Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for pnkd

Gene Name Gene ID Reads Annotation
pnkd ENSDARG00000071032 447 PNKD, MBL domain containing [Source:ZFIN;Acc:ZDB-GENE-050208-278]










Genes with expression patterns similar to pnkd

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pnkd ENSDARG00000071032 447 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 PNKD, MBL domain containing [Source:ZFIN;Acc:ZDB-GENE-050208-278]
2. RBM26 ENSDARG00000104130 1012 1.715 - - - 0.860 - - - 0.855 - RNA binding motif protein 26 [Source:ZFIN;Acc:ZDB-GENE-050706-50]
3. CU570791.5 CU570791.5 872 1.709 - - - 0.862 - - 0.847 - -
4. adam9 ENSDARG00000010070 192 1.683 - - - - - - 0.782 0.901 - ADAM metallopeptidase domain 9 [Source:ZFIN;Acc:ZDB-GENE-040912-127]
5. si:ch73-387e10.3 si:ch73-387e10.3 517 1.677 - - - 0.855 - - - 0.822 -
6. CR381544.1 ENSDARG00000088187 821 1.672 - 0.830 - - - - - 0.842 -
7. dnajc5ab ENSDARG00000004836 2923 1.67 - - - 0.899 - - 0.771 - - DnaJ (Hsp40) homolog, subfamily C, member 5ab [Source:ZFIN;Acc:ZDB-GENE-081021-2]
8. pik3c3 ENSDARG00000054829 559 1.669 - - - 0.808 - - - 0.861 - phosphatidylinositol 3-kinase, catalytic subunit type 3 [Source:ZFIN;Acc:ZDB-GENE-050410-13]
9. fam172a ENSDARG00000052697 422 1.667 - - - 0.853 - - - 0.814 - family with sequence similarity 172, member A [Source:ZFIN;Acc:ZDB-GENE-040426-1396]
10. HYKK HYKK 261 1.659 - - - - - - 0.804 0.855 -
11. pop7 ENSDARG00000036394 1684 1.629 - - - 0.807 - - 0.822 - - POP7 homolog, ribonuclease P/MRP subunit [Source:ZFIN;Acc:ZDB-GENE-041010-88]
12. CABZ01080599.2 CABZ01080599.2 192 1.627 0.762 - - - - - - 0.865 -
13. nat15 ENSDARG00000061185 396 1.62 - - - 0.907 - 0.713 - - - N-acetyltransferase 15 (GCN5-related, putative) [Source:ZFIN;Acc:ZDB-GENE-041111-143]
14. CU683901.1 CU683901.1 187 1.617 0.732 - - 0.885 - - - - -
15. rprd2b ENSDARG00000074676 809 1.607 - - - 0.843 - - - 0.764 - regulation of nuclear pre-mRNA domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-110719-1]
16. si:ch211-250c4.3 si:ch211-250c4.3 677 1.604 - - - - - 0.724 0.880 - -
17. ANK1_1 ANK1_1 507 1.594 - - - 0.888 - - - 0.706 -
18. ZNF70_11 ZNF70_11 1246 1.582 - - - - - - 0.804 0.778 -
19. KANSL1_1 KANSL1_1 1809 1.579 - - - - - 0.782 0.797 - -
20. ndufaf4 ENSDARG00000077859 552 1.578 - - - 0.782 - - - 0.796 - NADH:ubiquinone oxidoreductase complex assembly factor 4 [Source:ZFIN;Acc:ZDB-GENE-060810-114]
21. ctdspla ENSDARG00000071673 1447 1.577 - - - 0.734 - - - 0.843 - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like a [Source:ZFIN;Acc:ZDB-GENE-060825-333]
22. dnajc18 ENSDARG00000056005 8084 1.574 - - - 0.842 - - - 0.732 - DnaJ (Hsp40) homolog, subfamily C, member 18 [Source:ZFIN;Acc:ZDB-GENE-030131-8019]
23. cbx4 ENSDARG00000099441 372 1.57 - - - 0.801 - - 0.769 - - chromobox homolog 4 (Pc class homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040329-2]
24. tdp2b ENSDARG00000035954, ENSDARG00000109349 478 1.57 - 0.729 - 0.841 - - - - - tyrosyl-DNA phosphodiesterase 2b [Source:ZFIN;Acc:ZDB-GENE-050816-1]
25. rnf220a ENSDARG00000060929 693 1.567 - - - 0.855 - - - 0.712 - ring finger protein 220a [Source:ZFIN;Acc:ZDB-GENE-060929-1006]
26. RUNDC1 ENSDARG00000091962 693 1.565 - - - - - 0.753 0.812 - - RUN domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25418]
27. atp6ap1a ENSDARG00000041417 898 1.559 - - - 0.813 - - - 0.746 - ATPase H+ transporting accessory protein 1a [Source:ZFIN;Acc:ZDB-GENE-090312-136]
28. rps6ka3b ENSDARG00000057927, ENSDARG00000109970 812 1.547 - - - - - - 0.764 0.783 - ribosomal protein S6 kinase, polypeptide 3b [Source:ZFIN;Acc:ZDB-GENE-070209-74]
29. abca1a ENSDARG00000074635 1085 1.543 - - - 0.750 - - 0.793 - - ATP-binding cassette, sub-family A (ABC1), member 1A [Source:ZFIN;Acc:ZDB-GENE-031006-12]
30. he2 945 1.539 - - - - - 0.745 0.794 - - hatching enzyme 2
31. ITCH ITCH 1226 1.532 - - - 0.820 - - 0.712 - -
32. nsd1a ENSDARG00000060016 2974 1.525 - - - 0.741 - - 0.784 - - nuclear receptor binding SET domain protein 1a [Source:ZFIN;Acc:ZDB-GENE-080519-3]
33. med19b ENSDARG00000009472 936 1.516 - - - 0.716 - - - 0.800 - mediator complex subunit 19b [Source:ZFIN;Acc:ZDB-GENE-040727-4]
34. gnpnat1 ENSDARG00000039892 709 1.514 - - - 0.779 - - 0.735 - - glucosamine-phosphate N-acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-050522-450]
35. emc4 ENSDARG00000039268 553 1.51 - - - 0.709 - - 0.801 - - ER membrane protein complex subunit 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1891]
36. pknox1.1_1 ENSDARG00000018765 203 1.508 0.760 - - 0.748 - - - - - pbx/knotted 1 homeobox 1.1 [Source:ZFIN;Acc:ZDB-GENE-020122-5]
37. ponzr1 ENSDARG00000090444 540 1.505 - 0.716 - - - - - 0.789 - plac8 onzin related protein 1 [Source:ZFIN;Acc:ZDB-GENE-070727-1]
38. si:dkey-193c22.2 ENSDARG00000076735 2791 1.503 - - - - - 0.754 0.749 - - si:dkey-193c22.2 [Source:ZFIN;Acc:ZDB-GENE-070705-337]
39. rxrbb ENSDARG00000002006, ENSDARG00000117079 1975 1.502 - - - - - - 0.770 0.732 - retinoid x receptor, beta b [Source:ZFIN;Acc:ZDB-GENE-990415-242]
40. chrac1 ENSDARG00000042337 2590 1.502 - - - 0.720 - - 0.782 - - chromatin accessibility complex 1 [Source:ZFIN;Acc:ZDB-GENE-050227-18]
41. aldh5a1 ENSDARG00000076544, ENSDARG00000113300 1021 1.498 - 0.767 - 0.731 - - - - - aldehyde dehydrogenase 5 family, member A1 (succinate-semialdehyde dehydrogenase) [Source:ZFIN;Acc:ZDB-GENE-070228-2]
42. usp42 ENSDARG00000077300 926 1.497 - 0.727 - 0.770 - - - - - ubiquitin specific peptidase 42 [Source:ZFIN;Acc:ZDB-GENE-030131-5739]
43. NIPBL NIPBL 871 1.495 - - - 0.754 - - 0.741 - -
44. fras1 ENSDARG00000054619, ENSDARG00000114204 4459 1.489 - - - - - 0.721 0.768 - - Fraser extracellular matrix complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-060526-68]
45. Mar-02 Mar-02 1812 1.474 - 0.717 - - - - 0.757 - -
46. fhl3b ENSDARG00000104315 359 1.47 - 0.701 - - - 0.769 - - - four and a half LIM domains 3b [Source:ZFIN;Acc:ZDB-GENE-030131-8356]
47. ralgps2 ENSDARG00000026519 1610 1.467 - - - - - - 0.738 0.729 - Ral GEF with PH domain and SH3 binding motif 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1212]
48. arhgap12a ENSDARG00000008548 757 1.46 - - - - - 0.701 0.759 - - Rho GTPase activating protein 12a [Source:ZFIN;Acc:ZDB-GENE-050809-38]
49. chsy1 ENSDARG00000079027 455 1.442 - - - - - 0.729 0.713 - - chondroitin sulfate synthase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3127]
50. casp7 ENSDARG00000091836 657 1.441 - - - - - - 0.731 0.710 - caspase 7, apoptosis-related cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-050522-506]
51. dnajc5gb ENSDARG00000017687, ENSDARG00000111738 855 1.434 - 0.727 - - - 0.707 - - - DnaJ (Hsp40) homolog, subfamily C, member 5 gamma b [Source:ZFIN;Acc:ZDB-GENE-040426-1238]
52. CU638740.1_1 CU638740.1_1 387 1.433 - - - 0.729 - - 0.704 - -
53. rprd1b ENSDARG00000038113 1105 1.433 - 0.713 - - - - 0.720 - - regulation of nuclear pre-mRNA domain containing 1B [Source:ZFIN;Acc:ZDB-GENE-030131-355]
54. rnaset2 ENSDARG00000036282 2226 1.427 - 0.720 - - - 0.707 - - - ribonuclease T2 [Source:ZFIN;Acc:ZDB-GENE-030131-2513]
55. ddb1 ENSDARG00000074431 1054 1.41 - - - 0.705 - - - 0.705 - damage-specific DNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1272]
56. VPS37B ENSDARG00000039319, ENSDARG00000109293 150 1.408 - 0.701 - - - - 0.707 - - vacuolar protein sorting 37 homolog B (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060526-254]
57. ikbkb ENSDARG00000079123 498 0.956 - - - - - - 0.956 - - inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta [Source:ZFIN;Acc:ZDB-GENE-071115-2]
58. znf395b ENSDARG00000024195 342 0.955 - - - 0.955 - - - - - zinc finger protein 395b [Source:ZFIN;Acc:ZDB-GENE-041001-193]
59. rgs20 ENSDARG00000038859 331 0.955 - - - 0.955 - - - - - regulator of G protein signaling 20 [Source:ZFIN;Acc:ZDB-GENE-040718-128]
60. si:ch211-113e8.11 ENSDARG00000076585 721 0.952 - - - 0.952 - - - - - si:ch211-113e8.11 [Source:ZFIN;Acc:ZDB-GENE-090313-12]
61. si:dkey-219c3.2 ENSDARG00000075805 619 0.947 - - - 0.947 - - - - - si:dkey-219c3.2 [Source:ZFIN;Acc:ZDB-GENE-090313-238]
62. C3H16orf13 C3H16orf13 652 0.943 - - - 0.943 - - - - -
63. LDLRAD4 LDLRAD4 1237 0.934 - - - 0.934 - - - - -
64. DHX35 ENSDARG00000063419 602 0.934 - - - 0.934 - - - - - DEAH-box helicase 35 [Source:HGNC Symbol;Acc:HGNC:15861]
65. vps26b ENSDARG00000015823, ENSDARG00000116682 1023 0.93 - - - 0.930 - - - - - VPS26, retromer complex component B [Source:ZFIN;Acc:ZDB-GENE-040426-2699]
66. pomgnt1 ENSDARG00000052025, ENSDARG00000111516 983 0.929 - - - - - - 0.929 - - protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-) [Source:ZFIN;Acc:ZDB-GENE-070112-991]
67. fam134c fam134c 1550 0.928 - - - - - - 0.928 - -
68. si:ch211-207j7.2 ENSDARG00000090793 316 0.916 - 0.916 - - - - - - - si:ch211-207j7.2 [Source:ZFIN;Acc:ZDB-GENE-120215-232]
69. JMJD1C JMJD1C 289 0.914 - - - 0.914 - - - - -
70. acsbg2 ENSDARG00000004094 2445 0.913 - - - 0.913 - - - - - acyl-CoA synthetase bubblegum family member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7099]
71. SIPA1L3 ENSDARG00000061699 268 0.913 - - - - - - 0.913 - - signal-induced proliferation-associated 1 like 3 [Source:ZFIN;Acc:ZDB-GENE-050420-109]
72. BCR ENSDARG00000079286 389 0.91 - - - - - - - 0.910 - breakpoint cluster region [Source:ZFIN;Acc:ZDB-GENE-040724-43]
73. lzic ENSDARG00000055899 638 0.906 - - - 0.906 - - - - - leucine zipper and CTNNBIP1 domain containing [Source:ZFIN;Acc:ZDB-GENE-040718-342]
74. mpzl2b ENSDARG00000027345, ENSDARG00000113465 575 0.906 - 0.906 - - - - - - - myelin protein zero-like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-8774]
75. wasb ENSDARG00000026350 139 0.904 - - - 0.904 - - - - - Wiskott-Aldrich syndrome (eczema-thrombocytopenia) b [Source:ZFIN;Acc:ZDB-GENE-030131-7098]
76. aanat2 ENSDARG00000079802 175 0.904 - - - 0.904 - - - - - arylalkylamine N-acetyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-991019-6]
77. zgc:165525 zgc:165525 207 0.904 - - - 0.904 - - - - -
78. SPTBN4_1 ENSDARG00000092624 473 0.904 - - - 0.904 - - - - - spectrin beta, non-erythrocytic 4 [Source:HGNC Symbol;Acc:HGNC:14896]
79. ftr65 202 0.903 - - - 0.903 - - - - - finTRIM family, member 65
80. GPN1 ENSDARG00000043928 566 0.903 - - - 0.903 - - - - - GPN-loop GTPase 1 [Source:ZFIN;Acc:ZDB-GENE-040801-154]
81. rs1 rs1 70 0.903 - - - 0.903 - - - - -
82. rapgef5a ENSDARG00000075271 282 0.903 - - - 0.903 - - - - - Rap guanine nucleotide exchange factor (GEF) 5a [Source:ZFIN;Acc:ZDB-GENE-030131-7681]
83. nr4a2b ENSDARG00000044532 103 0.902 - - - 0.902 - - - - - nuclear receptor subfamily 4, group A, member 2b [Source:ZFIN;Acc:ZDB-GENE-040718-103]
84. ulk3 ENSDARG00000101661 69 0.902 - - - 0.902 - - - - - unc-51 like kinase 3 [Source:ZFIN;Acc:ZDB-GENE-070410-33]
85. si:ch1073-127d16.1 ENSDARG00000087674 105 0.902 - - - 0.902 - - - - - si:ch1073-127d16.1 [Source:ZFIN;Acc:ZDB-GENE-120214-30]
86. cep76 ENSDARG00000058319 143 0.901 - - - 0.901 - - - - - centrosomal protein 76 [Source:ZFIN;Acc:ZDB-GENE-070820-5]
87. lhx9 ENSDARG00000056979 249 0.901 - - - 0.901 - - - - - LIM homeobox 9 [Source:ZFIN;Acc:ZDB-GENE-050417-210]
88. zgc:77486 ENSDARG00000013711, ENSDARG00000093978, ENSDARG00000111468, ENSDARG00000116962 139 0.901 - - - - - - 0.901 - - zgc:77486 [Source:ZFIN;Acc:ZDB-GENE-040426-2056]
89. TP53BP2 TP53BP2 217 0.901 - - - 0.901 - - - - -
90. ppfia2 ENSDARG00000013000 45 0.901 - - - 0.901 - - - - - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7905]
91. phf23b ENSDARG00000036305 1073 0.901 - - - - - - - 0.901 - PHD finger protein 23b [Source:ZFIN;Acc:ZDB-GENE-030131-5895]
92. tuba7l ENSDARG00000104643 33 0.901 - - - 0.901 - - - - - tubulin, alpha 7 like [Source:ZFIN;Acc:ZDB-GENE-040704-78]
93. ptk6b ENSDARG00000059956 44 0.901 - - - 0.901 - - - - - PTK6 protein tyrosine kinase 6b [Source:ZFIN;Acc:ZDB-GENE-060929-1150]
94. rxrba ENSDARG00000078954 85 0.9 - - - 0.900 - - - - - retinoid x receptor, beta a [Source:ZFIN;Acc:ZDB-GENE-980526-436]
95. tmem104 ENSDARG00000088560 859 0.9 - - - 0.900 - - - - - transmembrane protein 104 [Source:ZFIN;Acc:ZDB-GENE-070822-4]
96. gtf2a2 ENSDARG00000053685, ENSDARG00000109493, ENSDARG00000113094 515 0.9 - - - 0.900 - - - - - general transcription factor IIA, 2 [Source:ZFIN;Acc:ZDB-GENE-050522-513]
97. CU639413.2 CU639413.2 33 0.9 - - - 0.900 - - - - -
98. ZCCHC2 ENSDARG00000067950 204 0.9 - - - 0.900 - - - - - zinc finger, CCHC domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070912-269]
99. BX000999.4_1 BX000999.4_1 222 0.9 - - - 0.900 - - - - -
100. snupn ENSDARG00000008395 507 0.9 - - - 0.900 - - - - - snurportin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3464]

There are 1524 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA