Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for polr1e

Gene Name Gene ID Reads Annotation
polr1e ENSDARG00000006434, ENSDARG00000113920 770 RNA polymerase I subunit E [Source:ZFIN;Acc:ZDB-GENE-050522-251]










Genes with expression patterns similar to polr1e

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. polr1e ENSDARG00000006434, ENSDARG00000113920 770 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RNA polymerase I subunit E [Source:ZFIN;Acc:ZDB-GENE-050522-251]
2. clcn5 clcn5 492 1.729 - 0.981 - - 0.748 - - - -
3. cttnbp2 ENSDARG00000040991 1697 1.71 0.715 0.995 - - - - - - - cortactin binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8134]
4. ehd3 ENSDARG00000007869 3238 1.64 - 0.924 - - - - 0.716 - - EH-domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-041014-352]
5. pfdn4 ENSDARG00000061228 8266 1.608 - 0.906 - - - - 0.702 - - prefoldin subunit 4 [Source:ZFIN;Acc:ZDB-GENE-100922-122]
6. eno1a ENSDARG00000022456, ENSDARG00000116458 14401 1.572 - 0.847 - - - - 0.725 - - enolase 1a, (alpha) [Source:ZFIN;Acc:ZDB-GENE-030131-6048]
7. tsen15 ENSDARG00000069280 240 1.538 - - - - 0.788 0.750 - - - TSEN15 tRNA splicing endonuclease subunit [Source:ZFIN;Acc:ZDB-GENE-041008-211]
8. snapc3 ENSDARG00000101474 367 1.524 - - - - 0.754 - 0.770 - - small nuclear RNA activating complex, polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-040426-971]
9. znf395_1 znf395_1 342 1.504 0.766 - - - - - 0.738 - -
10. haus3 ENSDARG00000061385, ENSDARG00000110959 343 1.416 - - - - - 0.704 0.712 - - HAUS augmin-like complex, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-060929-592]
11. DUSP28 ENSDARG00000059695 1135 0.999 - 0.999 - - - - - - - dual specificity phosphatase 28 [Source:ZFIN;Acc:ZDB-GENE-131127-257]
12. tox4 tox4 1671 0.999 - 0.999 - - - - - - -
13. mis18a ENSDARG00000035333 555 0.998 - 0.998 - - - - - - - MIS18 kinetochore protein A [Source:ZFIN;Acc:ZDB-GENE-091204-314]
14. ptk6a ENSDARG00000017947 682 0.998 - 0.998 - - - - - - - PTK6 protein tyrosine kinase 6a [Source:ZFIN;Acc:ZDB-GENE-081105-117]
15. dhrs9 ENSDARG00000019260 250 0.998 - 0.998 - - - - - - - dehydrogenase/reductase (SDR family) member 9 [Source:ZFIN;Acc:ZDB-GENE-030131-1249]
16. scn3b ENSDARG00000062359 242 0.998 - 0.998 - - - - - - - sodium channel, voltage-gated, type III, beta [Source:ZFIN;Acc:ZDB-GENE-070920-2]
17. ubn2 ubn2 534 0.998 - 0.998 - - - - - - -
18. prr12a ENSDARG00000074229 1668 0.998 - 0.998 - - - - - - - proline rich 12a [Source:ZFIN;Acc:ZDB-GENE-041111-223]
19. THSD1 ENSDARG00000075273, ENSDARG00000112294 228 0.998 - 0.998 - - - - - - - thrombospondin, type I, domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100105-3]
20. ptpn9a ENSDARG00000077495 2295 0.998 - 0.998 - - - - - - - protein tyrosine phosphatase, non-receptor type 9, a [Source:ZFIN;Acc:ZDB-GENE-101027-1]
21. SETDB2 ENSDARG00000101462 249 0.998 - 0.998 - - - - - - - SET domain, bifurcated 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7093]
22. acadsb ENSDARG00000076780 2382 0.998 - 0.998 - - - - - - - acyl-CoA dehydrogenase short/branched chain [Source:ZFIN;Acc:ZDB-GENE-070410-109]
23. wipf1 wipf1 760 0.998 - 0.998 - - - - - - -
24. tpi1a ENSDARG00000025012 562 0.998 - 0.998 - - - - - - - triosephosphate isomerase 1a [Source:ZFIN;Acc:ZDB-GENE-020416-3]
25. appl1 1019 0.998 - 0.998 - - - - - - - adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1, transcript variant X1
26. pip4k2aa ENSDARG00000003776 865 0.998 - 0.998 - - - - - - - phosphatidylinositol-5-phosphate 4-kinase, type II, alpha a [Source:ZFIN;Acc:ZDB-GENE-080721-18]
27. csrnp2 ENSDARG00000075972 1650 0.998 - 0.998 - - - - - - - cysteine-serine-rich nuclear protein 2 [Source:ZFIN;Acc:ZDB-GENE-090312-137]
28. zgc:123295 ENSDARG00000056324 361 0.998 - 0.998 - - - - - - - zgc:123295 [Source:ZFIN;Acc:ZDB-GENE-051127-11]
29. ppp1r14ba ENSDARG00000044541 792 0.998 - 0.998 - - - - - - - protein phosphatase 1, regulatory (inhibitor) subunit 14Ba [Source:ZFIN;Acc:ZDB-GENE-060825-331]
30. sept8b ENSDARG00000014233 223 0.998 - 0.998 - - - - - - - septin 8b [Source:ZFIN;Acc:ZDB-GENE-070424-3]
31. si:dkey-11e23.9 ENSDARG00000095586 114 0.998 - 0.998 - - - - - - - si:dkey-11e23.9 [Source:ZFIN;Acc:ZDB-GENE-041014-301]
32. vps53 ENSDARG00000069324, ENSDARG00000116674 1130 0.997 - 0.997 - - - - - - - vacuolar protein sorting 53 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-041114-199]
33. meis4.1a meis4.1a 1165 0.997 - 0.997 - - - - - - -
34. mxra7 ENSDARG00000095300 332 0.997 - 0.997 - - - - - - - matrix-remodelling associated 7 [Source:ZFIN;Acc:ZDB-GENE-041014-95]
35. ntn1a ENSDARG00000105112, ENSDARG00000111684 2553 0.997 - 0.997 - - - - - - - netrin 1a [Source:ZFIN;Acc:ZDB-GENE-990415-169]
36. slc31a2 ENSDARG00000076092 251 0.997 - 0.997 - - - - - - - solute carrier family 31 (copper transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-030925-25]
37. nol11 ENSDARG00000026767 2528 0.997 - 0.997 - - - - - - - nucleolar protein 11 [Source:ZFIN;Acc:ZDB-GENE-030131-419]
38. KLF8 ENSDARG00000060661 219 0.997 - 0.997 - - - - - - - Kruppel-like factor 8 [Source:ZFIN;Acc:ZDB-GENE-070424-152]
39. RCSD1 RCSD1 144 0.997 - 0.997 - - - - - - -
40. pfkfb3 ENSDARG00000001953 656 0.997 - 0.997 - - - - - - - 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2724]
41. zgc:136870 ENSDARG00000054837, ENSDARG00000109282 201 0.997 - 0.997 - - - - - - - zgc:136870 [Source:ZFIN;Acc:ZDB-GENE-060312-1]
42. setd7 ENSDARG00000038858 1072 0.997 - 0.997 - - - - - - - SET domain containing (lysine methyltransferase) 7 [Source:ZFIN;Acc:ZDB-GENE-040718-156]
43. arid1ab ENSDARG00000101891 1722 0.997 - 0.997 - - - - - - - AT rich interactive domain 1Ab (SWI-like) [Source:ZFIN;Acc:ZDB-GENE-030131-5725]
44. si:ch211-218c6.8 ENSDARG00000092364 1270 0.997 - 0.997 - - - - - - - si:ch211-218c6.8 [Source:ZFIN;Acc:ZDB-GENE-050419-103]
45. lta4h ENSDARG00000006029, ENSDARG00000112240 3146 0.997 - 0.997 - - - - - - - leukotriene A4 hydrolase [Source:ZFIN;Acc:ZDB-GENE-040426-2477]
46. ube2e2 ENSDARG00000034670 5918 0.997 - 0.997 - - - - - - - ubiquitin-conjugating enzyme E2E 2 [Source:ZFIN;Acc:ZDB-GENE-040801-237]
47. C25H1orf51 C25H1orf51 2460 0.996 - 0.996 - - - - - - -
48. cnot3b ENSDARG00000019842 838 0.996 - 0.996 - - - - - - - CCR4-NOT transcription complex, subunit 3b [Source:ZFIN;Acc:ZDB-GENE-030131-5838]
49. ivd ENSDARG00000042853, ENSDARG00000112920 1526 0.996 - 0.996 - - - - - - - isovaleryl-CoA dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030616-262]
50. CHD1 ENSDARG00000103787 1645 0.996 - 0.996 - - - - - - - chromodomain helicase DNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7120]
51. stxbp5b ENSDARG00000029234 760 0.996 - 0.996 - - - - - - - syntaxin binding protein 5b (tomosyn) [Source:ZFIN;Acc:ZDB-GENE-090821-5]
52. cenpl ENSDARG00000038802 696 0.996 - 0.996 - - - - - - - centromere protein L [Source:ZFIN;Acc:ZDB-GENE-040930-6]
53. AL929204.1 AL929204.1 773 0.996 - 0.996 - - - - - - -
54. sirt1 ENSDARG00000068064 1393 0.996 - 0.996 - - - - - - - sirtuin 1 [Source:ZFIN;Acc:ZDB-GENE-070801-2]
55. ptpn4b ENSDARG00000000183 425 0.996 - 0.996 - - - - - - - protein tyrosine phosphatase, non-receptor type 4b [Source:ZFIN;Acc:ZDB-GENE-030131-6259]
56. fosl2 ENSDARG00000040623 2041 0.995 - 0.995 - - - - - - - fos-like antigen 2 [Source:ZFIN;Acc:ZDB-GENE-070209-164]
57. im:7136729 im:7136729 1625 0.995 - 0.995 - - - - - - -
58. larp1 ENSDARG00000101722 976 0.995 - 0.995 - - - - - - - La ribonucleoprotein domain family, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5386]
59. cdk11b ENSDARG00000102546 1579 0.995 - 0.995 - - - - - - - cyclin-dependent kinase 11B [Source:ZFIN;Acc:ZDB-GENE-041212-74]
60. cse1l ENSDARG00000006963 3261 0.995 - 0.995 - - - - - - - CSE1 chromosome segregation 1-like (yeast) [Source:ZFIN;Acc:ZDB-GENE-990603-1]
61. jhdm1da jhdm1da 512 0.995 - 0.995 - - - - - - -
62. nup93 ENSDARG00000003487, ENSDARG00000111433 2474 0.995 - 0.995 - - - - - - - nucleoporin 93 [Source:ZFIN;Acc:ZDB-GENE-990415-46]
63. igsf9a ENSDARG00000075864 1870 0.995 - 0.995 - - - - - - - immunoglobulin superfamily, member 9a [Source:ZFIN;Acc:ZDB-GENE-060503-288]
64. zfyve28 ENSDARG00000060430 797 0.995 - 0.995 - - - - - - - zinc finger, FYVE domain containing 28 [Source:ZFIN;Acc:ZDB-GENE-061103-208]
65. chpfa ENSDARG00000078392 1427 0.995 - 0.995 - - - - - - - chondroitin polymerizing factor a [Source:ZFIN;Acc:ZDB-GENE-100504-2]
66. pax9 ENSDARG00000053829 1193 0.994 - 0.994 - - - - - - - paired box 9 [Source:ZFIN;Acc:ZDB-GENE-980526-399]
67. mtpn ENSDARG00000104018 4264 0.994 - 0.994 - - - - - - - myotrophin [Source:ZFIN;Acc:ZDB-GENE-040426-2166]
68. GABARAPL3 GABARAPL3 1198 0.994 - 0.994 - - - - - - -
69. tnfaip2a ENSDARG00000043416 688 0.994 - 0.994 - - - - - - - tumor necrosis factor, alpha-induced protein 2a [Source:ZFIN;Acc:ZDB-GENE-041210-301]
70. lrrc23 ENSDARG00000006174 234 0.994 - 0.994 - - - - - - - leucine rich repeat containing 23 [Source:ZFIN;Acc:ZDB-GENE-041010-153]
71. tnfrsf19 ENSDARG00000041869 796 0.994 - 0.994 - - - - - - - tumor necrosis factor receptor superfamily, member 19 [Source:ZFIN;Acc:ZDB-GENE-030131-6760]
72. slc25a4 ENSDARG00000027355, ENSDARG00000112318 17542 0.994 - 0.994 - - - - - - - solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5275]
73. prrx1b ENSDARG00000042027 1128 0.993 - 0.993 - - - - - - - paired related homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9033]
74. eya3 ENSDARG00000036100 1965 0.993 - 0.993 - - - - - - - EYA transcriptional coactivator and phosphatase 3 [Source:ZFIN;Acc:ZDB-GENE-060503-864]
75. MDP1 MDP1 687 0.993 - 0.993 - - - - - - -
76. dab2ipb ENSDARG00000075110, ENSDARG00000117186 414 0.993 - 0.993 - - - - - - - DAB2 interacting protein b [Source:ZFIN;Acc:ZDB-GENE-030131-2449]
77. pds5a ENSDARG00000055022, ENSDARG00000115793 3842 0.993 - 0.993 - - - - - - - PDS5 cohesin associated factor A [Source:ZFIN;Acc:ZDB-GENE-040426-1612]
78. eny2 ENSDARG00000070046 3741 0.992 - 0.992 - - - - - - - enhancer of yellow 2 homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040718-124]
79. tsc22d1 ENSDARG00000038306 2413 0.992 - 0.992 - - - - - - - TSC22 domain family, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7785]
80. ppp2r5cb ENSDARG00000031200 1832 0.992 - 0.992 - - - - - - - protein phosphatase 2, regulatory subunit B', gamma b [Source:ZFIN;Acc:ZDB-GENE-041014-4]
81. hsd17b14 ENSDARG00000054842 1394 0.992 - 0.992 - - - - - - - hydroxysteroid (17-beta) dehydrogenase 14 [Source:ZFIN;Acc:ZDB-GENE-040801-24]
82. sp1 ENSDARG00000088347 1697 0.992 - 0.992 - - - - - - - sp1 transcription factor [Source:ZFIN;Acc:ZDB-GENE-030131-2829]
83. SKA2 ENSDARG00000114038 1448 0.992 - 0.992 - - - - - - - spindle and kinetochore associated complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-041008-202]
84. pkd2 ENSDARG00000014098 2384 0.992 - 0.992 - - - - - - - polycystic kidney disease 2 [Source:ZFIN;Acc:ZDB-GENE-040827-4]
85. nsun5 ENSDARG00000043209 764 0.992 - 0.992 - - - - - - - NOP2/Sun domain family, member 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2476]
86. BRCC3 ENSDARG00000098242 1123 0.992 - 0.992 - - - - - - - BRCA1/BRCA2-containing complex, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-100215-1]
87. rerea ENSDARG00000077353 4162 0.991 - 0.991 - - - - - - - arginine-glutamic acid dipeptide (RE) repeats a [Source:ZFIN;Acc:ZDB-GENE-060718-1]
88. rnf2 ENSDARG00000010381 3427 0.991 - 0.991 - - - - - - - ring finger protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5243]
89. si:ch211-151o1.2 si:ch211-151o1.2 3580 0.99 - 0.990 - - - - - - -
90. znhit1 ENSDARG00000054574 979 0.99 - 0.990 - - - - - - - zinc finger, HIT-type containing 1 [Source:ZFIN;Acc:ZDB-GENE-050417-272]
91. cebpa ENSDARG00000036074 751 0.989 - 0.989 - - - - - - - CCAAT enhancer binding protein alpha [Source:ZFIN;Acc:ZDB-GENE-020111-2]
92. sult1st4 ENSDARG00000003181 540 0.989 - 0.989 - - - - - - - sulfotransferase family 1, cytosolic sulfotransferase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2054]
93. tomm20a ENSDARG00000090656, ENSDARG00000103163 2029 0.989 - 0.989 - - - - - - - translocase of outer mitochondrial membrane 20 [Source:ZFIN;Acc:ZDB-GENE-040426-1976]
94. pik3r1 ENSDARG00000038524 3615 0.989 - 0.989 - - - - - - - phosphoinositide-3-kinase, regulatory subunit 1 (alpha) [Source:ZFIN;Acc:ZDB-GENE-030131-1280]
95. tango2 ENSDARG00000056550 1130 0.989 - 0.989 - - - - - - - transport and golgi organization 2 homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040808-42]
96. eif3k ENSDARG00000068289 1102 0.989 - 0.989 - - - - - - - eukaryotic translation initiation factor 3, subunit K [Source:ZFIN;Acc:ZDB-GENE-050417-45]
97. scg3 ENSDARG00000086288, ENSDARG00000115955 1587 0.988 - 0.988 - - - - - - - secretogranin III [Source:ZFIN;Acc:ZDB-GENE-040426-1725]
98. arl8a ENSDARG00000078686 4379 0.988 - 0.988 - - - - - - - ADP-ribosylation factor-like 8A [Source:ZFIN;Acc:ZDB-GENE-030131-5025]
99. igf2b ENSDARG00000033307, ENSDARG00000116125 1537 0.988 - 0.988 - - - - - - - insulin-like growth factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-2935]
100. fam20a ENSDARG00000079486 1199 0.988 - 0.988 - - - - - - - family with sequence similarity 20, member A [Source:ZFIN;Acc:ZDB-GENE-081022-117]

There are 693 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA