Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for plod3_1

Gene Name Gene ID Reads Annotation
plod3_1 ENSDARG00000076317 80 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3 [Source:ZFIN;Acc:ZDB-GENE-021031-4]










Genes with expression patterns similar to plod3_1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. plod3_1 ENSDARG00000076317 80 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3 [Source:ZFIN;Acc:ZDB-GENE-021031-4]
2. mgat3 mgat3 195 1.691 0.797 0.894 - - - - - - -
3. MUC5AC MUC5AC 32 1.659 0.882 - - - - 0.777 - - -
4. CU596012.1 CU596012.1 24 1.655 0.838 0.817 - - - - - - -
5. fam178a fam178a 29 1.641 - 0.817 - - - - 0.824 - -
6. C19H1orf172 C19H1orf172 105 1.638 0.853 0.785 - - - - - - -
7. zgc:110377 zgc:110377 193 1.632 0.765 0.867 - - - - - - -
8. si:ch211-194e1.8 si:ch211-194e1.8 14 1.607 - 0.847 - - 0.760 - - - -
9. si:dkey-88n24.8 ENSDARG00000091095 9 1.596 - 0.817 - - - - 0.779 - - si:dkey-88n24.8 [Source:ZFIN;Acc:ZDB-GENE-041014-92]
10. si:ch211-207e7.1 si:ch211-207e7.1 33 1.589 - 0.821 - - 0.768 - - - -
11. bfb ENSDARG00000005616, ENSDARG00000110364 30 1.584 0.875 0.709 - - - - - - - complement component bfb [Source:ZFIN;Acc:ZDB-GENE-990415-34]
12. poldip2 ENSDARG00000092305, ENSDARG00000112927, ENSDARG00000117099 88 1.561 0.776 - - - - - 0.785 - - polymerase (DNA-directed), delta interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5881]
13. C13H6orf203 C13H6orf203 881 1.561 0.733 0.828 - - - - - - -
14. C3H17orf53 C3H17orf53 191 1.545 - 0.780 - - - - 0.765 - -
15. TP53BP2 TP53BP2 217 1.538 - 0.730 - - - 0.808 - - -
16. si:dkey-103d23.5 26 1.513 - 0.797 - - - - 0.716 - - si:dkey-103d23.5
17. eml3 ENSDARG00000058038 449 1.483 0.706 0.777 - - - - - - - echinoderm microtubule associated protein like 3 [Source:ZFIN;Acc:ZDB-GENE-110304-3]
18. ndufa13 160 1.481 0.761 - - - - - 0.720 - - NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13
19. DNHD1 DNHD1 4 1.48 - - - - - 0.701 0.779 - -
20. si:dkey-192i18.3 si:dkey-192i18.3 47 1.441 - - - - 0.740 0.701 - - -
21. AL772300.3 AL772300.3 1752 1.434 - 0.714 - - - 0.720 - - -
22. pcmtl ENSDARG00000042848, ENSDARG00000110149 301 0.94 - 0.940 - - - - - - - l-isoaspartyl protein carboxyl methyltransferase, like [Source:ZFIN;Acc:ZDB-GENE-040426-1738]
23. klhl38 klhl38 44 0.937 - - - - - - 0.937 - -
24. tph1b ENSDARG00000036082, ENSDARG00000112888 79 0.937 - - - - - - 0.937 - - tryptophan hydroxylase 1b [Source:ZFIN;Acc:ZDB-GENE-030805-6]
25. zgc:92880 zgc:92880 56 0.937 - - - - - - 0.937 - -
26. nhlrc2 ENSDARG00000089581, ENSDARG00000113639 40 0.937 - - - - - - 0.937 - - NHL repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-100318-2]
27. ZNF784_2 ZNF784_2 181 0.935 - 0.935 - - - - - - -
28. lnx2a ENSDARG00000029177, ENSDARG00000112805 121 0.929 0.929 - - - - - - - - ligand of numb-protein X 2a [Source:ZFIN;Acc:ZDB-GENE-060228-2]
29. wu:fc17b08 ENSDARG00000094249 427 0.926 - - - - - - 0.926 - - wu:fc17b08 [Source:ZFIN;Acc:ZDB-GENE-030131-2746]
30. DNAJC30 DNAJC30 47 0.922 0.922 - - - - - - - -
31. dbpb ENSDARG00000057652, ENSDARG00000116703 71 0.922 0.922 - - - - - - - - D site albumin promoter binding protein b [Source:ZFIN;Acc:ZDB-GENE-100922-6]
32. arv1 ENSDARG00000074757 227 0.919 - 0.919 - - - - - - - ARV1 homolog, fatty acid homeostasis modulator [Source:ZFIN;Acc:ZDB-GENE-080204-35]
33. CU855815.2 CU855815.2 80 0.915 - 0.915 - - - - - - -
34. chrnb2b ENSDARG00000017790 155 0.913 - 0.913 - - - - - - - cholinergic receptor, nicotinic, beta 2b [Source:ZFIN;Acc:ZDB-GENE-070821-3]
35. FP245511.1 FP245511.1 247 0.908 - 0.908 - - - - - - -
36. maf maf 1824 0.905 0.905 - - - - - - - -
37. si:ch211-86h15.1 ENSDARG00000074098 354 0.901 0.901 - - - - - - - - si:ch211-86h15.1 [Source:ZFIN;Acc:ZDB-GENE-081107-38]
38. CR396586.2 CR396586.2 103 0.901 - - - - - - 0.901 - -
39. pou2f3 ENSDARG00000052387 103 0.899 0.899 - - - - - - - - POU class 2 homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-060512-299]
40. FOXO6_1 FOXO6_1 73 0.899 0.899 - - - - - - - -
41. mir130b 180 0.897 0.897 - - - - - - - - microRNA 130b
42. CU302376.1 CU302376.1 141 0.894 - 0.894 - - - - - - -
43. si:ch211-117i10.10 si:ch211-117i10.10 18 0.894 0.894 - - - - - - - -
44. tmem168b ENSDARG00000062168 17 0.894 0.894 - - - - - - - - transmembrane protein 168b [Source:ZFIN;Acc:ZDB-GENE-090406-3]
45. socs3a ENSDARG00000025428 349 0.894 - 0.894 - - - - - - - suppressor of cytokine signaling 3a [Source:ZFIN;Acc:ZDB-GENE-030131-7349]
46. si:dkey-6f10.3 ENSDARG00000093660 116 0.893 0.893 - - - - - - - - si:dkey-6f10.3 [Source:ZFIN;Acc:ZDB-GENE-041210-339]
47. ddx31 ENSDARG00000035507 167 0.893 - 0.893 - - - - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 31 [Source:ZFIN;Acc:ZDB-GENE-030131-3973]
48. robo1 ENSDARG00000026784 125 0.892 - 0.892 - - - - - - - roundabout, axon guidance receptor, homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-000209-3]
49. haus7 ENSDARG00000037432, ENSDARG00000112118 820 0.89 0.890 - - - - - - - - HAUS augmin-like complex, subunit 7 [Source:ZFIN;Acc:ZDB-GENE-050506-15]
50. TRPM4 TRPM4 60 0.889 - 0.889 - - - - - - -
51. nostrin ENSDARG00000077866 85 0.889 0.889 - - - - - - - - nitric oxide synthase trafficking [Source:ZFIN;Acc:ZDB-GENE-070522-2]
52. rpe65c ENSDARG00000054420, ENSDARG00000113640 28 0.889 - 0.889 - - - - - - - retinal pigment epithelium-specific protein 65c [Source:ZFIN;Acc:ZDB-GENE-081104-505]
53. otud3 ENSDARG00000022648 263 0.888 - 0.888 - - - - - - - OTU deubiquitinase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2509]
54. nkx2.3 ENSDARG00000039095, ENSDARG00000113490 493 0.887 0.887 - - - - - - - - NK2 homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-990415-178]
55. zbtb38 ENSDARG00000100607 17 0.885 0.885 - - - - - - - - zinc finger and BTB domain containing 38 [Source:ZFIN;Acc:ZDB-GENE-091204-308]
56. CR391997.1 CR391997.1 62 0.884 - - - - - - 0.884 - -
57. ssna1 ENSDARG00000101300 403 0.884 0.884 - - - - - - - - Sjogren syndrome nuclear autoantigen 1 [Source:ZFIN;Acc:ZDB-GENE-081104-255]
58. CCDC108 CCDC108 74 0.884 0.884 - - - - - - - -
59. PLEKHG3 72 0.884 - - - - - - 0.884 - - pleckstrin homology and RhoGEF domain containing G3, transcript variant X5
60. Metazoa_SRP_25 Metazoa_SRP_25 13 0.884 0.884 - - - - - - - -
61. rock2b ENSDARG00000004877, ENSDARG00000096433 135 0.884 - - - - - - 0.884 - - rho-associated, coiled-coil containing protein kinase 2b [Source:ZFIN;Acc:ZDB-GENE-060125-2]
62. oprl1 ENSDARG00000071209 58 0.884 - - - - - - 0.884 - - opiate receptor-like 1 [Source:ZFIN;Acc:ZDB-GENE-040312-4]
63. NOTUM NOTUM 232 0.883 - 0.883 - - - - - - -
64. C25H12orf29 C25H12orf29 31 0.883 0.883 - - - - - - - -
65. FAM163A ENSDARG00000093021 86 0.883 0.883 - - - - - - - - family with sequence similarity 163 member A [Source:HGNC Symbol;Acc:HGNC:28274]
66. dao.3 ENSDARG00000035601 15 0.882 0.882 - - - - - - - - D-amino-acid oxidase, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1894]
67. SNORD38 SNORD38 171 0.882 0.882 - - - - - - - -
68. AL928712.1 AL928712.1 101 0.882 0.882 - - - - - - - -
69. si:ch211-242f23.8 ENSDARG00000087585 22 0.882 0.882 - - - - - - - - si:ch211-242f23.8 [Source:ZFIN;Acc:ZDB-GENE-091204-11]
70. crybb3 ENSDARG00000041301 48 0.882 0.882 - - - - - - - - crystallin, beta B3 [Source:ZFIN;Acc:ZDB-GENE-060130-2]
71. zgc:173837 ENSDARG00000076949 24 0.882 0.882 - - - - - - - - zgc:173837 [Source:ZFIN;Acc:ZDB-GENE-080213-12]
72. si:ch73-138i16.1 ENSDARG00000095562 8 0.882 0.882 - - - - - - - - si:ch73-138i16.1 [Source:ZFIN;Acc:ZDB-GENE-070705-208]
73. CT573256.1 ENSDARG00000091657 18 0.882 0.882 - - - - - - - - serine/threonine-protein kinase VRK1-like [Source:NCBI gene;Acc:794952]
74. CU929356.4 CU929356.4 86 0.882 0.882 - - - - - - - -
75. igsf5 igsf5 85 0.882 0.882 - - - - - - - -
76. fasn_1 ENSDARG00000087657 31 0.882 0.882 - - - - - - - - fatty acid synthase [Source:ZFIN;Acc:ZDB-GENE-030131-7802]
77. CR381673.1 ENSDARG00000098337 7 0.882 0.882 - - - - - - - -
78. lipt2 ENSDARG00000069852 14 0.882 0.882 - - - - - - - - lipoyl(octanoyl) transferase 2 [Source:ZFIN;Acc:ZDB-GENE-060312-18]
79. ZNF337_17 ZNF337_17 12 0.882 0.882 - - - - - - - -
80. CREB3L3 CREB3L3 24 0.882 0.882 - - - - - - - -
81. emx3 ENSDARG00000020417 85 0.882 0.882 - - - - - - - - empty spiracles homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-990415-53]
82. RAB38 122 0.882 0.882 - - - - - - - - RAB38, member RAS oncogene family
83. lrrc4.2 ENSDARG00000003020 235 0.882 0.882 - - - - - - - - leucine rich repeat containing 4.2 [Source:ZFIN;Acc:ZDB-GENE-030131-7997]
84. sntg2 ENSDARG00000101660 19 0.882 0.882 - - - - - - - - syntrophin, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-060526-196]
85. si:ch211-67f13.7 ENSDARG00000077845 8 0.882 0.882 - - - - - - - - si:ch211-67f13.7 [Source:ZFIN;Acc:ZDB-GENE-090313-126]
86. fam101a 4 0.882 0.882 - - - - - - - - family with sequence similarity 101, member A
87. ZNF648 ENSDARG00000104823 194 0.882 0.882 - - - - - - - - zinc finger protein 648 [Source:ZFIN;Acc:ZDB-GENE-120215-149]
88. PRKCA_1 ENSDARG00000099841 12 0.882 0.882 - - - - - - - - protein kinase C alpha [Source:HGNC Symbol;Acc:HGNC:9393]
89. GPR180 73 0.882 0.882 - - - - - - - - G protein-coupled receptor 180, transcript variant X2
90. si:ch211-76m11.15 ENSDARG00000098979 6 0.882 0.882 - - - - - - - - si:ch211-76m11.15 [Source:ZFIN;Acc:ZDB-GENE-110411-136]
91. SYTL1 ENSDARG00000070094 282 0.882 0.882 - - - - - - - - synaptotagmin-like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-439]
92. FP236789.1 ENSDARG00000105406 57 0.882 0.882 - - - - - - - -
93. cyp2x6 ENSDARG00000079653, ENSDARG00000111425 33 0.882 0.882 - - - - - - - - cytochrome P450, family 2, subfamily X, polypeptide 6 [Source:ZFIN;Acc:ZDB-GENE-050320-144]
94. slc24a4b ENSDARG00000067509 33 0.882 0.882 - - - - - - - - solute carrier family 24 (sodium/potassium/calcium exchanger), member 4b [Source:ZFIN;Acc:ZDB-GENE-081031-75]
95. si:dkey-199f5.6 ENSDARG00000094400 51 0.882 0.882 - - - - - - - - si:dkey-199f5.6 [Source:ZFIN;Acc:ZDB-GENE-100922-107]
96. CR848761.1 CR848761.1 4 0.882 0.882 - - - - - - - -
97. Metazoa_SRP_18 Metazoa_SRP_18 4 0.882 0.882 - - - - - - - -
98. BX908804.1 ENSDARG00000002797 4 0.882 0.882 - - - - - - - -
99. TULP2 TULP2 38 0.882 0.882 - - - - - - - -
100. si:dkey-197d18.1 si:dkey-197d18.1 4 0.882 0.882 - - - - - - - -

There are 899 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA