Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for polb

Gene Name Gene ID Reads Annotation
polb ENSDARG00000003749 2049 polymerase (DNA directed), beta [Source:ZFIN;Acc:ZDB-GENE-040830-1]










Genes with expression patterns similar to polb

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. polb ENSDARG00000003749 2049 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 polymerase (DNA directed), beta [Source:ZFIN;Acc:ZDB-GENE-040830-1]
2. nova2 ENSDARG00000017673 7685 3.252 - - 0.787 - 0.793 - 0.799 0.873 - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
3. tuba1c ENSDARG00000055216 8384 3.133 - - 0.921 - - 0.754 0.755 - 0.703 tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
4. metrn ENSDARG00000030367, ENSDARG00000112407, ENSDARG00000115842 7032 3.119 - - 0.880 - - 0.771 0.765 0.703 - meteorin, glial cell differentiation regulator [Source:ZFIN;Acc:ZDB-GENE-050102-1]
5. ptbp2b ENSDARG00000015901 2458 3.04 - 0.743 - - - 0.818 0.778 - 0.701 polypyrimidine tract binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-060810-49]
6. nop10 ENSDARG00000104227 2463 2.839 - - 0.906 - 0.969 - - 0.964 - NOP10 ribonucleoprotein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-041007-4]
7. tdg tdg 3269 2.639 - - 0.949 - 0.955 0.735 - - -
8. dpysl3 ENSDARG00000002587 4381 2.618 - - - - 0.927 - 0.798 0.893 - dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
9. pkib ENSDARG00000053110 527 2.603 - - 0.976 - - 0.877 0.750 - - protein kinase (cAMP-dependent, catalytic) inhibitor beta [Source:ZFIN;Acc:ZDB-GENE-041014-312]
10. eno2 ENSDARG00000014287 2162 2.595 - - - - - 0.874 0.770 0.951 - enolase 2 [Source:ZFIN;Acc:ZDB-GENE-040704-27]
11. hpca ENSDARG00000018397, ENSDARG00000110115 3866 2.547 - - - - 0.962 0.834 0.751 - - hippocalcin [Source:ZFIN;Acc:ZDB-GENE-040426-1683]
12. plp1a ENSDARG00000103732 3544 2.546 - - 0.927 - - 0.861 0.758 - - proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
13. npm1b ENSDARG00000037675 5448 2.53 - - 0.873 - 0.822 0.835 - - - nucleophosmin 1b [Source:ZFIN;Acc:ZDB-GENE-080723-7]
14. fkbp7 ENSDARG00000010962 2986 2.522 - 0.752 - - 0.898 - - 0.872 - FK506 binding protein 7 [Source:ZFIN;Acc:ZDB-GENE-030616-182]
15. onecutl ENSDARG00000040253 2143 2.501 - - 0.962 - - 0.785 0.754 - - one cut domain, family member, like [Source:ZFIN;Acc:ZDB-GENE-020531-1]
16. rtfdc1 1792 2.468 - 0.740 - - 0.950 0.778 - - - replication termination factor 2 domain containing 1, transcript variant X2
17. hoxc4a ENSDARG00000070338 1382 2.466 - - - - 0.968 0.779 0.719 - - homeobox C4a [Source:ZFIN;Acc:ZDB-GENE-990415-112]
18. hoxb8b ENSDARG00000054025, ENSDARG00000111056 2106 2.447 - - - - - 0.846 0.740 0.861 - homeobox B8b [Source:ZFIN;Acc:ZDB-GENE-980526-291]
19. peli1b ENSDARG00000044083, ENSDARG00000112797 3801 2.432 - - - - 0.887 0.767 0.778 - - pellino E3 ubiquitin protein ligase 1b [Source:ZFIN;Acc:ZDB-GENE-061027-372]
20. aatkb ENSDARG00000104442 392 2.424 - - - - 0.970 0.708 0.746 - - apoptosis-associated tyrosine kinase b [Source:ZFIN;Acc:ZDB-GENE-100812-6]
21. si:ch211-282k23.2 ENSDARG00000093591 447 2.388 - - - - 0.977 0.702 0.709 - - si:ch211-282k23.2 [Source:ZFIN;Acc:ZDB-GENE-050420-314]
22. tcea1 ENSDARG00000003531 2912 2.368 - - - 0.750 0.916 0.702 - - - transcription elongation factor A (SII), 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8049]
23. tox ENSDARG00000032317 9126 2.357 - - 0.876 - - - 0.745 - 0.736 thymocyte selection-associated high mobility group box [Source:ZFIN;Acc:ZDB-GENE-070912-181]
24. her4.2_1 ENSDARG00000056729, ENSDARG00000094426 2383 2.355 - - - - - 0.899 0.738 - 0.718 hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
25. dpysl4 ENSDARG00000103490 534 2.327 - - - - - 0.816 0.740 - 0.771 dihydropyrimidinase-like 4 [Source:ZFIN;Acc:ZDB-GENE-050720-3]
26. coil ENSDARG00000040070 863 2.324 - 0.736 - - 0.872 0.716 - - - coilin p80 [Source:ZFIN;Acc:ZDB-GENE-000330-8]
27. ZFHX3 ENSDARG00000103057 7759 2.314 - - - - 0.789 0.760 0.765 - - zinc finger homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7577]
28. rpa3 ENSDARG00000002613 2923 2.313 0.819 0.789 - - - - 0.705 - - replication protein A3 [Source:ZFIN;Acc:ZDB-GENE-040426-977]
29. DTX4 ENSDARG00000076302 2642 2.306 - - 0.712 - - 0.822 0.772 - - deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
30. lfng ENSDARG00000037879 11783 2.304 - - 0.702 - - 0.706 - 0.896 - LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:ZFIN;Acc:ZDB-GENE-980605-16]
31. tshz1 ENSDARG00000005026 1948 2.285 - - 0.710 - - 0.700 0.875 - - teashirt zinc finger homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030820-3]
32. hnrnpub ENSDARG00000004735 16496 2.276 - - - - - 0.750 0.765 - 0.761 heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
33. arl6ip4 ENSDARG00000105036, ENSDARG00000110324, ENSDARG00000116805 1142 2.268 - - - 0.725 - 0.821 - - 0.722 ADP-ribosylation factor-like 6 interacting protein 4 [Source:ZFIN;Acc:ZDB-GENE-050522-405]
34. hoxc8a ENSDARG00000070346 4252 2.251 - - - - - 0.708 0.745 0.798 - homeobox C8a [Source:ZFIN;Acc:ZDB-GENE-990415-114]
35. rap2ip rap2ip 681 2.245 - - - - - 0.762 0.779 - 0.704
36. dpysl5a ENSDARG00000011141 1827 2.242 - - - - - 0.780 0.753 - 0.709 dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
37. AKT3 AKT3 1729 2.224 - - - 0.724 - 0.759 0.741 - -
38. smarce1 ENSDARG00000016871 9628 2.212 - - 0.781 - - 0.711 0.720 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-967]
39. hmgb1b ENSDARG00000030479 10398 2.211 - - - - 0.704 0.742 0.765 - - high mobility group box 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8480]
40. gap43 ENSDARG00000099744 4114 2.203 - - - - - 0.762 0.734 - 0.707 growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
41. inip ENSDARG00000028523 1925 1.964 - - 0.980 - - - - 0.984 - ints3 and nabp interacting protein [Source:ZFIN;Acc:ZDB-GENE-040426-961]
42. fkbp8 ENSDARG00000001734 1709 1.932 - - 0.975 - - - - 0.957 - FK506 binding protein 8 [Source:ZFIN;Acc:ZDB-GENE-040426-1849]
43. ranbp9 ENSDARG00000061048 2687 1.914 - - 0.964 - 0.950 - - - - RAN binding protein 9 [Source:ZFIN;Acc:ZDB-GENE-021030-5]
44. pex5 ENSDARG00000070654, ENSDARG00000116156, ENSDARG00000116397 1427 1.907 - - 0.974 - - - - 0.933 - peroxisomal biogenesis factor 5 [Source:ZFIN;Acc:ZDB-GENE-040426-981]
45. wu:fb17g07 wu:fb17g07 10567 1.892 - - 0.951 - - - - 0.941 -
46. samm50l ENSDARG00000039681 2465 1.886 - - 0.952 - 0.934 - - - - sorting and assembly machinery component 50 homolog, like [Source:ZFIN;Acc:ZDB-GENE-041114-30]
47. flot2a ENSDARG00000004830 5276 1.883 - - 0.969 - 0.914 - - - - flotillin 2a [Source:ZFIN;Acc:ZDB-GENE-020430-3]
48. lbr ENSDARG00000014013 4835 1.881 - - 0.922 - - - - 0.959 - lamin B receptor [Source:ZFIN;Acc:ZDB-GENE-030804-11]
49. ptges3a ENSDARG00000037284, ENSDARG00000113517 3999 1.855 - - 0.912 - - - - 0.943 - prostaglandin E synthase 3a (cytosolic) [Source:ZFIN;Acc:ZDB-GENE-040426-2200]
50. CABZ01072954.1 CABZ01072954.1 2330 1.852 - - 0.969 - - 0.883 - - -
51. btbd10b ENSDARG00000020252 7251 1.85 - - - - 0.944 - - 0.906 - BTB (POZ) domain containing 10b [Source:ZFIN;Acc:ZDB-GENE-080104-5]
52. smg7 ENSDARG00000060767 2759 1.846 - - - - 0.959 - - 0.887 - SMG7 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-030131-9122]
53. E2F3 ENSDARG00000070463 799 1.845 - - - - - 0.881 - 0.964 - E2F transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-070112-882]
54. pik3r3b ENSDARG00000034409, ENSDARG00000113215, ENSDARG00000117028 3213 1.845 - - - - 0.947 - - 0.898 - phosphoinositide-3-kinase, regulatory subunit 3b (gamma) [Source:ZFIN;Acc:ZDB-GENE-040426-743]
55. tmem50a ENSDARG00000015757 3244 1.835 - 0.884 - - - - - 0.951 - transmembrane protein 50A [Source:ZFIN;Acc:ZDB-GENE-040426-2937]
56. rab27a ENSDARG00000103935 1173 1.829 - 0.874 - - - - - 0.955 - RAB27A, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-050913-46]
57. xylt1 ENSDARG00000061248 2357 1.824 - - 0.972 - - 0.852 - - - xylosyltransferase I [Source:ZFIN;Acc:ZDB-GENE-111017-2]
58. ZBTB16 ZBTB16 3385 1.816 - - 0.953 - - - - 0.863 -
59. qki2 ENSDARG00000010018 2230 1.816 - - 0.980 - - 0.836 - - - QKI, KH domain containing, RNA binding 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1462]
60. phc2b_1 ENSDARG00000013224 1316 1.811 - - 0.982 - - 0.829 - - - polyhomeotic homolog 2b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-1113]
61. zgc:91860 ENSDARG00000041599, ENSDARG00000110489 669 1.81 - - 0.971 - - 0.839 - - - zgc:91860 [Source:ZFIN;Acc:ZDB-GENE-040704-34]
62. pycr1 pycr1 1258 1.809 - - 0.975 - - 0.834 - - -
63. edf1 ENSDARG00000009950 10518 1.808 - - - - 0.900 - - 0.908 - endothelial differentiation-related factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1710]
64. setdb1a ENSDARG00000041243 1952 1.808 - - 0.978 - - - - 0.830 - SET domain, bifurcated 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2421]
65. si:ch211-114l13.11 si:ch211-114l13.11 4727 1.801 - - 0.970 - - - - 0.831 -
66. wdfy4 ENSDARG00000077009 802 1.8 - 0.853 - - - - - 0.947 - WDFY family member 4 [Source:ZFIN;Acc:ZDB-GENE-090313-322]
67. appb ENSDARG00000055543, ENSDARG00000109552 4461 1.799 - - 0.929 - - 0.870 - - - amyloid beta (A4) precursor protein b [Source:ZFIN;Acc:ZDB-GENE-020220-1]
68. anapc13 ENSDARG00000078435 996 1.794 - - 0.946 - - 0.848 - - - anaphase promoting complex subunit 13 [Source:ZFIN;Acc:ZDB-GENE-091204-298]
69. pdzrn3b ENSDARG00000073869 1566 1.787 - - 0.974 - - - 0.813 - - PDZ domain containing RING finger 3b [Source:ZFIN;Acc:ZDB-GENE-071022-4]
70. hira ENSDARG00000013434 2204 1.781 - - 0.954 - - - 0.827 - - histone cell cycle regulator a [Source:ZFIN;Acc:ZDB-GENE-030131-6296]
71. rfx4 ENSDARG00000026395, ENSDARG00000116861 2047 1.771 - - - - - 0.815 - 0.956 - regulatory factor X, 4 [Source:ZFIN;Acc:ZDB-GENE-040909-2]
72. ctnnd2b ENSDARG00000003779 964 1.758 - - - - 0.961 - 0.797 - - catenin (cadherin-associated protein), delta 2b [Source:ZFIN;Acc:ZDB-GENE-070912-532]
73. ptpro ENSDARG00000100422, ENSDARG00000110470 1850 1.756 - - - - 0.870 0.886 - - - protein tyrosine phosphatase, receptor type, O [Source:ZFIN;Acc:ZDB-GENE-070424-54]
74. gga3 ENSDARG00000103667 675 1.751 - 0.780 0.971 - - - - - - ggolgi-associated, gamma adaptin ear containing, ARF binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-041111-218]
75. zgc:85777 ENSDARG00000027009, ENSDARG00000112673 1499 1.749 - 0.778 0.971 - - - - - - zgc:85777 [Source:ZFIN;Acc:ZDB-GENE-040426-2210]
76. dnajc1 ENSDARG00000001940 2848 1.748 - 0.801 - - 0.947 - - - - DnaJ (Hsp40) homolog, subfamily C, member 1 [Source:ZFIN;Acc:ZDB-GENE-061103-529]
77. fignl1 ENSDARG00000016427 636 1.746 - - 0.975 - - 0.771 - - - fidgetin-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1862]
78. s1pr1 ENSDARG00000042690, ENSDARG00000113842, ENSDARG00000116038 2510 1.745 - - 0.981 - - - 0.764 - - sphingosine-1-phosphate receptor 1 [Source:ZFIN;Acc:ZDB-GENE-001228-2]
79. kdm5ba ENSDARG00000057093, ENSDARG00000111539 3302 1.743 - - - - 0.912 0.831 - - - lysine (K)-specific demethylase 5Ba [Source:ZFIN;Acc:ZDB-GENE-030131-5379]
80. sh3bp5lb 1090 1.738 - - - - 0.965 0.773 - - - SH3-binding domain protein 5-like, b
81. gnao1a ENSDARG00000016676 8184 1.734 - - - - 0.974 - 0.760 - - guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O, a [Source:ZFIN;Acc:ZDB-GENE-040426-1757]
82. cd99l2 ENSDARG00000056722 5036 1.734 - - 0.871 - - 0.863 - - - CD99 molecule-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1986]
83. actr10 ENSDARG00000038432 1598 1.733 - - 0.972 - - 0.761 - - - ARP10 actin related protein 10 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-768]
84. eva1ba ENSDARG00000102701 1480 1.731 - 0.767 0.964 - - - - - - eva-1 homolog Ba (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-030131-8941]
85. hmgcrb ENSDARG00000105206 2080 1.73 - 0.764 0.966 - - - - - - 3-hydroxy-3-methylglutaryl-CoA reductase b [Source:ZFIN;Acc:ZDB-GENE-051108-1]
86. tm2d3 ENSDARG00000076618 2310 1.727 - 0.763 0.964 - - - - - - TM2 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070620-20]
87. smx5 ENSDARG00000070867, ENSDARG00000111500, ENSDARG00000113078, ENSDARG00000113975 3132 1.724 - 0.772 0.952 - - - - - - smx5 [Source:ZFIN;Acc:ZDB-GENE-000616-10]
88. lgi1a ENSDARG00000020493 1218 1.724 - - 0.980 - - - 0.744 - - leucine-rich, glioma inactivated 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1731]
89. zgc:171566 ENSDARG00000105118 340 1.723 - - - - - 0.769 - 0.954 - zgc:171566 [Source:ZFIN;Acc:ZDB-GENE-050309-193]
90. pou2f2a ENSDARG00000019658, ENSDARG00000036816 2027 1.723 - - 0.979 - - - 0.744 - - POU class 2 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-060310-2]
91. sprb ENSDARG00000058553 1694 1.722 - - 0.966 - - 0.756 - - - sepiapterin reductase b [Source:ZFIN;Acc:ZDB-GENE-070719-1]
92. neo1 neo1 4056 1.721 - - - - - 0.782 - 0.939 -
93. scrt2 ENSDARG00000056175 4331 1.72 - - - - 0.929 0.791 - - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
94. nf2b ENSDARG00000025567 1441 1.72 - - - - - 0.759 - 0.961 - neurofibromin 2b (merlin) [Source:ZFIN;Acc:ZDB-GENE-040622-3]
95. wdr82 ENSDARG00000014083 3159 1.719 - - 0.970 - - 0.749 - - - WD repeat domain 82 [Source:ZFIN;Acc:ZDB-GENE-030131-333]
96. kansl3 ENSDARG00000029556 2487 1.717 - - 0.982 - - 0.735 - - - KAT8 regulatory NSL complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-050809-132]
97. tnks tnks 1695 1.717 - - - - 0.933 0.784 - - -
98. brd7 ENSDARG00000008380 3654 1.717 - - - - 0.963 - 0.754 - - bromodomain containing 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2687]
99. rapgef2 ENSDARG00000005482 2586 1.712 - - - - - - 0.790 0.922 - Rap guanine nucleotide exchange factor (GEF) 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6959]
100. TMEM185A TMEM185A 5505 1.71 - - 0.960 - - 0.750 - - -

There are 2633 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA