Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for pole3

Gene Name Gene ID Reads Annotation
pole3 ENSDARG00000008551, ENSDARG00000111677, ENSDARG00000114995 485 polymerase (DNA directed), epsilon 3 (p17 subunit) [Source:ZFIN;Acc:ZDB-GENE-040426-1773]










Genes with expression patterns similar to pole3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pole3 ENSDARG00000008551, ENSDARG00000111677, ENSDARG00000114995 485 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 polymerase (DNA directed), epsilon 3 (p17 subunit) [Source:ZFIN;Acc:ZDB-GENE-040426-1773]
2. si:ch211-282k23.2 ENSDARG00000093591 447 1.845 - - - - 0.996 0.849 - - - si:ch211-282k23.2 [Source:ZFIN;Acc:ZDB-GENE-050420-314]
3. tmem135 ENSDARG00000069157 918 1.789 - - - - 0.997 0.792 - - - transmembrane protein 135 [Source:ZFIN;Acc:ZDB-GENE-070424-70]
4. C8H1orf174 C8H1orf174 372 1.749 - - - - 0.996 - 0.753 - -
5. rtfdc1 1792 1.736 - - - - 0.977 0.759 - - - replication termination factor 2 domain containing 1, transcript variant X2
6. pdcd2l ENSDARG00000002754 417 1.735 - - - - 0.992 0.743 - - - programmed cell death 2-like [Source:ZFIN;Acc:ZDB-GENE-040426-967]
7. kdm5ba ENSDARG00000057093, ENSDARG00000111539 3302 1.681 - - - - 0.929 0.752 - - - lysine (K)-specific demethylase 5Ba [Source:ZFIN;Acc:ZDB-GENE-030131-5379]
8. ehd3 ENSDARG00000007869 3238 1.679 - - - - 0.944 - 0.735 - - EH-domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-041014-352]
9. ptpro ENSDARG00000100422, ENSDARG00000110470 1850 1.616 - - - - 0.893 0.723 - - - protein tyrosine phosphatase, receptor type, O [Source:ZFIN;Acc:ZDB-GENE-070424-54]
10. flrt3 ENSDARG00000076895 3516 1.61 - - - - 0.806 0.804 - - - fibronectin leucine rich transmembrane 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1988]
11. dpf2l ENSDARG00000037291, ENSDARG00000112198 2353 1.605 - - - 0.863 - 0.742 - - - D4, zinc and double PHD fingers family 2, like [Source:ZFIN;Acc:ZDB-GENE-030131-5132]
12. ube2d2l ENSDARG00000099749 1462 1.556 - - - - - 0.851 0.705 - - ubiquitin-conjugating enzyme E2D 2 (UBC4/5 homolog, yeast), like [Source:ZFIN;Acc:ZDB-GENE-030131-7384]
13. PPFIA3 ENSDARG00000077053 310 1.549 0.760 - - - - 0.789 - - - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3 [Source:ZFIN;Acc:ZDB-GENE-100311-3]
14. si:ch211-240g9.1 36 1.548 0.754 - - - - 0.794 - - - si:ch211-240g9.1
15. slc7a6os ENSDARG00000010596 1599 1.547 - - - - - 0.782 0.765 - - solute carrier family 7, member 6 opposite strand [Source:ZFIN;Acc:ZDB-GENE-041114-32]
16. CR762436.4 CR762436.4 267 1.532 - - - - - 0.779 - - 0.753
17. sp1 ENSDARG00000088347 1697 1.53 - - 0.733 - - 0.797 - - - sp1 transcription factor [Source:ZFIN;Acc:ZDB-GENE-030131-2829]
18. ifi35 ENSDARG00000075643 62 1.525 - - - - - - 0.783 - 0.742 interferon-induced protein 35 [Source:ZFIN;Acc:ZDB-GENE-100311-2]
19. alkbh5 ENSDARG00000063003 185 1.515 - - - - - - 0.721 - 0.794 alkB homolog 5, RNA demethylase [Source:ZFIN;Acc:ZDB-GENE-061013-602]
20. CDC42BPA CDC42BPA 295 1.504 - - - - - 0.787 0.717 - -
21. chst10 ENSDARG00000031632 461 1.504 - - - - - 0.800 0.704 - - carbohydrate sulfotransferase 10 [Source:ZFIN;Acc:ZDB-GENE-040808-40]
22. nitr3c ENSDARG00000057620, ENSDARG00000077998, ENSDARG00000111724 96 1.499 - - - - - 0.751 - - 0.748 novel immune-type receptor 3c [Source:ZFIN;Acc:ZDB-GENE-041001-13]
23. EXO5 ENSDARG00000042727, ENSDARG00000111772 282 1.49 0.771 - - - - 0.719 - - - exonuclease 5 [Source:ZFIN;Acc:ZDB-GENE-051113-108]
24. si:dkey-32e6.6 ENSDARG00000070857 79 1.471 0.769 - - - - 0.702 - - - si:dkey-32e6.6 [Source:ZFIN;Acc:ZDB-GENE-081031-90]
25. psmd11a ENSDARG00000060150 4529 1.469 - - - 0.743 - - - 0.726 - proteasome 26S subunit, non-ATPase 11a [Source:ZFIN;Acc:ZDB-GENE-030131-2711]
26. PKD1 PKD1 260 1.459 - - - - - 0.756 - - 0.703
27. glipr2l ENSDARG00000016837 440 1.44 - - - - - 0.710 - - 0.730 GLI pathogenesis-related 2, like [Source:ZFIN;Acc:ZDB-GENE-041010-53]
28. pole ENSDARG00000058533, ENSDARG00000115430 381 1.434 - - - - - 0.728 - - 0.706 polymerase (DNA directed), epsilon [Source:ZFIN;Acc:ZDB-GENE-070705-557]
29. appb ENSDARG00000055543, ENSDARG00000109552 4461 1.422 - 0.710 - - - 0.712 - - - amyloid beta (A4) precursor protein b [Source:ZFIN;Acc:ZDB-GENE-020220-1]
30. BX548000.3 BX548000.3 241 0.998 - - - - 0.998 - - - -
31. Mar-01 Mar-01 176 0.997 - - - - 0.997 - - - -
32. tpcn1 ENSDARG00000062362 563 0.997 - - - - 0.997 - - - - two pore segment channel 1 [Source:ZFIN;Acc:ZDB-GENE-060526-199]
33. esrrb ENSDARG00000100847 636 0.997 - - - - 0.997 - - - - estrogen-related receptor beta [Source:ZFIN;Acc:ZDB-GENE-040616-2]
34. pcdh18a ENSDARG00000089805 1096 0.997 - - - - 0.997 - - - - protocadherin 18a [Source:ZFIN;Acc:ZDB-GENE-000607-1]
35. aatkb ENSDARG00000104442 392 0.997 - - - - 0.997 - - - - apoptosis-associated tyrosine kinase b [Source:ZFIN;Acc:ZDB-GENE-100812-6]
36. tbx19 ENSDARG00000079187 133 0.997 - - - - 0.997 - - - - T-box 19 [Source:ZFIN;Acc:ZDB-GENE-110411-5]
37. gsto2 ENSDARG00000033285 583 0.997 - - - - 0.997 - - - - glutathione S-transferase omega 2 [Source:ZFIN;Acc:ZDB-GENE-041114-67]
38. zgc:171759_5 ENSDARG00000100259, ENSDARG00000109737, ENSDARG00000111964, ENSDARG00000114195, ENSDARG00000115938 274 0.997 - - - - 0.997 - - - - zgc:171759 [Source:ZFIN;Acc:ZDB-GENE-071004-32]
39. rassf10a 417 0.997 - - - - 0.997 - - - - Ras association (RalGDS/AF-6) domain family (N-terminal) member 10a
40. CR933820.2 CR933820.2 152 0.997 - - - - 0.997 - - - -
41. her4.3 ENSDARG00000070770 613 0.996 - - - - 0.996 - - - - hairy-related 4, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-081030-7]
42. wfikkn2a ENSDARG00000013460 859 0.996 - - - - 0.996 - - - - info WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-120914-1]
43. lrrfip2 ENSDARG00000010400 2633 0.996 - - - - 0.996 - - - - leucine rich repeat (in FLII) interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7781]
44. CHD6 ENSDARG00000017244 219 0.996 - - - - 0.996 - - - - chromodomain helicase DNA binding protein 6 [Source:ZFIN;Acc:ZDB-GENE-130530-559]
45. paqr3b ENSDARG00000044253, ENSDARG00000110049 381 0.996 - - - - 0.996 - - - - progestin and adipoQ receptor family member IIIb [Source:ZFIN;Acc:ZDB-GENE-050913-128]
46. farp1 ENSDARG00000074381 406 0.996 - - - - 0.996 - - - - FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived) [Source:ZFIN;Acc:ZDB-GENE-070424-163]
47. nol8 ENSDARG00000044143 425 0.996 - - - - 0.996 - - - - nucleolar protein 8 [Source:ZFIN;Acc:ZDB-GENE-050208-491]
48. sepsecs ENSDARG00000033861 478 0.995 - - - - 0.995 - - - - Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase [Source:ZFIN;Acc:ZDB-GENE-040426-859]
49. alpl ENSDARG00000015546 334 0.995 - - - - 0.995 - - - - alkaline phosphatase, liver/bone/kidney [Source:ZFIN;Acc:ZDB-GENE-040420-1]
50. anapc1 ENSDARG00000075687 488 0.995 - - - - 0.995 - - - - anaphase promoting complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-081107-12]
51. minpp1a ENSDARG00000057058, ENSDARG00000110567, ENSDARG00000116432 496 0.995 - - - - 0.995 - - - - multiple inositol-polyphosphate phosphatase 1a [Source:ZFIN;Acc:ZDB-GENE-060929-1194]
52. slc38a4 ENSDARG00000018149 2344 0.995 - - - - 0.995 - - - - solute carrier family 38, member 4 [Source:ZFIN;Acc:ZDB-GENE-041010-14]
53. invs ENSDARG00000002213 261 0.995 - - - - 0.995 - - - - inversin [Source:ZFIN;Acc:ZDB-GENE-020507-2]
54. ikbkb ENSDARG00000079123 498 0.994 - - - - 0.994 - - - - inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta [Source:ZFIN;Acc:ZDB-GENE-071115-2]
55. frem1b ENSDARG00000062402 750 0.994 - - - - 0.994 - - - - Fras1 related extracellular matrix 1b [Source:ZFIN;Acc:ZDB-GENE-050208-783]
56. gon4l ENSDARG00000005867 982 0.994 - - - - 0.994 - - - - gon-4-like (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-070117-2447]
57. ccnb1 ENSDARG00000051923 3226 0.994 - - - - 0.994 - - - - cyclin B1 [Source:ZFIN;Acc:ZDB-GENE-000406-10]
58. espn ENSDARG00000076414 343 0.994 - - - - 0.994 - - - - espin [Source:ZFIN;Acc:ZDB-GENE-081105-173]
59. cdan1 ENSDARG00000042261 658 0.994 - - - - 0.994 - - - - codanin 1 [Source:ZFIN;Acc:ZDB-GENE-110411-280]
60. C1H3orf70 C1H3orf70 634 0.994 - - - - 0.994 - - - -
61. gpr161 ENSDARG00000055659 454 0.994 - - - - 0.994 - - - - G protein-coupled receptor 161 [Source:ZFIN;Acc:ZDB-GENE-030616-58]
62. myo9al1 myo9al1 1194 0.994 - - - - 0.994 - - - -
63. sh3bp5lb 1090 0.994 - - - - 0.994 - - - - SH3-binding domain protein 5-like, b
64. usf2 ENSDARG00000020228 2667 0.993 - - - - 0.993 - - - - upstream transcription factor 2, c-fos interacting [Source:ZFIN;Acc:ZDB-GENE-030131-8475]
65. slc39a13 ENSDARG00000000442 1367 0.993 - - - - 0.993 - - - - solute carrier family 39 (zinc transporter), member 13 [Source:ZFIN;Acc:ZDB-GENE-030616-17]
66. mettl16 ENSDARG00000055838 818 0.993 - - - - 0.993 - - - - methyltransferase like 16 [Source:ZFIN;Acc:ZDB-GENE-040801-130]
67. kat2a ENSDARG00000104734 802 0.993 - - - - 0.993 - - - - K(lysine) acetyltransferase 2A [Source:ZFIN;Acc:ZDB-GENE-080403-11]
68. gas5 279 0.992 - - - - 0.992 - - - - growth arrest-specific 5, transcript variant X4
69. rybpa ENSDARG00000037773 904 0.992 - - - - 0.992 - - - - RING1 and YY1 binding protein a [Source:ZFIN;Acc:ZDB-GENE-030424-3]
70. setd8a 2549 0.992 - - - - 0.992 - - - - SET domain containing (lysine methyltransferase) 8a
71. il1rapl1a ENSDARG00000062045, ENSDARG00000115285 1200 0.992 - - - - 0.992 - - - - interleukin 1 receptor accessory protein-like 1a [Source:ZFIN;Acc:ZDB-GENE-061013-249]
72. bnc2 ENSDARG00000069989 757 0.991 - - - - 0.991 - - - - basonuclin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5784]
73. MTA1 ENSDARG00000007198 731 0.991 - - - - 0.991 - - - - metastasis associated 1 [Source:ZFIN;Acc:ZDB-GENE-131121-353]
74. utp3 ENSDARG00000056720 922 0.991 - - - - 0.991 - - - - UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040912-163]
75. gcfc2 ENSDARG00000079020 479 0.991 - - - - 0.991 - - - - GC-rich sequence DNA-binding factor 2 [Source:ZFIN;Acc:ZDB-GENE-080204-19]
76. rnft1 ENSDARG00000015917, ENSDARG00000116783 1197 0.99 - - - - 0.990 - - - - ring finger protein, transmembrane 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2324]
77. cnpy1 ENSDARG00000003757 1132 0.99 - - - - 0.990 - - - - canopy FGF signaling regulator 1 [Source:ZFIN;Acc:ZDB-GENE-060315-3]
78. alx4a ENSDARG00000088332 895 0.99 - - - - 0.990 - - - - ALX homeobox 4a [Source:ZFIN;Acc:ZDB-GENE-070712-3]
79. znf362 znf362 869 0.99 - - - - 0.990 - - - -
80. ncaph2 ENSDARG00000033757 1042 0.99 - - - - 0.990 - - - - non-SMC condensin II complex, subunit H2 [Source:ZFIN;Acc:ZDB-GENE-041210-172]
81. tmem62 ENSDARG00000053890 1233 0.99 - - - - 0.990 - - - - transmembrane protein 62 [Source:ZFIN;Acc:ZDB-GENE-040426-1837]
82. CASKIN2_1 CASKIN2_1 2299 0.989 - - - - 0.989 - - - -
83. si:dkey-19e4.5 ENSDARG00000089886 2562 0.989 - - - - 0.989 - - - - si:dkey-19e4.5 [Source:ZFIN;Acc:ZDB-GENE-030131-1852]
84. smurf2 ENSDARG00000038067 2057 0.989 - - - - 0.989 - - - - SMAD specific E3 ubiquitin protein ligase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1830]
85. tuft1b ENSDARG00000071010 909 0.988 - - - - 0.988 - - - - tuftelin 1b [Source:ZFIN;Acc:ZDB-GENE-060503-150]
86. fzd8a ENSDARG00000045444 802 0.988 - - - - 0.988 - - - - frizzled class receptor 8a [Source:ZFIN;Acc:ZDB-GENE-000328-3]
87. gnao1a ENSDARG00000016676 8184 0.988 - - - - 0.988 - - - - guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O, a [Source:ZFIN;Acc:ZDB-GENE-040426-1757]
88. azi1 azi1 507 0.988 - - - - 0.988 - - - -
89. mbd1 mbd1 1309 0.988 - - - - 0.988 - - - -
90. cdc14ab ENSDARG00000057016 1016 0.988 - - - - 0.988 - - - - cell division cycle 14Ab [Source:ZFIN;Acc:ZDB-GENE-070705-309]
91. ctnnd2b ENSDARG00000003779 964 0.987 - - - - 0.987 - - - - catenin (cadherin-associated protein), delta 2b [Source:ZFIN;Acc:ZDB-GENE-070912-532]
92. gpr98 gpr98 717 0.987 - - - - 0.987 - - - -
93. tmem176l.1 ENSDARG00000099491 860 0.987 - - - - 0.987 - - - - transmembrane protein 176l.1 [Source:ZFIN;Acc:ZDB-GENE-080829-11]
94. adi1 ENSDARG00000020448 1402 0.987 - - - - 0.987 - - - - acireductone dioxygenase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2799]
95. fam129ba ENSDARG00000062970 1578 0.986 - - - - 0.986 - - - - family with sequence similarity 129, member Ba [Source:ZFIN;Acc:ZDB-GENE-070112-1222]
96. brd7 ENSDARG00000008380 3654 0.986 - - - - 0.986 - - - - bromodomain containing 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2687]
97. arhgap29b ENSDARG00000017748 812 0.986 - - - - 0.986 - - - - Rho GTPase activating protein 29b [Source:ZFIN;Acc:ZDB-GENE-031010-44]
98. zgc:111974 zgc:111974 1386 0.986 - - - - 0.986 - - - -
99. hpca ENSDARG00000018397, ENSDARG00000110115 3866 0.985 - - - - 0.985 - - - - hippocalcin [Source:ZFIN;Acc:ZDB-GENE-040426-1683]
100. lysmd2 ENSDARG00000091771, ENSDARG00000112692 1102 0.985 - - - - 0.985 - - - - LysM, putative peptidoglycan-binding, domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040801-250]

There are 1118 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA