Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for pls3

Gene Name Gene ID Reads Annotation
pls3 ENSDARG00000037655 5175 plastin 3 (T isoform) [Source:ZFIN;Acc:ZDB-GENE-040718-10]










Genes with expression patterns similar to pls3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pls3 ENSDARG00000037655 5175 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 plastin 3 (T isoform) [Source:ZFIN;Acc:ZDB-GENE-040718-10]
2. acaa1 ENSDARG00000004687 557 2.522 - 0.809 - - - 0.948 0.765 - - acetyl-CoA acyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040704-48]
3. vasp vasp 3925 2.395 - 0.734 - - - - 0.905 - 0.756
4. grhl1 ENSDARG00000061391 1494 2.39 0.724 - - - - 0.952 0.714 - - grainyhead-like transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3665]
5. col12a1b ENSDARG00000019601 9985 2.386 0.707 - - - - 0.953 0.726 - - collagen, type XII, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-120215-116]
6. b3gnt2l ENSDARG00000068219 1875 2.378 0.734 0.847 - - - - 0.797 - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2, like [Source:ZFIN;Acc:ZDB-GENE-061207-60]
7. esyt2a ENSDARG00000030824 1907 2.373 0.777 0.822 - - - - 0.774 - - extended synaptotagmin-like protein 2a [Source:ZFIN;Acc:ZDB-GENE-070912-588]
8. copz2 ENSDARG00000006786, ENSDARG00000112084 4375 2.338 - 0.748 0.776 - - - 0.814 - - coatomer protein complex, subunit zeta 2 [Source:ZFIN;Acc:ZDB-GENE-000406-5]
9. shc1 ENSDARG00000075437 3278 2.32 0.710 0.835 - - - - 0.775 - - SHC (Src homology 2 domain containing) transforming protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2538]
10. man1a1 ENSDARG00000005652 877 2.241 0.792 0.743 - - - - 0.706 - - mannosidase, alpha, class 1A, member 1 [Source:ZFIN;Acc:ZDB-GENE-041014-321]
11. dlx3b ENSDARG00000014626 3647 2.21 - 0.723 - - - - 0.750 - 0.737 distal-less homeobox 3b [Source:ZFIN;Acc:ZDB-GENE-980526-280]
12. dgkaa ENSDARG00000060626, ENSDARG00000110977 2315 1.851 - - - - - 0.948 0.903 - - diacylglycerol kinase, alpha a [Source:ZFIN;Acc:ZDB-GENE-060616-305]
13. cdc42l ENSDARG00000040158, ENSDARG00000116748 11671 1.811 - - - - - 0.969 0.842 - - cell division cycle 42, like [Source:ZFIN;Acc:ZDB-GENE-030131-6069]
14. smim14 ENSDARG00000005799, ENSDARG00000110934 1094 1.795 - 0.933 - - - - 0.862 - - small integral membrane protein 14 [Source:ZFIN;Acc:ZDB-GENE-040426-22]
15. rnf183 ENSDARG00000068851 2427 1.787 - - - - - 0.969 0.818 - - ring finger protein 183 [Source:ZFIN;Acc:ZDB-GENE-060929-1090]
16. ugt1b4 ENSDARG00000097024 1848 1.783 - 0.856 - - - - 0.927 - - UDP glucuronosyltransferase 1 family, polypeptide B4 [Source:ZFIN;Acc:ZDB-GENE-080227-13]
17. pdlim1 ENSDARG00000019845 5765 1.782 - - - - - - 0.918 - 0.864 PDZ and LIM domain 1 (elfin) [Source:ZFIN;Acc:ZDB-GENE-030131-5227]
18. ywhabb ENSDARG00000075758 23104 1.773 - - - - - 0.930 0.843 - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide b [Source:ZFIN;Acc:ZDB-GENE-040426-2160]
19. xbp1 ENSDARG00000035622 18416 1.77 - - - - - 0.927 0.843 - - X-box binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-011210-2]
20. atic ENSDARG00000016706 6032 1.759 - - - - - 0.887 0.872 - - 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase [Source:ZFIN;Acc:ZDB-GENE-011212-4]
21. stra6 ENSDARG00000051874, ENSDARG00000115031 1625 1.758 - - - - - 0.954 0.804 - - stimulated by retinoic acid 6 [Source:ZFIN;Acc:ZDB-GENE-060616-252]
22. stag2b ENSDARG00000053668, ENSDARG00000109728 7193 1.742 - - - - - 0.976 0.766 - - stromal antigen 2b [Source:ZFIN;Acc:ZDB-GENE-030131-2785]
23. HOMER2 ENSDARG00000059349 2264 1.734 - - - - - 0.960 0.774 - - homer scaffold protein 2 [Source:ZFIN;Acc:ZDB-GENE-050522-417]
24. PIK3CA_1 PIK3CA_1 4065 1.731 0.787 - - - - 0.944 - - -
25. fam219aa ENSDARG00000016396 1788 1.728 0.798 0.930 - - - - - - - family with sequence similarity 219, member Aa [Source:ZFIN;Acc:ZDB-GENE-040801-110]
26. atp8a2 ENSDARG00000077492 3637 1.728 0.865 - - - - - 0.863 - - ATPase phospholipid transporting 8A2 [Source:ZFIN;Acc:ZDB-GENE-100209-2]
27. arcn1a ENSDARG00000002792 2847 1.727 0.901 - - - - - 0.826 - - archain 1a [Source:ZFIN;Acc:ZDB-GENE-021031-2]
28. gnpda1 ENSDARG00000037307, ENSDARG00000109317, ENSDARG00000114846 2191 1.711 0.871 - - - - - 0.840 - - glucosamine-6-phosphate deaminase 1 [Source:ZFIN;Acc:ZDB-GENE-050417-417]
29. elovl7b ENSDARG00000100185 2032 1.709 0.928 - - - - - 0.781 - - ELOVL fatty acid elongase 7b [Source:ZFIN;Acc:ZDB-GENE-030131-5485]
30. vps28 ENSDARG00000103203 4991 1.701 - - - - - 0.977 0.724 - - vacuolar protein sorting 28 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1527]
31. mogat3b ENSDARG00000003635 394 1.699 - 0.880 - - - - 0.819 - - monoacylglycerol O-acyltransferase 3b [Source:ZFIN;Acc:ZDB-GENE-110302-2]
32. spint2 ENSDARG00000069476, ENSDARG00000113265 4147 1.688 0.919 - - - - - 0.769 - - serine peptidase inhibitor, Kunitz type, 2 [Source:ZFIN;Acc:ZDB-GENE-061013-323]
33. col18a1 col18a1 20555 1.688 0.785 - - - - - 0.903 - -
34. COL4A3BP COL4A3BP 3288 1.685 0.866 - - - - - 0.819 - -
35. naga ENSDARG00000099313 2483 1.68 - 0.881 - - - - 0.799 - - N-acetylgalactosaminidase, alpha [Source:ZFIN;Acc:ZDB-GENE-051113-256]
36. pafah1b1a ENSDARG00000032013 3183 1.68 - - - - - 0.944 0.736 - - platelet-activating factor acetylhydrolase 1b, regulatory subunit 1a [Source:ZFIN;Acc:ZDB-GENE-040116-2]
37. fdps ENSDARG00000040890 4000 1.679 0.763 - - - - - 0.916 - - farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase, dimethylallyltranstransferase, geranyltranstransferase) [Source:ZFIN;Acc:ZDB-GENE-050506-78]
38. CABZ01057488.1 ENSDARG00000110427 598 1.678 0.827 - - - - - 0.851 - -
39. rab5c ENSDARG00000026712 4733 1.676 0.893 - - - - - 0.783 - - RAB5C, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-031118-30]
40. tfg ENSDARG00000003641, ENSDARG00000115188 3834 1.676 0.839 - - - - - 0.837 - - trk-fused gene [Source:ZFIN;Acc:ZDB-GENE-030131-8410]
41. hmgn3 ENSDARG00000036754, ENSDARG00000116728 11573 1.673 - - - - - 0.952 0.721 - - high mobility group nucleosomal binding domain 3 [Source:ZFIN;Acc:ZDB-GENE-041114-180]
42. gstt1a ENSDARG00000042428, ENSDARG00000110738 3098 1.664 0.789 - - - - - 0.875 - - glutathione S-transferase theta 1a [Source:ZFIN;Acc:ZDB-GENE-031001-13]
43. mphosph8 ENSDARG00000005576, ENSDARG00000114033 5350 1.663 - - - - - 0.944 0.719 - - M-phase phosphoprotein 8 [Source:ZFIN;Acc:ZDB-GENE-050309-191]
44. hoga1 ENSDARG00000018944 800 1.661 - 0.799 - - - - 0.862 - - 4-hydroxy-2-oxoglutarate aldolase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2242]
45. rpe65b ENSDARG00000094752, ENSDARG00000113621 463 1.661 - 0.915 - - - - 0.746 - - retinal pigment epithelium-specific protein 65b [Source:ZFIN;Acc:ZDB-GENE-050410-16]
46. cyp2aa9 ENSDARG00000098890 839 1.656 0.916 - - - - - 0.740 - - cytochrome P450, family 2, subfamily AA, polypeptide 9 [Source:ZFIN;Acc:ZDB-GENE-080724-3]
47. hmox1 hmox1 1391 1.653 0.829 - - - - - 0.824 - -
48. PVRL4_1 PVRL4_1 702 1.653 0.894 0.759 - - - - - - -
49. larp6 1695 1.653 0.832 - - - - - 0.821 - - La ribonucleoprotein domain family, member 6
50. myh9a ENSDARG00000063295 27935 1.646 - - - - - - 0.942 - 0.704 myosin, heavy chain 9a, non-muscle [Source:ZFIN;Acc:ZDB-GENE-030131-5870]
51. msxb msxb 2650 1.642 - 0.852 - - - - - - 0.790
52. si:ch211-105c13.3 ENSDARG00000089441 13973 1.641 - 0.879 - - - - 0.762 - - si:ch211-105c13.3 [Source:ZFIN;Acc:ZDB-GENE-030131-4483]
53. si:dkey-118j18.2 ENSDARG00000096457 5293 1.64 - - 0.702 - - 0.938 - - - si:dkey-118j18.2 [Source:ZFIN;Acc:ZDB-GENE-030131-8692]
54. pcbd1 ENSDARG00000031981 3373 1.637 - 0.714 - - - - 0.923 - - pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha [Source:ZFIN;Acc:ZDB-GENE-040426-1787]
55. im:7150988 ENSDARG00000109310 28520 1.636 0.745 - - - - 0.891 - - - im:7150988 [Source:ZFIN;Acc:ZDB-GENE-050309-169]
56. dad1 ENSDARG00000102105 14788 1.635 - - - - - 0.862 0.773 - - defender against cell death 1 [Source:ZFIN;Acc:ZDB-GENE-060503-233]
57. adamts1 ENSDARG00000103519 539 1.632 0.776 0.856 - - - - - - - ADAM metallopeptidase with thrombospondin type 1 motif, 1 [Source:ZFIN;Acc:ZDB-GENE-070814-1]
58. sphk2 ENSDARG00000069893 1518 1.632 - 0.880 - - - - - - 0.752 sphingosine kinase 2 [Source:ZFIN;Acc:ZDB-GENE-100922-225]
59. fcho2 ENSDARG00000035389, ENSDARG00000112245 1996 1.632 - 0.876 - - - - 0.756 - - FCH domain only 2 [Source:ZFIN;Acc:ZDB-GENE-050522-228]
60. CU633910.1 CU633910.1 828 1.631 - 0.742 - - - - 0.889 - -
61. arf1 ENSDARG00000009484 5034 1.629 0.834 - - - - - 0.795 - - ADP-ribosylation factor 1 [Source:ZFIN;Acc:ZDB-GENE-010724-5]
62. stk10 ENSDARG00000101894 1587 1.628 0.796 - - - - - 0.832 - - serine/threonine kinase 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1136]
63. CABZ01080098.1 ENSDARG00000110680 10942 1.627 - 0.867 - - - - 0.760 - -
64. arpc2 ENSDARG00000075989 22423 1.626 - - - - - 0.879 0.747 - - actin related protein 2/3 complex, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5276]
65. furina ENSDARG00000062909, ENSDARG00000117158 6313 1.625 0.730 - - - - - 0.895 - - furin (paired basic amino acid cleaving enzyme) a [Source:ZFIN;Acc:ZDB-GENE-040901-1]
66. nccrp1 ENSDARG00000035326, ENSDARG00000113175 11385 1.624 - - - - - - 0.889 0.735 - non-specific cytotoxic cell receptor protein 1 [Source:ZFIN;Acc:ZDB-GENE-000210-13]
67. lamp2 ENSDARG00000014914 5035 1.622 - - - - - - 0.874 - 0.748 lysosomal-associated membrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-030729-9]
68. mid1ip1a ENSDARG00000041051 5425 1.62 0.823 0.797 - - - - - - - MID1 interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-990415-81]
69. sec61b ENSDARG00000076568 11859 1.619 - - - - - - 0.842 - 0.777 Sec61 translocon beta subunit [Source:ZFIN;Acc:ZDB-GENE-040718-260]
70. ACTR3 ENSDARG00000091138 1739 1.617 0.757 - - - - - 0.860 - - ARP3 actin related protein 3 homolog [Source:ZFIN;Acc:ZDB-GENE-040428-2]
71. C1H4orf33 C1H4orf33 2097 1.616 0.818 - - - - - 0.798 - -
72. amotl2b ENSDARG00000061948 974 1.615 0.894 - - - - - 0.721 - - angiomotin like 2b [Source:ZFIN;Acc:ZDB-GENE-061103-307]
73. gale ENSDARG00000002401 5489 1.614 0.713 - - - - - 0.901 - - UDP-galactose-4-epimerase [Source:ZFIN;Acc:ZDB-GENE-060421-6479]
74. degs2 ENSDARG00000042544 1912 1.614 0.865 - - - - - 0.749 - - delta(4)-desaturase, sphingolipid 2 [Source:ZFIN;Acc:ZDB-GENE-080228-1]
75. elmod2 ENSDARG00000101669 3101 1.613 - 0.811 - - - - 0.802 - - ELMO/CED-12 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060824-2]
76. si:ch211-232i5.3 ENSDARG00000086874 1256 1.612 0.854 - - - - - 0.758 - - si:ch211-232i5.3 [Source:ZFIN;Acc:ZDB-GENE-091204-88]
77. ptplb ptplb 6135 1.612 0.792 - - - - - 0.820 - -
78. perp ENSDARG00000063572 6423 1.611 - - - - - - 0.844 - 0.767 PERP, TP53 apoptosis effector [Source:ZFIN;Acc:ZDB-GENE-050104-1]
79. GCA GCA 5211 1.609 - - - - - - 0.777 - 0.832
80. sult2st1_1 ENSDARG00000033170 3074 1.605 - 0.750 - - - - 0.855 - - sulfotransferase family 2, cytosolic sulfotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030219-114]
81. cldne ENSDARG00000043128 6960 1.603 - - - - - - 0.837 - 0.766 claudin e [Source:ZFIN;Acc:ZDB-GENE-010328-5]
82. dsg2 dsg2 4039 1.602 - 0.714 - - - - 0.888 - -
83. bach1 bach1 1121 1.599 0.868 - - - - - 0.731 - -
84. itgb1b.1 ENSDARG00000053232 4721 1.597 0.772 - - - - - 0.825 - - integrin, beta 1b.1 [Source:ZFIN;Acc:ZDB-GENE-060803-3]
85. bmp4 ENSDARG00000019995 2038 1.597 0.837 - - - - - 0.760 - - bone morphogenetic protein 4 [Source:ZFIN;Acc:ZDB-GENE-980528-2059]
86. ywhaz ENSDARG00000032575 15257 1.591 - - - - - - 0.841 - 0.750 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide [Source:ZFIN;Acc:ZDB-GENE-030131-8554]
87. gcat ENSDARG00000005643 1104 1.59 0.800 - - - - - 0.790 - - glycine C-acetyltransferase [Source:ZFIN;Acc:ZDB-GENE-060518-3]
88. galnt12 ENSDARG00000055490 1653 1.588 0.870 - - - - - 0.718 - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 [Source:ZFIN;Acc:ZDB-GENE-060503-704]
89. slc20a1b ENSDARG00000010641 2564 1.588 0.844 0.744 - - - - - - - solute carrier family 20 (phosphate transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-030131-260]
90. rps6ka3a ENSDARG00000035556, ENSDARG00000116641 3608 1.585 - 0.717 - - - - 0.868 - - ribosomal protein S6 kinase a, polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-030219-119]
91. spns1 ENSDARG00000011925, ENSDARG00000111727 3126 1.585 0.760 - - - - - 0.825 - - spinster homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-020228-1]
92. bcap31 ENSDARG00000044972 8708 1.584 - - - - - - 0.853 0.731 - B cell receptor associated protein 31 [Source:ZFIN;Acc:ZDB-GENE-030616-63]
93. gna15.1 ENSDARG00000016364 754 1.584 0.870 - - - - - 0.714 - - guanine nucleotide binding protein (G protein), alpha 15 (Gq class), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-040801-146]
94. zgc:55512 zgc:55512 4436 1.583 0.804 - - - - - 0.779 - -
95. sqstm1 ENSDARG00000075014 2392 1.583 0.784 - - - - - 0.799 - - sequestosome 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2204]
96. mfsd6a ENSDARG00000032318 228 1.583 - 0.854 - - - - 0.729 - - major facilitator superfamily domain containing 6a [Source:ZFIN;Acc:ZDB-GENE-050208-335]
97. limk2 ENSDARG00000005104 2598 1.583 - 0.873 - - - - 0.710 - - LIM domain kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040718-398]
98. entpd2a.2 ENSDARG00000033953 389 1.581 0.815 0.766 - - - - - - - ectonucleoside triphosphate diphosphohydrolase 2a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040724-67]
99. gorasp1 gorasp1 3075 1.579 - 0.830 - - - - 0.749 - -
100. stx2b ENSDARG00000068217 2567 1.578 0.799 - - - - - 0.779 - - syntaxin 2b [Source:ZFIN;Acc:ZDB-GENE-091204-424]

There are 1674 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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