Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for plod1a

Gene Name Gene ID Reads Annotation
plod1a ENSDARG00000059746 3364 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3165]










Genes with expression patterns similar to plod1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. plod1a ENSDARG00000059746 3364 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3165]
2. lum ENSDARG00000045580 5395 2.538 0.835 - - - 0.943 - - - 0.760 lumican [Source:ZFIN;Acc:ZDB-GENE-040625-24]
3. tgfb3 ENSDARG00000019367 2327 2.41 - - - - - 0.919 0.789 - 0.702 transforming growth factor, beta 3 [Source:ZFIN;Acc:ZDB-GENE-030723-4]
4. Mar-06 Mar-06 953 2.384 0.845 - 0.767 0.772 - - - - -
5. ntla ntla 926 2.374 - - - - - 0.856 0.796 - 0.722
6. ism1 ENSDARG00000020541 1241 2.372 - - - - - 0.795 0.876 - 0.701 isthmin 1 [Source:ZFIN;Acc:ZDB-GENE-050523-3]
7. CABZ01044297.1 CABZ01044297.1 2015 2.329 - - - 0.747 - 0.844 0.738 - -
8. PAQR4 PAQR4 2150 2.304 - - - - - 0.839 0.756 - 0.709
9. mef2aa ENSDARG00000031756 2699 2.157 0.724 - - - - 0.716 0.717 - - myocyte enhancer factor 2aa [Source:ZFIN;Acc:ZDB-GENE-990415-163]
10. spcs2 ENSDARG00000042823 10032 1.958 - 0.995 - - 0.963 - - - - signal peptidase complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-050320-32]
11. larp7 ENSDARG00000017315 1194 1.954 - 0.999 - - 0.955 - - - - La ribonucleoprotein domain family, member 7 [Source:ZFIN;Acc:ZDB-GENE-030131-6896]
12. itpkcb ENSDARG00000067741 2370 1.823 0.824 0.999 - - - - - - - inositol-trisphosphate 3-kinase Cb [Source:ZFIN;Acc:ZDB-GENE-080225-27]
13. pdgfrl ENSDARG00000006456, ENSDARG00000116983 1020 1.803 - 0.999 - - - - 0.804 - - platelet-derived growth factor receptor-like [Source:ZFIN;Acc:ZDB-GENE-040426-901]
14. pip5k1bb ENSDARG00000006508 2812 1.793 - - 0.837 - 0.956 - - - - phosphatidylinositol-4-phosphate 5-kinase, type I, beta b [Source:ZFIN;Acc:ZDB-GENE-040912-141]
15. abhd17b ENSDARG00000035571 745 1.792 - 0.999 - 0.793 - - - - - abhydrolase domain containing 17B [Source:ZFIN;Acc:ZDB-GENE-040718-244]
16. abce1 ENSDARG00000007216 7502 1.789 - 0.963 - - 0.826 - - - - ATP-binding cassette, sub-family E (OABP), member 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1995]
17. dopey1 438 1.784 - - - 0.827 0.957 - - - - dopey family member 1, transcript variant X4
18. hvcn1 ENSDARG00000040338 571 1.735 - - 0.787 - 0.948 - - - - hydrogen voltage-gated channel 1 [Source:ZFIN;Acc:ZDB-GENE-040718-36]
19. tgm2a ENSDARG00000070157 4516 1.73 - 0.998 - - - 0.732 - - - transglutaminase 2, C polypeptide A [Source:ZFIN;Acc:ZDB-GENE-040912-78]
20. tmem189 ENSDARG00000042732 4004 1.696 - 0.995 - - - - - - 0.701 transmembrane protein 189 [Source:ZFIN;Acc:ZDB-GENE-041010-150]
21. clu ENSDARG00000010434 498 1.691 - - - - 0.963 0.728 - - - clusterin [Source:ZFIN;Acc:ZDB-GENE-040426-1774]
22. plcl1 ENSDARG00000067676 2457 1.689 - - - - - 0.863 0.826 - - phospholipase C like 1 [Source:ZFIN;Acc:ZDB-GENE-090313-194]
23. lman1 ENSDARG00000069980 2550 1.682 - 0.974 - - - 0.708 - - - lectin, mannose-binding, 1 [Source:ZFIN;Acc:ZDB-GENE-060201-4]
24. exoc3l4 ENSDARG00000058180 923 1.678 0.720 - - - 0.958 - - - - exocyst complex component 3-like 4 [Source:ZFIN;Acc:ZDB-GENE-081028-71]
25. TUSC5_1 TUSC5_1 320 1.667 - - 0.713 - 0.954 - - - -
26. dcbld2 ENSDARG00000062177, ENSDARG00000112201 3795 1.662 - - - - 0.903 - - - 0.759 discoidin, CUB and LCCL domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1822]
27. rab5b ENSDARG00000016059, ENSDARG00000114966 1252 1.659 0.704 - - - 0.955 - - - - RAB5B, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040426-2593]
28. ddx1 ENSDARG00000032117 1295 1.657 - - - 0.720 0.937 - - - - DEAD (Asp-Glu-Ala-Asp) box helicase 1 [Source:ZFIN;Acc:ZDB-GENE-041001-215]
29. eng1b eng1b 2544 1.65 - - - - 0.949 - 0.701 - -
30. ntd5 ENSDARG00000040944 4988 1.642 - - - - - 0.833 0.809 - - ntl-dependent gene 5 [Source:ZFIN;Acc:ZDB-GENE-031030-7]
31. si:dkey-11c5.11 ENSDARG00000096637 130 1.634 - - 0.815 0.819 - - - - - si:dkey-11c5.11 [Source:ZFIN;Acc:ZDB-GENE-121214-253]
32. gpx7 ENSDARG00000091511 3045 1.63 0.873 - - 0.757 - - - - - glutathione peroxidase 7 [Source:ZFIN;Acc:ZDB-GENE-050522-419]
33. IGSF10 ENSDARG00000077497 317 1.611 - - - - - 0.805 0.806 - - immunoglobulin superfamily, member 10 [Source:ZFIN;Acc:ZDB-GENE-130530-827]
34. foxo1a ENSDARG00000099555 288 1.61 0.781 - - 0.829 - - - - - forkhead box O1 a [Source:ZFIN;Acc:ZDB-GENE-061013-59]
35. SHISA8 SHISA8 58 1.609 - - 0.842 - - - 0.767 - -
36. COBLL1_1 COBLL1_1 787 1.607 - - - 0.785 - 0.822 - - -
37. chad ENSDARG00000045071 903 1.606 - - - - - 0.840 0.766 - - chondroadherin [Source:ZFIN;Acc:ZDB-GENE-040426-1130]
38. eif5b ENSDARG00000016548 3972 1.604 - - - - 0.901 - - - 0.703 eukaryotic translation initiation factor 5B [Source:ZFIN;Acc:ZDB-GENE-050208-20]
39. CABZ01079764.1 CABZ01079764.1 12103 1.604 - - - - - 0.807 0.797 - -
40. si:dkeyp-12a9.5 3058 1.599 - - - - - 0.829 0.770 - - si:dkeyp-12a9.5
41. hhip ENSDARG00000060397, ENSDARG00000111482, ENSDARG00000111668 3025 1.597 - - - - - 0.816 0.781 - - hedgehog interacting protein [Source:ZFIN;Acc:ZDB-GENE-030131-4827]
42. epyc ENSDARG00000056950 7783 1.593 - - - - - 0.834 0.759 - - epiphycan [Source:ZFIN;Acc:ZDB-GENE-041008-9]
43. cyr61 ENSDARG00000023062 1213 1.586 0.864 - - - - - - - 0.722 cysteine-rich, angiogenic inducer, 61 [Source:ZFIN;Acc:ZDB-GENE-040426-3]
44. itgb4 ENSDARG00000028507 2568 1.578 0.820 - - 0.758 - - - - - integrin, beta 4 [Source:ZFIN;Acc:ZDB-GENE-030131-7209]
45. ehd2 ehd2 1089 1.577 - - - - - 0.754 0.823 - -
46. CNOT4_1 CNOT4_1 697 1.567 0.793 - - - - - - - 0.774
47. srxn1 ENSDARG00000079160 265 1.566 - - 0.795 0.771 - - - - - sulfiredoxin 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-091230-2]
48. sncga ENSDARG00000034423, ENSDARG00000112260 5469 1.566 - - - - - 0.771 0.795 - - synuclein, gamma a [Source:ZFIN;Acc:ZDB-GENE-050417-18]
49. fam46bb 601 1.563 - - - - - 0.779 0.784 - - family with sequence similarity 46, member Bb
50. rybpb ENSDARG00000053459 1464 1.555 - - - 0.845 - - - - 0.710 RING1 and YY1 binding protein b [Source:ZFIN;Acc:ZDB-GENE-061103-96]
51. lmo4a ENSDARG00000013853, ENSDARG00000111873, ENSDARG00000113473 2584 1.554 0.785 - - - - - - - 0.769 LIM domain only 4a [Source:ZFIN;Acc:ZDB-GENE-010702-1]
52. gtpbp10 ENSDARG00000040300 533 1.55 0.731 - - 0.819 - - - - - GTP-binding protein 10 (putative) [Source:ZFIN;Acc:ZDB-GENE-040718-153]
53. ehd3 ENSDARG00000007869 3238 1.548 0.776 - - - - - 0.772 - - EH-domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-041014-352]
54. BX470254.1 ENSDARG00000097402 1389 1.546 - - - - - 0.760 0.786 - -
55. yrk ENSDARG00000004378 618 1.543 - - 0.808 - - - - - 0.735 Yes-related kinase [Source:ZFIN;Acc:ZDB-GENE-030131-9517]
56. sox9a ENSDARG00000003293 812 1.543 - - - - - 0.782 0.761 - - SRY (sex determining region Y)-box 9a [Source:ZFIN;Acc:ZDB-GENE-001103-1]
57. tgm2l ENSDARG00000093381 218 1.542 - - 0.720 - - 0.822 - - - transglutaminase 2, like [Source:ZFIN;Acc:ZDB-GENE-050420-97]
58. BX842614.2 BX842614.2 799 1.541 - - - - - 0.789 0.752 - -
59. igfbp5b ENSDARG00000025348 3803 1.539 - - - - - 0.794 0.745 - - insulin-like growth factor binding protein 5b [Source:ZFIN;Acc:ZDB-GENE-040319-2]
60. BX004812.1 ENSDARG00000096968 5467 1.539 - 0.835 - - - - - - 0.704
61. col9a3 ENSDARG00000037845 6564 1.537 - - - - - 0.815 0.722 - - collagen, type IX, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9799]
62. tppp3 ENSDARG00000030463 992 1.535 - - - - - 0.800 0.735 - - tubulin polymerization-promoting protein family member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1909]
63. pi15a ENSDARG00000045378 2361 1.535 - - - - - 0.827 - - 0.708 peptidase inhibitor 15a [Source:ZFIN;Acc:ZDB-GENE-040724-135]
64. scara3 ENSDARG00000008060 169 1.529 - - - - - 0.773 0.756 - - scavenger receptor class A, member 3 [Source:ZFIN;Acc:ZDB-GENE-041014-317]
65. tmem59 ENSDARG00000019033 2692 1.528 - - - - - - - 0.794 0.734 transmembrane protein 59 [Source:ZFIN;Acc:ZDB-GENE-070912-397]
66. srpx ENSDARG00000010318 946 1.523 - - - - - 0.747 0.776 - - sushi-repeat containing protein X-linked [Source:ZFIN;Acc:ZDB-GENE-050327-43]
67. krt18 ENSDARG00000018404, ENSDARG00000109528 43707 1.513 - 0.755 - - - 0.758 - - - keratin 18 [Source:ZFIN;Acc:ZDB-GENE-030411-6]
68. col27a1a 1747 1.506 - - - - - 0.791 0.715 - - collagen, type XXVII, alpha 1a
69. ITFG3 ITFG3 1803 1.502 - - - 0.789 - - 0.713 - -
70. CU972452.1 CU972452.1 1046 1.499 - - - - - 0.773 0.726 - -
71. fkbp7 ENSDARG00000010962 2986 1.491 0.732 - - - - - 0.759 - - FK506 binding protein 7 [Source:ZFIN;Acc:ZDB-GENE-030616-182]
72. nrp2a_1 ENSDARG00000096546 3358 1.491 - - 0.750 - - - - - 0.741 neuropilin 2a [Source:ZFIN;Acc:ZDB-GENE-040611-2]
73. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 1.488 - - - - - 0.753 - - 0.735 ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
74. degs2 ENSDARG00000042544 1912 1.483 0.701 - - - - - - - 0.782 delta(4)-desaturase, sphingolipid 2 [Source:ZFIN;Acc:ZDB-GENE-080228-1]
75. loxl5b ENSDARG00000076904 468 1.483 - - - - - 0.710 0.773 - - lysyl oxidase-like 5b [Source:ZFIN;Acc:ZDB-GENE-070818-3]
76. tspan7b ENSDARG00000008407 5740 1.482 - - - - - 0.729 0.753 - - tetraspanin 7b [Source:ZFIN;Acc:ZDB-GENE-040927-5]
77. JMJD1C_1 JMJD1C_1 3094 1.48 0.768 - - - - - - - 0.712
78. SGPP1 ENSDARG00000060534 1802 1.477 0.748 - - - - - - - 0.729 sphingosine-1-phosphate phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-090319-2]
79. twist3 ENSDARG00000019646 1221 1.475 - - - 0.708 - - - - 0.767 twist3 [Source:ZFIN;Acc:ZDB-GENE-000210-7]
80. mkxa ENSDARG00000075450, ENSDARG00000114299 233 1.472 - - - - - 0.712 0.760 - - mohawk homeobox a [Source:ZFIN;Acc:ZDB-GENE-080513-1]
81. si:dkeyp-118a3.2 ENSDARG00000086957 2106 1.468 - - - - - 0.722 0.746 - - si:dkeyp-118a3.2 [Source:ZFIN;Acc:ZDB-GENE-060810-149]
82. larp6 1695 1.465 0.752 - - - - - - - 0.713 La ribonucleoprotein domain family, member 6
83. ERBB4_1 ERBB4_1 1064 1.463 - - - - - 0.763 - - 0.700
84. tnnc1b ENSDARG00000037539 13945 1.462 - - - - - 0.706 0.756 - - troponin C type 1b (slow) [Source:ZFIN;Acc:ZDB-GENE-040625-62]
85. lims2 ENSDARG00000014976 1248 1.455 - - - - - 0.702 0.753 - - LIM and senescent cell antigen-like domains 2 [Source:ZFIN;Acc:ZDB-GENE-050522-56]
86. CR392006.1 CR392006.1 1401 1.454 - - - - - 0.741 0.713 - -
87. cbsb ENSDARG00000010946 5779 1.45 - - - - - 0.703 - - 0.747 cystathionine-beta-synthase b [Source:ZFIN;Acc:ZDB-GENE-021030-3]
88. pitx3 ENSDARG00000070069 363 1.45 - - - - - 0.720 0.730 - - paired-like homeodomain 3 [Source:ZFIN;Acc:ZDB-GENE-041229-4]
89. ablim2 ENSDARG00000055223 1934 1.45 - - - 0.737 - 0.713 - - - actin binding LIM protein family, member 2 [Source:ZFIN;Acc:ZDB-GENE-100316-5]
90. gnb2l1 61553 1.441 - 0.713 - - 0.728 - - - - guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1
91. ATP5J_2 ATP5J_2 2381 1.434 - - - - - 0.722 0.712 - -
92. fh ENSDARG00000075132 1340 1.426 - - - - - - 0.705 - 0.721 fumarate hydratase [Source:ZFIN;Acc:ZDB-GENE-010724-6]
93. ADAMTS17 ENSDARG00000075555 887 0.999 - 0.999 - - - - - - - ADAM metallopeptidase with thrombospondin type 1 motif, 17 [Source:ZFIN;Acc:ZDB-GENE-121030-7]
94. hoxc13a ENSDARG00000070353 4815 0.999 - 0.999 - - - - - - - homeobox C13a [Source:ZFIN;Acc:ZDB-GENE-000822-4]
95. rtn3 ENSDARG00000091348 2070 0.999 - 0.999 - - - - - - - reticulon 3 [Source:ZFIN;Acc:ZDB-GENE-030710-5]
96. zcchc14 ENSDARG00000101242 630 0.999 - 0.999 - - - - - - - zinc finger, CCHC domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-060503-319]
97. tyms ENSDARG00000042894 3068 0.999 - 0.999 - - - - - - - thymidylate synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-59]
98. si:dkeyp-44a8.2 ENSDARG00000092493 8308 0.999 - 0.999 - - - - - - - si:dkeyp-44a8.2 [Source:ZFIN;Acc:ZDB-GENE-070705-542]
99. slc25a36b ENSDARG00000015915 1750 0.999 - 0.999 - - - - - - - solute carrier family 25 (pyrimidine nucleotide carrier ), member 36b [Source:ZFIN;Acc:ZDB-GENE-080219-28]
100. BX005368.2 BX005368.2 702 0.999 - 0.999 - - - - - - -

There are 1375 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA