Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for pmpcb

Gene Name Gene ID Reads Annotation
pmpcb ENSDARG00000016979 509 peptidase (mitochondrial processing) beta [Source:ZFIN;Acc:ZDB-GENE-050220-10]










Genes with expression patterns similar to pmpcb

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pmpcb ENSDARG00000016979 509 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 peptidase (mitochondrial processing) beta [Source:ZFIN;Acc:ZDB-GENE-050220-10]
2. C9H3orf38 C9H3orf38 83 1.645 - 0.892 - - - - - 0.753 -
3. taf1 ENSDARG00000035330 912 1.497 - 0.777 - - - - 0.720 - - TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-5576]
4. ms4a17a.2 ENSDARG00000105674 32 1.477 - 0.713 - - - - - 0.764 - membrane-spanning 4-domains, subfamily A, member 17a.2 [Source:ZFIN;Acc:ZDB-GENE-070705-367]
5. zgc:173994 zgc:173994 204 1.476 - 0.769 - 0.707 - - - - -
6. SMIM22 ENSDARG00000105068 246 1.472 - 0.743 - - - - - 0.729 - small integral membrane protein 22 [Source:HGNC Symbol;Acc:HGNC:48329]
7. CR925817.1 ENSDARG00000088362 62 1.466 - 0.715 - - - 0.751 - - -
8. PCDH12 ENSDARG00000076594 381 1.461 - 0.708 - - - - 0.753 - - protocadherin 12 [Source:ZFIN;Acc:ZDB-GENE-140106-126]
9. MIPEP ENSDARG00000055344 351 1.454 - 0.723 - - - - - 0.731 - mitochondrial intermediate peptidase [Source:ZFIN;Acc:ZDB-GENE-060503-662]
10. mecr ENSDARG00000032326 314 1.453 - 0.731 - - - - 0.722 - - mitochondrial trans-2-enoyl-CoA reductase [Source:ZFIN;Acc:ZDB-GENE-050417-399]
11. LYRM9 ENSDARG00000075528 329 1.437 - 0.726 - 0.711 - - - - - LYR motif containing 9 [Source:ZFIN;Acc:ZDB-GENE-081022-28]
12. map4k3a ENSDARG00000087742 771 1.415 0.701 0.714 - - - - - - - mitogen-activated protein kinase kinase kinase kinase 3a [Source:ZFIN;Acc:ZDB-GENE-130329-1]
13. rpz5 ENSDARG00000075718 1703 0.908 - 0.908 - - - - - - - rapunzel 5 [Source:ZFIN;Acc:ZDB-GENE-030131-4678]
14. CCDC106 CCDC106 1908 0.905 - 0.905 - - - - - - -
15. ipo9 ENSDARG00000016753, ENSDARG00000113327 936 0.887 - 0.887 - - - - - - - importin 9 [Source:ZFIN;Acc:ZDB-GENE-040426-2953]
16. klhl11 ENSDARG00000045130 800 0.88 - 0.880 - - - - - - - kelch-like family member 11 [Source:ZFIN;Acc:ZDB-GENE-030131-5524]
17. sh2d5 ENSDARG00000014324 228 0.877 - 0.877 - - - - - - - SH2 domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-050327-67]
18. FAM109B FAM109B 470 0.868 - 0.868 - - - - - - -
19. IPO11 ENSDARG00000054224 616 0.865 - 0.865 - - - - - - - importin 11 [Source:ZFIN;Acc:ZDB-GENE-040711-1]
20. C10H11orf63 C10H11orf63 65 0.863 - 0.863 - - - - - - -
21. fybb ENSDARG00000044694 136 0.863 - 0.863 - - - - - - - FYN binding protein b [Source:ZFIN;Acc:ZDB-GENE-091204-85]
22. rfk ENSDARG00000060522 546 0.863 - - - - - - 0.863 - - riboflavin kinase [Source:ZFIN;Acc:ZDB-GENE-081104-321]
23. CU459094.3 ENSDARG00000116047 300 0.858 - - - - - - 0.858 - -
24. ncapd3 ENSDARG00000034773, ENSDARG00000111405 823 0.858 - - - - - - 0.858 - - non-SMC condensin II complex, subunit D3 [Source:ZFIN;Acc:ZDB-GENE-040426-737]
25. si:dkey-253d23.3 ENSDARG00000095643 66 0.858 - 0.858 - - - - - - - si:dkey-253d23.3 [Source:ZFIN;Acc:ZDB-GENE-050208-330]
26. sspn ENSDARG00000041747, ENSDARG00000114109, ENSDARG00000114643 1228 0.852 - 0.852 - - - - - - - sarcospan (Kras oncogene-associated gene) [Source:ZFIN;Acc:ZDB-GENE-051127-43]
27. SLC24A2 ENSDARG00000042988 242 0.85 - 0.850 - - - - - - - solute carrier family 24 (sodium/potassium/calcium exchanger), member 2 [Source:ZFIN;Acc:ZDB-GENE-060825-277]
28. kpna1 ENSDARG00000016360 1275 0.849 - 0.849 - - - - - - - karyopherin alpha 1 (importin alpha 5) [Source:ZFIN;Acc:ZDB-GENE-091116-39]
29. dlx3b ENSDARG00000014626 3647 0.848 - - - - - 0.848 - - - distal-less homeobox 3b [Source:ZFIN;Acc:ZDB-GENE-980526-280]
30. tmem229b ENSDARG00000060569 516 0.847 - 0.847 - - - - - - - transmembrane protein 229B [Source:ZFIN;Acc:ZDB-GENE-060929-1154]
31. timp2b ENSDARG00000075261 867 0.847 - - - - - 0.847 - - - TIMP metallopeptidase inhibitor 2b [Source:ZFIN;Acc:ZDB-GENE-040426-2655]
32. smad9 368 0.844 - 0.844 - - - - - - - SMAD family member 9, transcript variant X1
33. pih1d3 ENSDARG00000038612, ENSDARG00000116391, ENSDARG00000116607 57 0.841 - 0.841 - - - - - - - PIH1 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040722-2]
34. thoc3 ENSDARG00000056517 909 0.839 - 0.839 - - - - - - - THO complex 3 [Source:ZFIN;Acc:ZDB-GENE-040808-14]
35. gadd45gip1 ENSDARG00000039338 1878 0.836 - 0.836 - - - - - - - growth arrest and DNA-damage-inducible, gamma interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-091204-282]
36. raf1b ENSDARG00000059406 301 0.836 - 0.836 - - - - - - - Raf-1 proto-oncogene, serine/threonine kinase b [Source:ZFIN;Acc:ZDB-GENE-090826-2]
37. tspan11 ENSDARG00000001781 743 0.835 - 0.835 - - - - - - - tetraspanin 11 [Source:ZFIN;Acc:ZDB-GENE-041210-93]
38. ptdss1 ptdss1 1143 0.834 - 0.834 - - - - - - -
39. armc1l ENSDARG00000020887 1219 0.832 - 0.832 - - - - - - - armadillo repeat containing 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-9819]
40. btk ENSDARG00000004433 106 0.831 - 0.831 - - - - - - - Bruton agammaglobulinemia tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-070531-1]
41. gpr161 ENSDARG00000055659 454 0.831 - 0.831 - - - - - - - G protein-coupled receptor 161 [Source:ZFIN;Acc:ZDB-GENE-030616-58]
42. zgc:171566 ENSDARG00000105118 340 0.83 - 0.830 - - - - - - - zgc:171566 [Source:ZFIN;Acc:ZDB-GENE-050309-193]
43. zgc:100920 ENSDARG00000042961, ENSDARG00000112929 1384 0.83 - 0.830 - - - - - - - zgc:100920 [Source:ZFIN;Acc:ZDB-GENE-040801-156]
44. C4H12orf66 C4H12orf66 640 0.828 - - - - - - 0.828 - -
45. ubap2l ENSDARG00000063219 1147 0.826 - 0.826 - - - - - - - ubiquitin associated protein 2-like [Source:ZFIN;Acc:ZDB-GENE-060503-244]
46. st6galnac5b ENSDARG00000057433, ENSDARG00000110829 248 0.825 - 0.825 - - - - - - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5b [Source:ZFIN;Acc:ZDB-GENE-040912-25]
47. fosl2 ENSDARG00000040623 2041 0.822 - - - - - - - 0.822 - fos-like antigen 2 [Source:ZFIN;Acc:ZDB-GENE-070209-164]
48. COL13A1 1565 0.821 - - - - - 0.821 - - - collagen, type XIII, alpha 1, transcript variant X1
49. stat2 ENSDARG00000031647, ENSDARG00000116348 441 0.82 - 0.820 - - - - - - - signal transducer and activator of transcription 2 [Source:ZFIN;Acc:ZDB-GENE-080321-1]
50. ppwd1 ENSDARG00000063161 752 0.82 - 0.820 - - - - - - - peptidylprolyl isomerase domain and WD repeat containing 1 [Source:ZFIN;Acc:ZDB-GENE-070615-16]
51. CR774184.1 ENSDARG00000096891 404 0.818 0.818 - - - - - - - -
52. slc6a13 369 0.817 - 0.817 - - - - - - - solute carrier family 6 (neurotransmitter transporter), member 13, transcript variant X1
53. im:6904045 ENSDARG00000115174 179 0.817 - 0.817 - - - - - - - im:6904045 [Source:ZFIN;Acc:ZDB-GENE-050506-75]
54. adcy6a ENSDARG00000061445, ENSDARG00000114782 500 0.816 - 0.816 - - - - - - - adenylate cyclase 6a [Source:ZFIN;Acc:ZDB-GENE-060221-1]
55. C1H3orf70 C1H3orf70 634 0.816 - 0.816 - - - - - - -
56. cyp27a7 ENSDARG00000033802 216 0.816 - - - - - - - 0.816 - cytochrome P450, family 27, subfamily A, polypeptide 7 [Source:ZFIN;Acc:ZDB-GENE-081104-519]
57. eif4e2rs1 ENSDARG00000015835 589 0.815 - 0.815 - - - - - - - eukaryotic translation initiation factor 4E family member 2 related sequence 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1728]
58. cry3 cry3 483 0.815 - - - - - - 0.815 - -
59. mpx ENSDARG00000019521 562 0.815 - 0.815 - - - - - - - myeloid-specific peroxidase [Source:ZFIN;Acc:ZDB-GENE-030131-9460]
60. dcakd ENSDARG00000061638 120 0.814 - 0.814 - - - - - - - dephospho-CoA kinase domain containing [Source:ZFIN;Acc:ZDB-GENE-060825-226]
61. actr10 ENSDARG00000038432 1598 0.814 - 0.814 - - - - - - - ARP10 actin related protein 10 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-768]
62. BX855614.1 ENSDARG00000094551 1294 0.813 - 0.813 - - - - - - - si:dkey-262g12.9 [Source:NCBI gene;Acc:555910]
63. HYKK HYKK 261 0.813 - 0.813 - - - - - - -
64. pou3f3a ENSDARG00000042032 2835 0.812 - 0.812 - - - - - - - POU class 3 homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-980526-220]
65. rit1 ENSDARG00000069150 520 0.812 - 0.812 - - - - - - - Ras-like without CAAX 1 [Source:ZFIN;Acc:ZDB-GENE-070912-329]
66. metrnl 1042 0.811 - 0.811 - - - - - - - meteorin, glial cell differentiation regulator-like
67. rltgr ENSDARG00000096533 33 0.81 - 0.810 - - - - - - - RAMP-like triterpene glycoside receptor [Source:ZFIN;Acc:ZDB-GENE-100727-4]
68. clock3 clock3 136 0.809 - 0.809 - - - - - - -
69. fam13b ENSDARG00000076779 1130 0.809 - 0.809 - - - - - - - family with sequence similarity 13, member B [Source:ZFIN;Acc:ZDB-GENE-030131-4913]
70. trpc4apb ENSDARG00000020647 670 0.808 - - - - - - - 0.808 - transient receptor potential cation channel, subfamily C, member 4 associated protein b [Source:ZFIN;Acc:ZDB-GENE-000330-2]
71. rangap1b ENSDARG00000056059, ENSDARG00000115814 1109 0.808 - 0.808 - - - - - - - Ran GTPase activating protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1921]
72. stk33 ENSDARG00000054318, ENSDARG00000114909 34 0.807 - 0.807 - - - - - - - serine/threonine kinase 33 [Source:ZFIN;Acc:ZDB-GENE-040724-242]
73. rapgef1a ENSDARG00000043593 416 0.807 - 0.807 - - - - - - - Rap guanine nucleotide exchange factor (GEF) 1a [Source:ZFIN;Acc:ZDB-GENE-081105-26]
74. ubald1a ENSDARG00000002362 181 0.806 - 0.806 - - - - - - - UBA-like domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-040718-191]
75. si:ch211-270n8.4 87 0.805 - 0.805 - - - - - - - si:ch211-270n8.4
76. jam2b ENSDARG00000079071 1031 0.804 - 0.804 - - - - - - - junctional adhesion molecule 2b [Source:ZFIN;Acc:ZDB-GENE-080229-3]
77. rfx2 ENSDARG00000013575 1275 0.804 0.804 - - - - - - - - regulatory factor X, 2 (influences HLA class II expression) [Source:ZFIN;Acc:ZDB-GENE-050227-4]
78. igsf21a ENSDARG00000031049 165 0.801 - 0.801 - - - - - - - immunoglobin superfamily, member 21a [Source:ZFIN;Acc:ZDB-GENE-050809-118]
79. zgc:123010 ENSDARG00000039082 870 0.801 - 0.801 - - - - - - - zgc:123010 [Source:ZFIN;Acc:ZDB-GENE-051120-15]
80. kctd10 ENSDARG00000017115 1659 0.801 - 0.801 - - - - - - - potassium channel tetramerization domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-040426-2843]
81. zgc:113295 ENSDARG00000074768, ENSDARG00000103947 36 0.798 - 0.798 - - - - - - - zgc:113295 [Source:ZFIN;Acc:ZDB-GENE-050320-122]
82. tmem39b ENSDARG00000018956 590 0.798 - 0.798 - - - - - - - transmembrane protein 39B [Source:ZFIN;Acc:ZDB-GENE-030131-6042]
83. vgll4l ENSDARG00000068409, ENSDARG00000110132 844 0.797 - - - - - 0.797 - - - vestigial like 4 like [Source:ZFIN;Acc:ZDB-GENE-070112-1682]
84. zgc:91985 zgc:91985 1517 0.797 - - - - - 0.797 - - -
85. BX908793.1 BX908793.1 573 0.796 - - - - - 0.796 - - -
86. col7a1l ENSDARG00000069692 44 0.796 - 0.796 - - - - - - - collagen type VII alpha 1-like [Source:ZFIN;Acc:ZDB-GENE-030131-9861]
87. ESCO1 ENSDARG00000077057 1112 0.796 - 0.796 - - - - - - - establishment of sister chromatid cohesion N-acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-130530-818]
88. atxn10 ENSDARG00000008439 156 0.796 - 0.796 - - - - - - - ataxin 10 [Source:ZFIN;Acc:ZDB-GENE-060503-180]
89. tsfm ENSDARG00000060748, ENSDARG00000110047 1003 0.795 - 0.795 - - - - - - - Ts translation elongation factor, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-061215-17]
90. TACC2 1702 0.795 - 0.795 - - - - - - - transforming, acidic coiled-coil containing protein 2, transcript variant X17
91. rilpl2 ENSDARG00000024818, ENSDARG00000112872, ENSDARG00000114989 343 0.794 - - - - - - - 0.794 - Rab interacting lysosomal protein-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6682]
92. TMEM66 TMEM66 487 0.794 - - - - - - - 0.794 -
93. suz12b ENSDARG00000098924, ENSDARG00000114239, ENSDARG00000114524 1947 0.794 - 0.794 - - - - - - - SUZ12, polycomb repressive complex 2 subunit b [Source:ZFIN;Acc:ZDB-GENE-030131-3255]
94. C19H18orf21 C19H18orf21 338 0.793 - - - - - - - 0.793 -
95. agps ENSDARG00000042821 203 0.793 - - - - - - - 0.793 - alkylglycerone phosphate synthase [Source:ZFIN;Acc:ZDB-GENE-031118-14]
96. aif1l ENSDARG00000009336 1340 0.793 0.793 - - - - - - - - allograft inflammatory factor 1-like [Source:ZFIN;Acc:ZDB-GENE-030131-9646]
97. BX004816.4 BX004816.4 33 0.792 - - - - - 0.792 - - -
98. CERS4 CERS4 319 0.792 - 0.792 - - - - - - -
99. iars2 ENSDARG00000044134 1990 0.792 - - - - - - 0.792 - - isoleucyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030616-608]
100. rft1 ENSDARG00000060398 146 0.792 - 0.792 - - - - - - - RFT1 homolog [Source:ZFIN;Acc:ZDB-GENE-110411-126]

There are 589 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA