Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for pld3

Gene Name Gene ID Reads Annotation
pld3 ENSDARG00000068199 205 phospholipase D family, member 3 [Source:ZFIN;Acc:ZDB-GENE-050419-212]










Genes with expression patterns similar to pld3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pld3 ENSDARG00000068199 205 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 phospholipase D family, member 3 [Source:ZFIN;Acc:ZDB-GENE-050419-212]
2. mppe1 ENSDARG00000045416 340 2.251 - 0.718 - - - 0.817 0.716 - - metallophosphoesterase 1 [Source:ZFIN;Acc:ZDB-GENE-050417-195]
3. syt13 ENSDARG00000012306 298 1.812 - 0.867 - - - 0.945 - - - synaptotagmin XIII [Source:ZFIN;Acc:ZDB-GENE-050417-135]
4. olfm1a ENSDARG00000018270 107 1.805 - - - - - 0.909 0.896 - - olfactomedin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-194]
5. sdr42e1 ENSDARG00000098838 25 1.801 - 0.833 - - - 0.968 - - - short chain dehydrogenase/reductase family 42E, member 1 [Source:ZFIN;Acc:ZDB-GENE-051120-63]
6. CT030712.1 ENSDARG00000044355 83 1.777 - 0.821 - - - 0.956 - - - uncharacterized LOC100534830 [Source:NCBI gene;Acc:100534830]
7. kctd1 ENSDARG00000074056 652 1.774 - 0.812 - - - 0.962 - - - potassium channel tetramerization domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040724-194]
8. b2m ENSDARG00000053136 215 1.774 - - 0.869 - - 0.905 - - - beta-2-microglobulin [Source:ZFIN;Acc:ZDB-GENE-980526-88]
9. trhr2 ENSDARG00000093901, ENSDARG00000114177 67 1.76 - - 0.890 - - 0.870 - - - thyrotropin releasing hormone receptor 2 [Source:ZFIN;Acc:ZDB-GENE-050419-193]
10. si:dkey-231k6.4 si:dkey-231k6.4 72 1.759 - - 0.842 - - 0.917 - - -
11. smpd5 ENSDARG00000059811, ENSDARG00000117140 60 1.737 - 0.769 - - - 0.968 - - - sphingomyelin phosphodiesterase 5 [Source:ZFIN;Acc:ZDB-GENE-061110-22]
12. nfyba ENSDARG00000039185 1804 1.733 - - - - - 0.858 0.875 - - nuclear transcription factor Y, beta a [Source:ZFIN;Acc:ZDB-GENE-050417-13]
13. ENSDARG00000086878 ENSDARG00000086878 332 1.73 - - - - - 0.947 0.783 - -
14. SLC36A4 ENSDARG00000039661 175 1.729 - - 0.786 - - 0.943 - - - solute carrier family 36 (proton/amino acid symporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-050309-239]
15. tapbp tapbp 70 1.725 - - 0.799 - - 0.926 - - -
16. plat ENSDARG00000062707 491 1.723 - - - - - 0.966 0.757 - - plasminogen activator, tissue [Source:ZFIN;Acc:ZDB-GENE-081104-181]
17. CCDC142 ENSDARG00000101377 161 1.722 - - - - - 0.939 0.783 - - coiled-coil domain containing 142 [Source:ZFIN;Acc:ZDB-GENE-030131-6705]
18. gtf3c3 ENSDARG00000043247 202 1.72 - 0.889 - - - 0.831 - - - general transcription factor IIIC, polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-040914-80]
19. CU013533.1 CU013533.1 108 1.704 - 0.802 - - - 0.902 - - -
20. ZNF337_18 ZNF337_18 152 1.703 - - 0.784 - - 0.919 - - -
21. gabpb2a ENSDARG00000007943 1570 1.698 - - - - - 0.952 0.746 - - GA binding protein transcription factor subunit beta 2a [Source:ZFIN;Acc:ZDB-GENE-030131-5733]
22. C8H1orf194 C8H1orf194 111 1.695 - 0.744 - - - 0.951 - - -
23. samd1b ENSDARG00000079062 280 1.689 - - 0.833 - - 0.856 - - - sterile alpha motif domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-090313-2]
24. arl16 ENSDARG00000059498, ENSDARG00000110386 229 1.685 - - 0.732 - - 0.953 - - - ADP-ribosylation factor-like 16 [Source:ZFIN;Acc:ZDB-GENE-070410-114]
25. SNORA57 SNORA57 148 1.683 - 0.715 - - - 0.968 - - -
26. FAM163A ENSDARG00000093021 86 1.681 - - 0.865 - - 0.816 - - - family with sequence similarity 163 member A [Source:HGNC Symbol;Acc:HGNC:28274]
27. nfatc3b ENSDARG00000051729 239 1.68 - - - - - 0.955 0.725 - - nuclear factor of activated T cells 3b [Source:ZFIN;Acc:ZDB-GENE-100922-25]
28. dpp6b ENSDARG00000024744 234 1.676 - 0.780 - - - 0.896 - - - dipeptidyl-peptidase 6b [Source:ZFIN;Acc:ZDB-GENE-070705-88]
29. si:ch1073-280h16.1 si:ch1073-280h16.1 229 1.673 - - - - - 0.821 0.852 - -
30. rad54b ENSDARG00000092134 231 1.659 - 0.761 - - - 0.898 - - - RAD54 homolog B [Source:ZFIN;Acc:ZDB-GENE-060810-50]
31. ablim1a ENSDARG00000060149 228 1.648 - - - - - 0.915 0.733 - - actin binding LIM protein 1a [Source:ZFIN;Acc:ZDB-GENE-080219-41]
32. fam110b ENSDARG00000088073 420 1.63 - 0.889 - - - 0.741 - - - family with sequence similarity 110, member B [Source:ZFIN;Acc:ZDB-GENE-050626-70]
33. pknox2 ENSDARG00000055349 784 1.626 - - 0.733 - - 0.893 - - - pbx/knotted 1 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-031118-112]
34. si:ch1073-357b18.4 ENSDARG00000096602 121 1.612 - - - - - 0.898 0.714 - - si:ch1073-357b18.4 [Source:ZFIN;Acc:ZDB-GENE-121214-213]
35. KDM4C ENSDARG00000061504, ENSDARG00000111347, ENSDARG00000114179 383 1.607 - - - - - 0.867 0.740 - - lysine (K)-specific demethylase 4C [Source:ZFIN;Acc:ZDB-GENE-070209-38]
36. orai2 ENSDARG00000035148 330 1.606 - - 0.787 - - 0.819 - - - ORAI calcium release-activated calcium modulator 2 [Source:ZFIN;Acc:ZDB-GENE-060531-127]
37. vegfaa ENSDARG00000103542 436 1.602 - 0.842 - - - - 0.760 - - vascular endothelial growth factor Aa [Source:ZFIN;Acc:ZDB-GENE-990415-273]
38. prdm2b ENSDARG00000076451 97 1.598 - 0.720 0.878 - - - - - - PR domain containing 2, with ZNF domain b [Source:ZFIN;Acc:ZDB-GENE-080613-3]
39. pparaa ENSDARG00000031777 216 1.591 0.760 0.831 - - - - - - - peroxisome proliferator-activated receptor alpha a [Source:ZFIN;Acc:ZDB-GENE-041210-169]
40. grasp ENSDARG00000000588, ENSDARG00000113330 766 1.588 - 0.706 - - - 0.882 - - - GRP1 (general receptor for phosphoinositides 1)-associated scaffold protein [Source:ZFIN;Acc:ZDB-GENE-060312-30]
41. CELF6 ENSDARG00000101933 228 1.562 - - - - - 0.851 0.711 - - CUGBP Elav-like family member 6 [Source:HGNC Symbol;Acc:HGNC:14059]
42. me1 ENSDARG00000053215 107 1.559 - - 0.731 - - 0.828 - - - malic enzyme 1, NADP(+)-dependent, cytosolic [Source:ZFIN;Acc:ZDB-GENE-061013-438]
43. coq4 ENSDARG00000104733 402 1.55 - 0.718 - - - 0.832 - - - coenzyme Q4 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060526-218]
44. hcfc1b ENSDARG00000012519 3633 1.55 - - - - - 0.825 0.725 - - host cell factor C1b [Source:ZFIN;Acc:ZDB-GENE-030131-2411]
45. cplx4c ENSDARG00000094889 253 1.536 - - - - 0.702 0.834 - - - complexin 4c [Source:ZFIN;Acc:ZDB-GENE-101018-1]
46. ankrd10b ENSDARG00000004771 654 1.531 - - - - - 0.736 0.795 - - ankyrin repeat domain 10b [Source:ZFIN;Acc:ZDB-GENE-061013-49]
47. C19H1orf51 C19H1orf51 1776 1.522 - - - - 0.773 - 0.749 - -
48. HIVEP2 HIVEP2 87 1.519 - - - - - 0.798 0.721 - -
49. tapt1b ENSDARG00000061143, ENSDARG00000109798, ENSDARG00000112241 482 1.512 - - - - 0.716 - 0.796 - - transmembrane anterior posterior transformation 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4025]
50. si:ch211-243j20.2 ENSDARG00000033916 347 1.506 - - - - - 0.761 0.745 - - si:ch211-243j20.2 [Source:ZFIN;Acc:ZDB-GENE-041014-345]
51. SLC35G1 ENSDARG00000063268 91 1.501 - 0.746 - - - - 0.755 - - solute carrier family 35 member G1 [Source:HGNC Symbol;Acc:HGNC:26607]
52. polr1b ENSDARG00000077469, ENSDARG00000115880 313 1.495 - - 0.701 - - - 0.794 - - RNA polymerase I subunit B [Source:ZFIN;Acc:ZDB-GENE-040426-1598]
53. arntl1b ENSDARG00000035732, ENSDARG00000114562 349 1.486 - 0.775 0.711 - - - - - - aryl hydrocarbon receptor nuclear translocator-like 1b [Source:ZFIN;Acc:ZDB-GENE-030408-1]
54. cxadr ENSDARG00000043658, ENSDARG00000110210, ENSDARG00000111984 451 1.485 - - 0.759 - - 0.726 - - - CXADR, Ig-like cell adhesion molecule [Source:ZFIN;Acc:ZDB-GENE-020814-2]
55. poglut1 ENSDARG00000053463 738 1.479 - 0.727 - - - 0.752 - - - protein O-glucosyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-051120-24]
56. CACFD1 ENSDARG00000090818 1298 1.47 - - - - - 0.756 0.714 - - calcium channel flower domain containing 1 [Source:HGNC Symbol;Acc:HGNC:1365]
57. TTC37 ENSDARG00000074314 356 1.467 - 0.719 - - - 0.748 - - - tetratricopeptide repeat domain 37 [Source:ZFIN;Acc:ZDB-GENE-110125-2]
58. plekhg7 ENSDARG00000062855 308 1.465 - - - - 0.710 - 0.755 - - pleckstrin homology domain containing, family G (with RhoGef domain) member 7 [Source:ZFIN;Acc:ZDB-GENE-070410-15]
59. abi2b ENSDARG00000014875 2259 1.448 - - 0.723 - - - 0.725 - - abl-interactor 2b [Source:ZFIN;Acc:ZDB-GENE-060519-5]
60. si:dkey-258f14.2 ENSDARG00000094874 297 1.442 0.720 0.722 - - - - - - - si:dkey-258f14.2 [Source:ZFIN;Acc:ZDB-GENE-081104-395]
61. serpine3 ENSDARG00000057108 49 1.43 0.706 0.724 - - - - - - - serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3 [Source:ZFIN;Acc:ZDB-GENE-050309-223]
62. kcng1 ENSDARG00000099038 23 0.978 - - - - - 0.978 - - - potassium voltage-gated channel, subfamily G, member 1 [Source:ZFIN;Acc:ZDB-GENE-080220-5]
63. msxe msxe 362 0.978 - - - - - 0.978 - - -
64. si:rp71-36a1.1 ENSDARG00000095295 13 0.975 - - - - - 0.975 - - - si:rp71-36a1.1 [Source:ZFIN;Acc:ZDB-GENE-050208-407]
65. PKN1 PKN1 42 0.975 - - - - - 0.975 - - -
66. CU463790.1 CU463790.1 60 0.973 - - - - - 0.973 - - -
67. synm ENSDARG00000062350, ENSDARG00000113948, ENSDARG00000114029 483 0.972 - - - - - 0.972 - - - synemin, intermediate filament protein [Source:ZFIN;Acc:ZDB-GENE-050419-81]
68. fignl1 ENSDARG00000016427 636 0.97 - - - - - 0.970 - - - fidgetin-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1862]
69. BX323449.2 BX323449.2 50 0.97 - - - - - 0.970 - - -
70. hspbp1 ENSDARG00000102937 260 0.969 - - - - - 0.969 - - - HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1 [Source:ZFIN;Acc:ZDB-GENE-030219-55]
71. rgs9b ENSDARG00000045156, ENSDARG00000111650 77 0.969 - - - - - 0.969 - - - regulator of G protein signaling 9b [Source:ZFIN;Acc:ZDB-GENE-040426-1708]
72. si:dkey-163m14.10 si:dkey-163m14.10 33 0.969 - - - - - 0.969 - - -
73. irgf1 ENSDARG00000070774 7 0.968 - - - - - 0.968 - - - immunity-related GTPase family, f1 [Source:ZFIN;Acc:ZDB-GENE-051212-5]
74. retsatl ENSDARG00000034989 41 0.968 - - - - - 0.968 - - - retinol saturase (all-trans-retinol 13,14-reductase) like [Source:ZFIN;Acc:ZDB-GENE-051113-252]
75. zgc:73349 zgc:73349 4 0.968 - - - - - 0.968 - - -
76. zgc:193807 ENSDARG00000076652, ENSDARG00000105440 34 0.968 - - - - - 0.968 - - - zgc:193807 [Source:ZFIN;Acc:ZDB-GENE-081022-42]
77. CABZ01079192.1 ENSDARG00000101629 23 0.968 - - - - - 0.968 - - - sucrase-isomaltase (alpha-glucosidase) [Source:NCBI gene;Acc:100148922]
78. U1_55 U1_55 4 0.968 - - - - - 0.968 - - -
79. pdk2 pdk2 32 0.968 - - - - - 0.968 - - -
80. AVL9 ENSDARG00000055538 329 0.968 - - - - - 0.968 - - - AVL9 homolog (S. cerevisiase) [Source:ZFIN;Acc:ZDB-GENE-060825-261]
81. ftr03 8 0.968 - - - - - 0.968 - - - finTRIM family, member 3
82. si:dkey-192k22.2 ENSDARG00000095111 4 0.968 - - - - - 0.968 - - - si:dkey-192k22.2 [Source:ZFIN;Acc:ZDB-GENE-090313-219]
83. slc35a5 ENSDARG00000000001 17 0.968 - - - - - 0.968 - - - solute carrier family 35, member A5 [Source:ZFIN;Acc:ZDB-GENE-030616-55]
84. PFKFB1 ENSDARG00000037140 5 0.968 - - - - - 0.968 - - - 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5664]
85. scpp5 ENSDARG00000078622 15 0.968 - - - - - 0.968 - - - secretory calcium-binding phosphoprotein 5 [Source:ZFIN;Acc:ZDB-GENE-090313-256]
86. ppm1f ENSDARG00000005786, ENSDARG00000109839 25 0.968 - - - - - 0.968 - - - protein phosphatase, Mg2+/Mn2+ dependent, 1F [Source:ZFIN;Acc:ZDB-GENE-051128-2]
87. pcdh2g6 9 0.968 - - - - - 0.968 - - - protocadherin 2 gamma 6
88. si:ch211-213a13.2 ENSDARG00000074546, ENSDARG00000093024 5 0.968 - - - - - 0.968 - - - si:ch211-213a13.2 [Source:ZFIN;Acc:ZDB-GENE-050208-551]
89. AL953879.1 AL953879.1 5 0.968 - - - - - 0.968 - - -
90. CABZ01062083.1 CABZ01062083.1 40 0.968 - - - - - 0.968 - - -
91. PLCXD2 ENSDARG00000058200 8 0.968 - - - - - 0.968 - - - phosphatidylinositol-specific phospholipase C, X domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-091204-217]
92. pglyrp5 ENSDARG00000068382, ENSDARG00000112609 120 0.968 - - - - - 0.968 - - - peptidoglycan recognition protein 5 [Source:ZFIN;Acc:ZDB-GENE-050419-71]
93. CU062667.1 CU062667.1 4 0.968 - - - - - 0.968 - - -
94. ATXN1L ENSDARG00000086977 4 0.968 - - - - - 0.968 - - - ataxin 1-like [Source:ZFIN;Acc:ZDB-GENE-090908-1]
95. zgc:154142 ENSDARG00000100792 42 0.968 - - - - - 0.968 - - - zgc:154142 [Source:ZFIN;Acc:ZDB-GENE-070615-2]
96. ADORA1 ADORA1 8 0.967 - - - - - 0.967 - - -
97. RAC1_2 RAC1_2 51 0.967 - - - - - 0.967 - - -
98. slc30a10 ENSDARG00000103983 46 0.967 - - - - - 0.967 - - - solute carrier family 30, member 10 [Source:ZFIN;Acc:ZDB-GENE-060608-2]
99. si:dkey-22o22.2 ENSDARG00000102445 149 0.967 - - - - - 0.967 - - - si:dkey-22o22.2 [Source:ZFIN;Acc:ZDB-GENE-100922-84]
100. PARM1 ENSDARG00000114063 58 0.967 - - - - - 0.967 - - - prostate androgen-regulated mucin-like protein 1 [Source:ZFIN;Acc:ZDB-GENE-140106-262]

There are 1524 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA