Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for pnkp

Gene Name Gene ID Reads Annotation
pnkp ENSDARG00000100455, ENSDARG00000114060 1475 polynucleotide kinase 3'-phosphatase [Source:ZFIN;Acc:ZDB-GENE-061013-433]










Genes with expression patterns similar to pnkp

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pnkp ENSDARG00000100455, ENSDARG00000114060 1475 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 polynucleotide kinase 3'-phosphatase [Source:ZFIN;Acc:ZDB-GENE-061013-433]
2. rhogc ENSDARG00000028401 2671 1.779 - - 0.980 0.799 - - - - - ras homolog gene family, member Gc [Source:ZFIN;Acc:ZDB-GENE-030131-3402]
3. selt1b 1396 1.742 - 0.762 0.980 - - - - - - selenoprotein T, 1b
4. inip ENSDARG00000028523 1925 1.731 - - 0.982 0.749 - - - - - ints3 and nabp interacting protein [Source:ZFIN;Acc:ZDB-GENE-040426-961]
5. tmem33 ENSDARG00000041332 2883 1.697 - - 0.952 0.745 - - - - - transmembrane protein 33 [Source:ZFIN;Acc:ZDB-GENE-030131-5425]
6. gga3 ENSDARG00000103667 675 1.695 - 0.717 0.978 - - - - - - ggolgi-associated, gamma adaptin ear containing, ARF binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-041111-218]
7. tm2d3 ENSDARG00000076618 2310 1.694 - 0.744 0.950 - - - - - - TM2 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070620-20]
8. hmgcrb ENSDARG00000105206 2080 1.69 - - 0.980 - - - 0.710 - - 3-hydroxy-3-methylglutaryl-CoA reductase b [Source:ZFIN;Acc:ZDB-GENE-051108-1]
9. orc1 ENSDARG00000039217, ENSDARG00000115400 795 1.69 - - 0.983 - - 0.707 - - - origin recognition complex, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6960]
10. ZNF618 ENSDARG00000071469 2347 1.687 - - 0.959 0.728 - - - - - zinc finger protein 618 [Source:ZFIN;Acc:ZDB-GENE-030131-2063]
11. wdhd1 ENSDARG00000015998 775 1.681 - - 0.977 0.704 - - - - - WD repeat and HMG-box DNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1665]
12. cdca5 ENSDARG00000044437 2041 1.676 - 0.739 0.937 - - - - - - cell division cycle associated 5 [Source:ZFIN;Acc:ZDB-GENE-030131-235]
13. tdg tdg 3269 1.673 - - 0.943 0.730 - - - - -
14. ubr2 ENSDARG00000070164 3960 1.667 - 0.719 0.948 - - - - - - ubiquitin protein ligase E3 component n-recognin 2 [Source:ZFIN;Acc:ZDB-GENE-081107-29]
15. atp6v1ab ENSDARG00000076318, ENSDARG00000112815 3858 1.659 - - 0.901 - - - 0.758 - - ATPase H+ transporting V1 subunit Ab [Source:ZFIN;Acc:ZDB-GENE-030131-9529]
16. anxa2a ENSDARG00000003216 10684 1.656 - - 0.879 - - - 0.777 - - annexin A2a [Source:ZFIN;Acc:ZDB-GENE-030131-4282]
17. rrbp1b ENSDARG00000041703, ENSDARG00000115474 4598 1.651 - - 0.927 - - - 0.724 - - ribosome binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030429-36]
18. rrbp1a ENSDARG00000013763 4723 1.628 - - 0.879 - - - 0.749 - - ribosome binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9795]
19. nop10 ENSDARG00000104227 2463 1.624 - 0.716 0.908 - - - - - - NOP10 ribonucleoprotein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-041007-4]
20. hmgn3 ENSDARG00000036754, ENSDARG00000116728 11573 1.613 - 0.736 0.877 - - - - - - high mobility group nucleosomal binding domain 3 [Source:ZFIN;Acc:ZDB-GENE-041114-180]
21. CABZ01003826.1_1 CABZ01003826.1_1 1154 1.598 - 0.811 - - - - 0.787 - -
22. clpp ENSDARG00000020679 2125 1.598 - 0.819 - - - - 0.779 - - caseinolytic mitochondrial matrix peptidase proteolytic subunit [Source:ZFIN;Acc:ZDB-GENE-030131-7860]
23. fbxo28 ENSDARG00000027159 9602 1.596 - - 0.894 - - - 0.702 - - F-box protein 28 [Source:ZFIN;Acc:ZDB-GENE-030131-4665]
24. rhoua ENSDARG00000019709 1506 1.533 - 0.766 - - - - 0.767 - - ras homolog family member Ua [Source:ZFIN;Acc:ZDB-GENE-040618-3]
25. hyou1 ENSDARG00000013670 4172 1.53 - - 0.721 - - - 0.809 - - hypoxia up-regulated 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5344]
26. st6gal2 st6gal2 1570 1.525 - - - - - 0.704 0.821 - -
27. usp1 ENSDARG00000056414 1816 1.521 - - 0.710 - - - 0.811 - - ubiquitin specific peptidase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-726]
28. ormdl1 ENSDARG00000014333 1589 1.481 - 0.774 - - - - 0.707 - - ORMDL sphingolipid biosynthesis regulator 1 [Source:ZFIN;Acc:ZDB-GENE-030616-529]
29. MTMR4 1374 1.471 - 0.751 - - - - 0.720 - - myotubularin related protein 4, transcript variant X3
30. AGAP3 ENSDARG00000087822 4128 1.471 - 0.738 - 0.733 - - - - - ArfGAP with GTPase domain, ankyrin repeat and PH domain 3 [Source:ZFIN;Acc:ZDB-GENE-110927-1]
31. arcn1a ENSDARG00000002792 2847 1.463 - - 0.716 - - - 0.747 - - archain 1a [Source:ZFIN;Acc:ZDB-GENE-021031-2]
32. sas sas 1783 1.463 - 0.731 - - - - 0.732 - -
33. pex16 ENSDARG00000058202 486 1.46 - 0.741 - 0.719 - - - - - peroxisomal biogenesis factor 16 [Source:ZFIN;Acc:ZDB-GENE-050626-49]
34. si:ch211-51h9.7 ENSDARG00000074720 227 1.459 - 0.742 - 0.717 - - - - - si:ch211-51h9.7 [Source:ZFIN;Acc:ZDB-GENE-081104-235]
35. RABL6 RABL6 1795 1.455 - - - - - 0.703 0.752 - -
36. si:dkey-240e12.6 ENSDARG00000110137 674 1.451 - 0.705 - - - - 0.746 - - si:dkey-240e12.6 [Source:ZFIN;Acc:ZDB-GENE-050208-367]
37. CABZ01085888.1 CABZ01085888.1 868 1.426 - 0.708 - 0.718 - - - - -
38. tmem209 ENSDARG00000039340 1598 1.419 - - - - - 0.718 0.701 - - transmembrane protein 209 [Source:ZFIN;Acc:ZDB-GENE-030131-2879]
39. kdm5ba ENSDARG00000057093, ENSDARG00000111539 3302 1.418 - 0.718 - - - 0.700 - - - lysine (K)-specific demethylase 5Ba [Source:ZFIN;Acc:ZDB-GENE-030131-5379]
40. NAIF1_1 NAIF1_1 1336 0.987 - - 0.987 - - - - - -
41. PGBD4_3 PGBD4_3 861 0.985 - - 0.985 - - - - - -
42. vipas39 ENSDARG00000103690 280 0.985 - - 0.985 - - - - - - VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog [Source:ZFIN;Acc:ZDB-GENE-040520-1]
43. si:dkeyp-104h9.5 ENSDARG00000073801 722 0.985 - - 0.985 - - - - - - si:dkeyp-104h9.5 [Source:ZFIN;Acc:ZDB-GENE-081104-449]
44. actr10 ENSDARG00000038432 1598 0.984 - - 0.984 - - - - - - ARP10 actin related protein 10 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-768]
45. zgc:85777 ENSDARG00000027009, ENSDARG00000112673 1499 0.983 - - 0.983 - - - - - - zgc:85777 [Source:ZFIN;Acc:ZDB-GENE-040426-2210]
46. zgc:113227 ENSDARG00000058874 266 0.983 - - 0.983 - - - - - - zgc:113227 [Source:ZFIN;Acc:ZDB-GENE-050327-32]
47. smad4 smad4 2519 0.983 - - 0.983 - - - - - -
48. RAB39B RAB39B 482 0.982 - - 0.982 - - - - - -
49. lgi1a ENSDARG00000020493 1218 0.982 - - 0.982 - - - - - - leucine-rich, glioma inactivated 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1731]
50. utp6 ENSDARG00000098433, ENSDARG00000114878, ENSDARG00000116788 1262 0.982 - - 0.982 - - - - - - UTP6, small subunit (SSU) processome component, homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-769]
51. nrg1 ENSDARG00000104314 1081 0.982 - - 0.982 - - - - - - neuregulin 1 [Source:ZFIN;Acc:ZDB-GENE-050302-113]
52. CLIP4 ENSDARG00000096961 363 0.982 - - 0.982 - - - - - - CAP-Gly domain containing linker protein family member 4 [Source:HGNC Symbol;Acc:HGNC:26108]
53. zgc:101559 ENSDARG00000003257, ENSDARG00000112139, ENSDARG00000112819, ENSDARG00000115491 751 0.982 - - 0.982 - - - - - - zgc:101559 [Source:ZFIN;Acc:ZDB-GENE-041114-122]
54. qki2 ENSDARG00000010018 2230 0.981 - - 0.981 - - - - - - QKI, KH domain containing, RNA binding 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1462]
55. si:dkey-176f19.6 si:dkey-176f19.6 373 0.981 - - 0.981 - - - - - -
56. lrp12 ENSDARG00000098845 999 0.981 - - 0.981 - - - - - - low density lipoprotein receptor-related protein 12 [Source:ZFIN;Acc:ZDB-GENE-060503-399]
57. dyrk1ab ENSDARG00000023814 1769 0.981 - - 0.981 - - - - - - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A, b [Source:ZFIN;Acc:ZDB-GENE-030131-5677]
58. gbas gbas 735 0.981 - - 0.981 - - - - - -
59. psmd10 ENSDARG00000015628, ENSDARG00000109675 983 0.981 - - 0.981 - - - - - - proteasome 26S subunit, non-ATPase 10 [Source:ZFIN;Acc:ZDB-GENE-050112-1]
60. CU467832.1 CU467832.1 635 0.981 - - 0.981 - - - - - -
61. pld1b ENSDARG00000057125 325 0.981 - - 0.981 - - - - - - phospholipase D1b [Source:ZFIN;Acc:ZDB-GENE-070510-3]
62. f2rl1.2 ENSDARG00000077540 822 0.981 - - 0.981 - - - - - - coagulation factor II (thrombin) receptor-like 1, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-070615-24]
63. pou2f2a ENSDARG00000019658, ENSDARG00000036816 2027 0.981 - - 0.981 - - - - - - POU class 2 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-060310-2]
64. zgc:171673 ENSDARG00000102473 256 0.981 - - 0.981 - - - - - - zgc:171673 [Source:ZFIN;Acc:ZDB-GENE-071004-20]
65. si:ch211-114l13.11 si:ch211-114l13.11 4727 0.981 - - 0.981 - - - - - -
66. pank1b ENSDARG00000010098 3202 0.981 - - 0.981 - - - - - - pantothenate kinase 1b [Source:ZFIN;Acc:ZDB-GENE-070209-259]
67. mfsd4a mfsd4a 179 0.981 - - 0.981 - - - - - -
68. gata1b ENSDARG00000059130 151 0.981 - - 0.981 - - - - - - GATA binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-081104-43]
69. U1_25 U1_25 283 0.981 - - 0.981 - - - - - -
70. pycr1 pycr1 1258 0.98 - - 0.980 - - - - - -
71. clybl ENSDARG00000029729 690 0.98 - - 0.980 - - - - - - citrate lyase beta like [Source:ZFIN;Acc:ZDB-GENE-030516-6]
72. SNX19 SNX19 350 0.98 - - 0.980 - - - - - -
73. fgd4a ENSDARG00000101471, ENSDARG00000115095 1887 0.98 - - 0.980 - - - - - - FYVE, RhoGEF and PH domain containing 4a [Source:ZFIN;Acc:ZDB-GENE-050420-347]
74. samm50l ENSDARG00000039681 2465 0.98 - - 0.980 - - - - - - sorting and assembly machinery component 50 homolog, like [Source:ZFIN;Acc:ZDB-GENE-041114-30]
75. pou6f1 ENSDARG00000011570 1501 0.98 - - 0.980 - - - - - - POU class 6 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-530]
76. fut8 fut8 652 0.98 - - 0.980 - - - - - -
77. pkib ENSDARG00000053110 527 0.98 - - 0.980 - - - - - - protein kinase (cAMP-dependent, catalytic) inhibitor beta [Source:ZFIN;Acc:ZDB-GENE-041014-312]
78. mrpl22 ENSDARG00000109961 1374 0.98 - - 0.980 - - - - - - mitochondrial ribosomal protein L22 [Source:ZFIN;Acc:ZDB-GENE-080303-28]
79. TMEM261 TMEM261 6529 0.979 - - 0.979 - - - - - -
80. zgc:91860 ENSDARG00000041599, ENSDARG00000110489 669 0.979 - - 0.979 - - - - - - zgc:91860 [Source:ZFIN;Acc:ZDB-GENE-040704-34]
81. DNAJC16 ENSDARG00000059699 507 0.979 - - 0.979 - - - - - - DnaJ (Hsp40) homolog, subfamily C, member 16 [Source:ZFIN;Acc:ZDB-GENE-130530-683]
82. sema3fa ENSDARG00000011163 759 0.979 - - 0.979 - - - - - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fa [Source:ZFIN;Acc:ZDB-GENE-050513-1]
83. PPP1R16B ENSDARG00000079860 390 0.979 - - 0.979 - - - - - - protein phosphatase 1, regulatory subunit 16B [Source:ZFIN;Acc:ZDB-GENE-131127-294]
84. lmbr1 ENSDARG00000024092, ENSDARG00000116241 1418 0.979 - - 0.979 - - - - - - limb development membrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-090128-4]
85. gins4 ENSDARG00000016044 671 0.978 - - 0.978 - - - - - - GINS complex subunit 4 (Sld5 homolog) [Source:ZFIN;Acc:ZDB-GENE-040801-59]
86. tmem248 ENSDARG00000018825 1560 0.978 - - 0.978 - - - - - - transmembrane protein 248 [Source:ZFIN;Acc:ZDB-GENE-050320-103]
87. hemk1 ENSDARG00000078894 397 0.978 - - 0.978 - - - - - - HemK methyltransferase family member 1 [Source:ZFIN;Acc:ZDB-GENE-050208-185]
88. lipt1 ENSDARG00000025233 385 0.978 - - 0.978 - - - - - - lipoyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-060929-112]
89. fignl1 ENSDARG00000016427 636 0.978 - - 0.978 - - - - - - fidgetin-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1862]
90. PATZ1 ENSDARG00000076584 1116 0.978 - - 0.978 - - - - - - POZ (BTB) and AT hook containing zinc finger 1 [Source:ZFIN;Acc:ZDB-GENE-111223-4]
91. MED8 ENSDARG00000114425 459 0.978 - - 0.978 - - - - - - mediator complex subunit 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2091]
92. pdzrn3b ENSDARG00000073869 1566 0.978 - - 0.978 - - - - - - PDZ domain containing RING finger 3b [Source:ZFIN;Acc:ZDB-GENE-071022-4]
93. usp8 ENSDARG00000063719 643 0.978 - - 0.978 - - - - - - ubiquitin specific peptidase 8 [Source:ZFIN;Acc:ZDB-GENE-030131-1949]
94. arid1b ENSDARG00000092503 1376 0.978 - - 0.978 - - - - - - AT rich interactive domain 1B (SWI1-like) [Source:ZFIN;Acc:ZDB-GENE-030131-4459]
95. phf12a ENSDARG00000074303 1025 0.978 - - 0.978 - - - - - - PHD finger protein 12a [Source:ZFIN;Acc:ZDB-GENE-030131-3876]
96. pex5 ENSDARG00000070654, ENSDARG00000116156, ENSDARG00000116397 1427 0.977 - - 0.977 - - - - - - peroxisomal biogenesis factor 5 [Source:ZFIN;Acc:ZDB-GENE-040426-981]
97. arf4a ENSDARG00000045989, ENSDARG00000103858 2545 0.977 - - 0.977 - - - - - - ADP-ribosylation factor 4a [Source:ZFIN;Acc:ZDB-GENE-040801-109]
98. pnn ENSDARG00000015851 1269 0.977 - - 0.977 - - - - - - pinin, desmosome associated protein [Source:ZFIN;Acc:ZDB-GENE-060519-3]
99. si:ch211-125e6.8 ENSDARG00000094518 538 0.977 - - 0.977 - - - - - - si:ch211-125e6.8 [Source:ZFIN;Acc:ZDB-GENE-070912-42]
100. dtl ENSDARG00000023002 572 0.977 - - 0.977 - - - - - - denticleless E3 ubiquitin protein ligase homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-020419-34]

There are 864 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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