Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for polr1b

Gene Name Gene ID Reads Annotation
polr1b ENSDARG00000077469, ENSDARG00000115880 313 RNA polymerase I subunit B [Source:ZFIN;Acc:ZDB-GENE-040426-1598]










Genes with expression patterns similar to polr1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. polr1b ENSDARG00000077469, ENSDARG00000115880 313 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RNA polymerase I subunit B [Source:ZFIN;Acc:ZDB-GENE-040426-1598]
2. aspdh ENSDARG00000038297 39 1.831 - - - - - 0.868 0.963 - - aspartate dehydrogenase domain containing [Source:ZFIN;Acc:ZDB-GENE-040912-102]
3. GPR141_1 GPR141_1 33 1.822 0.841 - - - - 0.981 - - -
4. CU855711.1 ENSDARG00000088643 6 1.73 - - - - - 0.821 0.909 - - legumain-like [Source:NCBI gene;Acc:108191752]
5. zgc:172133 ENSDARG00000075248 6 1.728 0.819 - - - - - 0.909 - - zgc:172133 [Source:ZFIN;Acc:ZDB-GENE-080204-48]
6. urgcp ENSDARG00000036767 6 1.728 0.819 - - - - - 0.909 - - upregulator of cell proliferation [Source:ZFIN;Acc:ZDB-GENE-120215-160]
7. avpr2aa ENSDARG00000007436 43 1.728 0.819 - - - - - 0.909 - - arginine vasopressin receptor 2a, duplicate a [Source:ZFIN;Acc:ZDB-GENE-090313-344]
8. ebpl ENSDARG00000036636 79 1.727 - - - - - 0.855 0.872 - - EBP like [Source:ZFIN;Acc:ZDB-GENE-030616-542]
9. gabpb2b ENSDARG00000054344, ENSDARG00000109958 238 1.721 - 0.831 - - - 0.890 - - - GA binding protein transcription factor subunit beta 2b [Source:ZFIN;Acc:ZDB-GENE-050208-136]
10. FAM26E FAM26E 79 1.707 0.784 - - - - - 0.923 - -
11. CR848728.2 CR848728.2 99 1.702 0.881 - - - - 0.821 - - -
12. IYD IYD 8 1.702 - - - - - 0.793 0.909 - -
13. si:dkeyp-72e1.6 ENSDARG00000099877 126 1.672 0.810 - - - - 0.862 - - - si:dkeyp-72e1.6 [Source:ZFIN;Acc:ZDB-GENE-120215-228]
14. dbpa ENSDARG00000063014 107 1.659 0.750 - - - - - 0.909 - - D site albumin promoter binding protein a [Source:ZFIN;Acc:ZDB-GENE-060503-802]
15. vasa vasa 64 1.649 - - - - - 0.801 0.848 - -
16. cabp2b ENSDARG00000052277 119 1.648 0.786 - - - - - 0.862 - - calcium binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-081028-55]
17. ska3 ENSDARG00000069917, ENSDARG00000114978 497 1.645 0.811 - - - - - 0.834 - - spindle and kinetochore associated complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-030131-2997]
18. pxn pxn 10 1.64 - - - - 0.731 - 0.909 - -
19. DPEP3 DPEP3 53 1.634 0.799 - - - - - 0.835 - -
20. alg2 ENSDARG00000070399 772 1.627 0.844 - - 0.783 - - - - - asparagine-linked glycosylation 2 (alpha-1,3-mannosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-060502-2]
21. slc12a10.3 ENSDARG00000055253 127 1.621 - - - - - 0.746 0.875 - - slc12a10.3 solute carrier family 12 (sodium/potassium/chloride transporters), member 10, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-060503-518]
22. slc9a3.1 ENSDARG00000058498 46 1.616 0.795 - - - - 0.821 - - - solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-060503-545]
23. si:dkey-6n3.3 si:dkey-6n3.3 9 1.614 - - - - - 0.821 0.793 - -
24. adora2aa ENSDARG00000033706, ENSDARG00000114856 144 1.607 0.862 - - 0.745 - - - - - adenosine A2a receptor a [Source:ZFIN;Acc:ZDB-GENE-080723-28]
25. wdr17 ENSDARG00000075098 83 1.602 - - - - - 0.766 0.836 - - WD repeat domain 17 [Source:ZFIN;Acc:ZDB-GENE-090313-131]
26. SLC5A8 ENSDARG00000087120 60 1.594 - - - - - 0.821 0.773 - - solute carrier family 5 (sodium/monocarboxylate cotransporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-141211-63]
27. zgc:112285 ENSDARG00000053323 17 1.587 - 0.763 - - - 0.824 - - - zgc:112285 [Source:ZFIN;Acc:ZDB-GENE-050913-132]
28. ubxn10 ENSDARG00000052535 24 1.582 - - - - - 0.821 0.761 - - UBX domain protein 10 [Source:ZFIN;Acc:ZDB-GENE-060825-319]
29. PEG3_3 PEG3_3 165 1.56 0.839 0.721 - - - - - - -
30. six1a ENSDARG00000039304 1183 1.559 - 0.772 - 0.787 - - - - - SIX homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-040718-155]
31. si:ch211-120g10.1 ENSDARG00000090930 275 1.553 - - - - - 0.812 0.741 - - si:ch211-120g10.1 [Source:ZFIN;Acc:ZDB-GENE-130531-56]
32. SORT1 SORT1 33 1.545 0.834 - 0.711 - - - - - -
33. SNX20 ENSDARG00000045554 77 1.536 0.760 - - - - - 0.776 - - sorting nexin 20 [Source:ZFIN;Acc:ZDB-GENE-100806-1]
34. hnrnpc ENSDARG00000053810, ENSDARG00000113662 66 1.536 0.772 - - - - - 0.764 - - heterogeneous nuclear ribonucleoprotein C [Source:ZFIN;Acc:ZDB-GENE-040426-2043]
35. si:ch211-113a14.29 48 1.534 0.807 - 0.727 - - - - - - si:ch211-113a14.29
36. si:ch211-113e8.10 ENSDARG00000079631 498 1.534 0.832 - - 0.702 - - - - - si:ch211-113e8.10 [Source:ZFIN;Acc:ZDB-GENE-090313-11]
37. wu:fc75a09 ENSDARG00000111625 289 1.533 - 0.704 - - - - 0.829 - - wu:fc75a09 [Source:ZFIN;Acc:ZDB-GENE-030131-4139]
38. si:dkeyp-69b9.3 ENSDARG00000088881 109 1.532 0.827 - - - - - 0.705 - - si:dkeyp-69b9.3 [Source:ZFIN;Acc:ZDB-GENE-100922-275]
39. FBXO40 FBXO40 194 1.531 0.778 0.753 - - - - - - -
40. uncx4.1 ENSDARG00000037760 472 1.524 - 0.782 - 0.742 - - - - - Unc4.1 homeobox (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-050714-1]
41. galm ENSDARG00000057630, ENSDARG00000111113, ENSDARG00000115399 109 1.52 0.817 - - - - 0.703 - - - galactose mutarotase [Source:ZFIN;Acc:ZDB-GENE-040718-66]
42. C8H9orf116 C8H9orf116 379 1.514 0.788 - - 0.726 - - - - -
43. WDR70 ENSDARG00000109022 265 1.513 - 0.747 - - - - 0.766 - - WD repeat domain 70 [Source:HGNC Symbol;Acc:HGNC:25495]
44. klhl23 ENSDARG00000078475 92 1.51 - - - 0.752 - 0.758 - - - kelch-like family member 23 [Source:ZFIN;Acc:ZDB-GENE-081104-458]
45. C9H3orf38 C9H3orf38 83 1.508 0.786 - - - - 0.722 - - -
46. dnah12 ENSDARG00000059987 110 1.502 0.771 - - 0.731 - - - - - dynein, axonemal, heavy chain 12 [Source:ZFIN;Acc:ZDB-GENE-090311-9]
47. pld3 ENSDARG00000068199 205 1.495 - - 0.701 - - - 0.794 - - phospholipase D family, member 3 [Source:ZFIN;Acc:ZDB-GENE-050419-212]
48. ENSDARG00000074422 ENSDARG00000074422 61 1.491 - - - 0.745 - 0.746 - - -
49. BX323854.3 BX323854.3 62 1.482 - - 0.704 - - 0.778 - - -
50. slc17a9b ENSDARG00000011049 231 1.48 0.759 - - - 0.721 - - - - solute carrier family 17 (vesicular nucleotide transporter), member 9b [Source:ZFIN;Acc:ZDB-GENE-040718-380]
51. gltpd1 gltpd1 377 1.478 0.773 - - 0.705 - - - - -
52. kctd16b ENSDARG00000020102 83 1.477 - 0.706 - - - - 0.771 - - potassium channel tetramerization domain containing 16b [Source:ZFIN;Acc:ZDB-GENE-060117-2]
53. ugt5c3 ENSDARG00000061439 142 1.474 - - - 0.728 - 0.746 - - - UDP glucuronosyltransferase 5 family, polypeptide C3 [Source:ZFIN;Acc:ZDB-GENE-050419-23]
54. morn2 ENSDARG00000071360 44 1.471 - - - - - 0.763 - - 0.708 MORN repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-060825-230]
55. hhipl1 ENSDARG00000062501 210 1.453 - - - 0.730 - - 0.723 - - HHIP-like 1 [Source:ZFIN;Acc:ZDB-GENE-090306-3]
56. rbm48 ENSDARG00000033754 193 1.436 - 0.705 - - - - 0.731 - - RNA binding motif protein 48 [Source:ZFIN;Acc:ZDB-GENE-060328-1]
57. C16H1orf43 C16H1orf43 380 1.43 0.706 - - - - - 0.724 - -
58. samd1b ENSDARG00000079062 280 1.423 0.717 - 0.706 - - - - - - sterile alpha motif domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-090313-2]
59. C2H5orf22 C2H5orf22 196 1.418 - - - 0.711 - - 0.707 - -
60. vil1 ENSDARG00000040466 81 0.985 - - - - - 0.985 - - - villin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-799]
61. gcgrb ENSDARG00000036272 54 0.976 - - - - - - 0.976 - - glucagon receptor b [Source:ZFIN;Acc:ZDB-GENE-050516-2]
62. ccl-c5a ccl-c5a 217 0.966 - - - - - 0.966 - - -
63. CR677591.1 CR677591.1 19 0.964 - - - - - - 0.964 - -
64. U2 U2 52 0.964 - - - - - - 0.964 - -
65. HEATR5B ENSDARG00000059116 3 0.964 - - - - - - 0.964 - - HEAT repeat containing 5B [Source:ZFIN;Acc:ZDB-GENE-130530-676]
66. CR391977.3 CR391977.3 76 0.964 - - - - - - 0.964 - -
67. trpa1a ENSDARG00000016699 43 0.964 - - - - - - 0.964 - - transient receptor potential cation channel, subfamily A, member 1a [Source:ZFIN;Acc:ZDB-GENE-050105-6]
68. ism2 ism2 153 0.963 - - - - - - 0.963 - -
69. cldn15a ENSDARG00000112049 264 0.962 - - - - - - 0.962 - - claudin 15a [Source:ZFIN;Acc:ZDB-GENE-040426-1305]
70. CABZ01081747.2 CABZ01081747.2 9 0.962 - - - - - - 0.962 - -
71. INHBE INHBE 95 0.958 - - - - - - 0.958 - -
72. chd 56 0.955 - - - - - 0.955 - - - chordin
73. AP1S3 AP1S3 8 0.95 - - - - - 0.950 - - -
74. si:ch211-69i14.10 si:ch211-69i14.10 1939 0.949 - - - - - 0.949 - - -
75. gchfr ENSDARG00000098588 169 0.949 - - - - - - 0.949 - - GTP cyclohydrolase I feedback regulator [Source:ZFIN;Acc:ZDB-GENE-040426-1731]
76. crb2b ENSDARG00000060081 144 0.943 - - - - - - 0.943 - - crumbs family member 2b [Source:ZFIN;Acc:ZDB-GENE-060610-1]
77. tmem63a ENSDARG00000031956 112 0.942 - - - - - - 0.942 - - transmembrane protein 63A [Source:ZFIN;Acc:ZDB-GENE-041210-107]
78. clcnk ENSDARG00000022560 355 0.941 - - - - - 0.941 - - - chloride channel K [Source:ZFIN;Acc:ZDB-GENE-040426-1379]
79. dusp12 ENSDARG00000076330 173 0.941 - - - - - - 0.941 - - dual specificity phosphatase 12 [Source:ZFIN;Acc:ZDB-GENE-050626-91]
80. mycbpap ENSDARG00000069194 32 0.936 - - - - - 0.936 - - - mycbp associated protein [Source:ZFIN;Acc:ZDB-GENE-080923-1]
81. FANCA ENSDARG00000098241 39 0.933 - - - - - - 0.933 - - FA complementation group A [Source:ZFIN;Acc:ZDB-GENE-060508-1]
82. CU469544.1 CU469544.1 219 0.933 - - - - - - 0.933 - -
83. stx3a ENSDARG00000001880 69 0.933 - - - - - - 0.933 - - syntaxin 3A [Source:ZFIN;Acc:ZDB-GENE-040426-1489]
84. gsto1 ENSDARG00000022183 13 0.933 - - - - - - 0.933 - - glutathione S-transferase omega 1 [Source:ZFIN;Acc:ZDB-GENE-040718-365]
85. BX571714.1 ENSDARG00000114727 243 0.929 - - - - - 0.929 - - - SET domain containing 1A [Source:NCBI gene;Acc:556535]
86. ABHD12B_1 ABHD12B_1 57 0.926 - - - - - - 0.926 - -
87. zgc:113220 ENSDARG00000014775 235 0.926 - - - - - - 0.926 - - zgc:113220 [Source:ZFIN;Acc:ZDB-GENE-050320-64]
88. rdh14a ENSDARG00000039299 79 0.926 - - - - - - 0.926 - - retinol dehydrogenase 14a [Source:ZFIN;Acc:ZDB-GENE-041010-124]
89. fgf10b ENSDARG00000100475 17 0.926 - - - - - - 0.926 - - fibroblast growth factor 10b [Source:ZFIN;Acc:ZDB-GENE-060828-1]
90. oprk1 ENSDARG00000006894 43 0.926 - - - - - - 0.926 - - opioid receptor, kappa 1 [Source:ZFIN;Acc:ZDB-GENE-030729-1]
91. si:ch211-14a11.5 199 0.925 - - - - - 0.925 - - - si:ch211-14a11.5
92. NUFIP1 ENSDARG00000101024 229 0.924 - - - - - - 0.924 - - nuclear fragile X mental retardation protein interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6203]
93. si:dkey-239i20.2 ENSDARG00000043518, ENSDARG00000111965 23 0.923 - - - - - - 0.923 - - si:dkey-239i20.2 [Source:ZFIN;Acc:ZDB-GENE-041001-98]
94. si:ch211-92l17.1 ENSDARG00000094584 18 0.923 - - - - - - 0.923 - - si:ch211-92l17.1 [Source:ZFIN;Acc:ZDB-GENE-041210-113]
95. cep128 ENSDARG00000103771 75 0.923 - - - - - - 0.923 - - centrosomal protein 128 [Source:ZFIN;Acc:ZDB-GENE-070410-34]
96. btr18 ENSDARG00000103618 39 0.923 - - - - - - 0.923 - - bloodthirsty-related gene family, member 18 [Source:ZFIN;Acc:ZDB-GENE-080213-2]
97. piwil2 ENSDARG00000062601 14 0.923 - - - - - - 0.923 - - piwi-like RNA-mediated gene silencing 2 [Source:ZFIN;Acc:ZDB-GENE-060526-345]
98. CABZ01111953.1 ENSDARG00000099747 38 0.923 - - - - - - 0.923 - - oxysterol-binding protein-related protein 10-like [Source:NCBI gene;Acc:100334085]
99. zgc:173837 ENSDARG00000076949 24 0.923 - - - - - - 0.923 - - zgc:173837 [Source:ZFIN;Acc:ZDB-GENE-080213-12]
100. ugt2b3 46 0.923 - - - - - - 0.923 - - UDP glucuronosyltransferase 2 family, polypeptide B3

There are 1298 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA