1 2100 2.454 - 0.998 0.724 - 0.732 - - - - pleckstrin homology and RhoGEF domain containing G1, transcript variant X2
9. lmnb1 ENSDARG00000044299 9817 2.438 0.763 - 0.813 - - - 0.862 - - lamin B1 [Source:ZFIN;Acc:ZDB-GENE-020424-2]
10. dut ENSDARG00000106529 3120 2.416 - - 0.923 - 0.719 - 0.774 - - deoxyuridine triphosphatase [Source:ZFIN;Acc:ZDB-GENE-041010-93]
11. MSL1_1 MSL1_1 2365 2.41 - - 0.952 - 0.755 - 0.703 - -
12. ewsr1a ENSDARG00000020258, ENSDARG00000113252 11221 2.298 - - 0.825 - - - 0.724 - 0.749 EWS RNA-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2317]
13. rtf1 ENSDARG00000008947 6596 2.289 - - 0.842 - 0.746 - - - 0.701 RTF1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-030131-6778]
14. sin3b ENSDARG00000062472 2025 2.202 - - - - - - 0.725 0.773 0.704 SIN3 transcription regulator family member B [Source:ZFIN;Acc:ZDB-GENE-030131-8264]
15. sfpq ENSDARG00000011564, ENSDARG00000115611 15626 2.195 - - - 0.744 - - 0.729 - 0.722 splicing factor proline/glutamine-rich [Source:ZFIN;Acc:ZDB-GENE-040426-2452]
16. slbp ENSDARG00000100558 3405 2.187 - - - 0.786 0.700 - - 0.701 - stem-loop binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-9686]
17. leo1 ENSDARG00000055357 1644 2.168 0.766 - - - 0.701 - - 0.701 - LEO1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-040426-2435]
18. lima1 lima1 4760 1.959 - 0.997 0.962 - - - - - -
19. pard6b ENSDARG00000003865 990 1.958 - 0.998 0.960 - - - - - - par-6 partitioning defective 6 homolog beta (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-090312-133]
20. sipa1l2 ENSDARG00000061640 4545 1.944 - 0.999 0.945 - - - - - - signal-induced proliferation-associated 1 like 2 [Source:ZFIN;Acc:ZDB-GENE-050208-66]
21. myo1eb ENSDARG00000009133, ENSDARG00000109491 2396 1.941 - 0.972 0.969 - - - - - - myosin IE, b [Source:ZFIN;Acc:ZDB-GENE-040426-1347]
22. zic2a ENSDARG00000015554 2860 1.837 - 0.998 0.839 - - - - - - zic family member 2 (odd-paired homolog, Drosophila), a [Source:ZFIN;Acc:ZDB-GENE-000710-4]
23. wasf3 wasf3 3287 1.782 - 0.998 - - 0.784 - - - -
24. ccne2 ENSDARG00000098529 4695 1.761 0.764 0.997 - - - - - - - cyclin E2 [Source:ZFIN;Acc:ZDB-GENE-030131-9689]
25. safb ENSDARG00000020467 5608 1.761 - - 0.940 - - - - - 0.821 scaffold attachment factor B [Source:ZFIN;Acc:ZDB-GENE-030131-698]
26. zgc:110329 ENSDARG00000035532, ENSDARG00000110423 2229 1.759 - - 0.964 - - - - - 0.795 zgc:110329 [Source:ZFIN;Acc:ZDB-GENE-050417-334]
27. zranb2 ENSDARG00000044332 6723 1.753 - - 0.978 - - - - - 0.775 zinc finger, RAN-binding domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2743]
28. denr ENSDARG00000037229 8370 1.749 - 0.966 - - - - 0.783 - - density-regulated protein [Source:ZFIN;Acc:ZDB-GENE-040718-450]
29. ivns1abpb ENSDARG00000013946 1972 1.736 - 0.972 - - 0.764 - - - - influenza virus NS1A binding protein b [Source:ZFIN;Acc:ZDB-GENE-030131-6266]
30. skp1 ENSDARG00000003151 8172 1.735 - 0.990 - - - - - - 0.745 S-phase kinase-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1707]
31. arhgap1 ENSDARG00000024324 6904 1.732 - 0.995 - - - - - - 0.737 Rho GTPase activating protein 1 [Source:ZFIN;Acc:ZDB-GENE-050417-305]
32. dynll2a ENSDARG00000069790, ENSDARG00000114539 2328 1.732 - 0.997 - - 0.735 - - - - dynein, light chain, LC8-type 2a [Source:ZFIN;Acc:ZDB-GENE-030828-11]
33. hadhab ENSDARG00000060594 3664 1.73 0.792 - 0.938 - - - - - - hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha b [Source:ZFIN;Acc:ZDB-GENE-041111-204]
34. hsbp1a ENSDARG00000069425 1086 1.729 - - 0.972 - - - - 0.757 - heat shock factor binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050320-136]
35. arl6ip4 ENSDARG00000105036, ENSDARG00000110324, ENSDARG00000116805 1142 1.727 - - 0.971 - - - - 0.756 - ADP-ribosylation factor-like 6 interacting protein 4 [Source:ZFIN;Acc:ZDB-GENE-050522-405]
36. brap ENSDARG00000008560 821 1.721 0.754 - 0.967 - - - - - - BRCA1 associated protein [Source:ZFIN;Acc:ZDB-GENE-040718-168]
37. rrp1 ENSDARG00000103337 2366 1.719 - 0.997 - - - - 0.722 - - ribosomal RNA processing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9837]
38. ebna1bp2 ENSDARG00000054980 4621 1.718 - 0.995 - - - - 0.723 - - EBNA1 binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6989]
39. sltm ENSDARG00000052728 6234 1.71 - - 0.972 - - - 0.738 - - SAFB-like, transcription modulator [Source:ZFIN;Acc:ZDB-GENE-040426-2647]
40. lzts2a ENSDARG00000074597, ENSDARG00000113794 7477 1.708 - 0.994 - - - 0.714 - - - leucine zipper, putative tumor suppressor 2a [Source:ZFIN;Acc:ZDB-GENE-090313-276]
41. WDR83OS ENSDARG00000025554 7117 1.701 - 0.976 - - - - 0.725 - - WD repeat domain 83 opposite strand [Source:ZFIN;Acc:ZDB-GENE-040426-1674]
42. mccc2 ENSDARG00000017571 5635 1.701 0.765 - 0.936 - - - - - - methylcrotonoyl-CoA carboxylase 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-040426-2493]
43. fbl ENSDARG00000053912 5891 1.7 - - 0.957 - - - - 0.743 - fibrillarin [Source:ZFIN;Acc:ZDB-GENE-040426-1936]
44. htatsf1 ENSDARG00000056649 2018 1.699 - - 0.956 - - - 0.743 - - HIV-1 Tat specific factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1578]
45. GIGYF1_1 GIGYF1_1 1865 1.695 - - 0.957 - - - 0.738 - -
46. tfap4 ENSDARG00000103923 2203 1.69 - - 0.951 - 0.739 - - - - transcription factor AP-4 (activating enhancer binding protein 4) [Source:ZFIN;Acc:ZDB-GENE-090810-1]
47. CABZ01087568.1 CABZ01087568.1 1487 1.689 0.717 - 0.972 - - - - - -
48. gdi2 ENSDARG00000005451, ENSDARG00000113039 11258 1.689 - 0.940 - - 0.749 - - - - GDP dissociation inhibitor 2 [Source:ZFIN;Acc:ZDB-GENE-030131-2485]
49. tmem50a ENSDARG00000015757 3244 1.688 - - 0.975 - - - 0.713 - - transmembrane protein 50A [Source:ZFIN;Acc:ZDB-GENE-040426-2937]
50. TUBGCP6 1991 1.684 - - 0.965 - 0.719 - - - - tubulin, gamma complex associated protein 6
51. nap1l4b ENSDARG00000068868 3285 1.684 - - 0.955 - - 0.729 - - - nucleosome assembly protein 1-like 4b [Source:ZFIN;Acc:ZDB-GENE-041114-168]
52. xpo1b ENSDARG00000063229 2529 1.68 - - 0.955 - 0.725 - - - - exportin 1 (CRM1 homolog, yeast) b [Source:ZFIN;Acc:ZDB-GENE-070530-6]
53. crkl ENSDARG00000028699 2966 1.674 - - 0.946 - - - 0.728 - - v-crk avian sarcoma virus CT10 oncogene homolog-like [Source:ZFIN;Acc:ZDB-GENE-040426-2951]
54. rpl7l1 ENSDARG00000042864 3256 1.672 - - 0.956 - - - - - 0.716 ribosomal protein L7-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-970]
55. ndufs7 ENSDARG00000074552, ENSDARG00000111455 10753 1.67 - 0.926 0.744 - - - - - - NADH:ubiquinone oxidoreductase core subunit S7 [Source:ZFIN;Acc:ZDB-GENE-041111-261]
56. rbm25 rbm25 3629 1.67 - - 0.911 - - - - - 0.759
57. mgaa ENSDARG00000078784 1344 1.669 - - 0.959 - 0.710 - - - - MGA, MAX dimerization protein a [Source:ZFIN;Acc:ZDB-GENE-030603-1]
58. pbx2 ENSDARG00000019717 6892 1.663 - - 0.858 - - - 0.805 - - pre-B-cell leukemia homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-000405-5]
59. ssbp4 ENSDARG00000056483 10196 1.662 - - 0.898 - - - - 0.764 - single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
60. pfn2l ENSDARG00000012682 21690 1.662 - 0.873 - - - - 0.789 - - profilin 2 like [Source:ZFIN;Acc:ZDB-GENE-030131-34]
61. acadvl ENSDARG00000016687 5329 1.657 - - 0.944 - - - 0.713 - - acyl-CoA dehydrogenase very long chain [Source:ZFIN;Acc:ZDB-GENE-030131-899]
62. gigfy2 3194 1.656 - - 0.950 - 0.706 - - - - GRB10 interacting GYF protein 2, transcript variant X1
63. ctsf ENSDARG00000063095 4564 1.645 - - 0.924 - 0.721 - - - - cathepsin F [Source:ZFIN;Acc:ZDB-GENE-030131-9831]
64. snx12 ENSDARG00000019060 9563 1.643 - - 0.938 - - - 0.705 - - sorting nexin 12 [Source:ZFIN;Acc:ZDB-GENE-040426-787]
65. pnisr ENSDARG00000069855, ENSDARG00000116449 3465 1.641 0.701 - 0.940 - - - - - - PNN-interacting serine/arginine-rich protein [Source:ZFIN;Acc:ZDB-GENE-030131-362]
66. lsm7 ENSDARG00000058328 7191 1.638 0.789 - 0.849 - - - - - - LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-030131-8284]
67. cox6c ENSDARG00000038577 16845 1.631 - 0.927 - - - - 0.704 - - cytochrome c oxidase subunit 6C [Source:ZFIN;Acc:ZDB-GENE-040724-95]
68. peli1b ENSDARG00000044083, ENSDARG00000112797 3801 1.63 - - 0.892 - - - - - 0.738 pellino E3 ubiquitin protein ligase 1b [Source:ZFIN;Acc:ZDB-GENE-061027-372]
69. lypla2 ENSDARG00000053656 8971 1.63 - - 0.852 - - - 0.778 - - lysophospholipase II [Source:ZFIN;Acc:ZDB-GENE-040426-1715]
70. rerea ENSDARG00000077353 4162 1.63 0.855 - - - - - 0.775 - - arginine-glutamic acid dipeptide (RE) repeats a [Source:ZFIN;Acc:ZDB-GENE-060718-1]
71. prdx1 ENSDARG00000058734 4582 1.626 - - 0.879 - - - 0.747 - - peroxiredoxin 1 [Source:ZFIN;Acc:ZDB-GENE-050320-35]
72. pum1 ENSDARG00000099256 5017 1.622 - - 0.877 - - - 0.745 - - pumilio RNA-binding family member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2074]
73. rpl5a ENSDARG00000020197 35209 1.615 - 0.814 - - 0.801 - - - - ribosomal protein L5a [Source:ZFIN;Acc:ZDB-GENE-030131-5161]
74. rpa1 ENSDARG00000003938 4403 1.614 - 0.861 - 0.753 - - - - - replication protein A1 [Source:ZFIN;Acc:ZDB-GENE-030912-3]
75. atp2b4 5891 1.613 - - 0.839 - - - 0.774 - - ATPase, Ca++ transporting, plasma membrane 4
76. acin1b ENSDARG00000026842 3806 1.611 - - - - - 0.878 0.733 - - apoptotic chromatin condensation inducer 1b [Source:ZFIN;Acc:ZDB-GENE-030826-12]
77. igf1ra ENSDARG00000027423, ENSDARG00000113936, ENSDARG00000116846 2228 1.61 0.823 - - - - - 0.787 - - insulin-like growth factor 1a receptor [Source:ZFIN;Acc:ZDB-GENE-020503-1]
78. uchl5 ENSDARG00000103404, ENSDARG00000110434 4029 1.59 - - 0.862 - - - 0.728 - - ubiquitin carboxyl-terminal hydrolase L5 [Source:ZFIN;Acc:ZDB-GENE-040426-2051]
79. eif4h ENSDARG00000042252 6742 1.583 - - 0.832 - - - - - 0.751 eukaryotic translation initiation factor 4h [Source:ZFIN;Acc:ZDB-GENE-010328-19]
80. ppih ENSDARG00000041530 2085 1.58 0.801 - - - - - - 0.779 - peptidylprolyl isomerase H (cyclophilin H) [Source:ZFIN;Acc:ZDB-GENE-040625-127]
81. si:dkey-286j15.1 ENSDARG00000040864 1718 1.579 - - - - - - 0.827 - 0.752 si:dkey-286j15.1 [Source:ZFIN;Acc:ZDB-GENE-060503-447]
82. kdm5c ENSDARG00000006124 4389 1.578 - - 0.866 - 0.712 - - - - lysine (K)-specific demethylase 5C [Source:ZFIN;Acc:ZDB-GENE-060810-94]
83. gfer ENSDARG00000070061 1119 1.577 0.801 - - - - - 0.776 - - growth factor, augmenter of liver regeneration (ERV1 homolog, S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060810-186]
84. eif3m ENSDARG00000013931 8117 1.561 - - 0.850 - - - 0.711 - - eukaryotic translation initiation factor 3, subunit M [Source:ZFIN;Acc:ZDB-GENE-040426-2643]
85. pdap1a ENSDARG00000092546, ENSDARG00000116115 7617 1.56 - - - - - - 0.849 - 0.711 pdgfa associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1693]
86. SERBP1 SERBP1 9276 1.558 - - 0.811 - - 0.747 - - -
87. FAM168B ENSDARG00000101733, ENSDARG00000113953, ENSDARG00000115746 2175 1.554 - - - - - 0.786 - - 0.768 family with sequence similarity 168, member B [Source:ZFIN;Acc:ZDB-GENE-060929-180]
88. tnrc6b ENSDARG00000074161 4597 1.554 - 0.840 - - - - - - 0.714 trinucleotide repeat containing 6b [Source:ZFIN;Acc:ZDB-GENE-030131-13]
89. snrpe ENSDARG00000033175 7462 1.548 - - - - - 0.755 0.793 - - small nuclear ribonucleoprotein polypeptide E [Source:ZFIN;Acc:ZDB-GENE-040426-1112]
90. brd3b ENSDARG00000100129 6387 1.545 - - - - - 0.795 0.750 - - bromodomain containing 3b [Source:ZFIN;Acc:ZDB-GENE-030131-5316]
91. akirin2 ENSDARG00000058729 13245 1.544 0.783 - - - - - 0.761 - - akirin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2944]
92. TAF15 ENSDARG00000070019 5102 1.544 - - - - - - - 0.782 0.762 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-061215-102]
93. phf20b ENSDARG00000038737, ENSDARG00000111662, ENSDARG00000116554 1385 1.541 0.801 - - - - - - - 0.740 PHD finger protein 20, b [Source:ZFIN;Acc:ZDB-GENE-040822-33]
94. srsf3a ENSDARG00000025397, ENSDARG00000100815 11622 1.539 - - - - - - 0.834 0.705 - serine/arginine-rich splicing factor 3a [Source:ZFIN;Acc:ZDB-GENE-030616-631]
95. polr2j ENSDARG00000035146 1493 1.538 - - - - - 0.761 0.777 - - polymerase (RNA) II (DNA directed) polypeptide J [Source:ZFIN;Acc:ZDB-GENE-050522-120]
96. zeb2a ENSDARG00000062338, ENSDARG00000111349, ENSDARG00000115964 6087 1.538 - - 0.825 - 0.713 - - - - zinc finger E-box binding homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-070912-553]
97. SNRPG ENSDARG00000099667 18697 1.533 - - - - - - 0.759 - 0.774 small nuclear ribonucleoprotein polypeptide G [Source:ZFIN;Acc:ZDB-GENE-040912-105]
98. marcksa ENSDARG00000004049 2518 1.531 - - - - - - - 0.756 0.775 myristoylated alanine-rich protein kinase C substrate a [Source:ZFIN;Acc:ZDB-GENE-050522-145]
99. max ENSDARG00000024844 6035 1.529 - - - - 0.758 - - - 0.771 myc associated factor X [Source:ZFIN;Acc:ZDB-GENE-990415-152]
100. srsf7a ENSDARG00000035325, ENSDARG00000110705 11788 1.529 - - - - - - - 0.751 0.778 serine/arginine-rich splicing factor 7a [Source:ZFIN;Acc:ZDB-GENE-040426-1798]

There are 1276 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA