Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for pkp2

Gene Name Gene ID Reads Annotation
pkp2 ENSDARG00000023026 120 plakophilin 2 [Source:ZFIN;Acc:ZDB-GENE-041210-167]










Genes with expression patterns similar to pkp2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pkp2 ENSDARG00000023026 120 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 plakophilin 2 [Source:ZFIN;Acc:ZDB-GENE-041210-167]
2. C11H1orf106 C11H1orf106 263 2.311 - 0.872 - - - 0.728 0.711 - -
3. BX469922.1 BX469922.1 133 2.254 0.779 0.743 - - - 0.732 - - -
4. si:dkey-18j14.4 si:dkey-18j14.4 60 1.72 0.791 0.929 - - - - - - -
5. wu:fb63c12 26 1.696 - - - - - 0.878 0.818 - - wu:fb63c12
6. fam178a fam178a 29 1.683 - 0.808 - - - 0.875 - - -
7. ttc33 ENSDARG00000035406, ENSDARG00000111770 82 1.657 - - - - - 0.902 0.755 - - tetratricopeptide repeat domain 33 [Source:ZFIN;Acc:ZDB-GENE-040718-480]
8. lysmd3 ENSDARG00000024693 754 1.651 - 0.790 - - - - 0.861 - - LysM, putative peptidoglycan-binding, domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040625-88]
9. si:dkeyp-72e1.6 ENSDARG00000099877 126 1.648 0.787 - - - - 0.861 - - - si:dkeyp-72e1.6 [Source:ZFIN;Acc:ZDB-GENE-120215-228]
10. stpg1 ENSDARG00000103765 19 1.627 - 0.808 - - - 0.819 - - - sperm-tail PG-rich repeat containing 1 [Source:ZFIN;Acc:ZDB-GENE-070705-373]
11. GPR141_1 GPR141_1 33 1.618 0.778 - - - - 0.840 - - -
12. C8H1orf222 C8H1orf222 36 1.613 - 0.819 - - - 0.794 - - -
13. st6galnac1.2 ENSDARG00000043816 51 1.6 - 0.725 - - - 0.875 - - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-041014-161]
14. si:ch211-161h7.8 ENSDARG00000089919 60 1.574 0.800 - - - - - 0.774 - - si:ch211-161h7.8 [Source:ZFIN;Acc:ZDB-GENE-091204-302]
15. arf3b ENSDARG00000036998, ENSDARG00000112366 38 1.573 0.775 0.798 - - - - - - - ADP-ribosylation factor 3b [Source:ZFIN;Acc:ZDB-GENE-030616-356]
16. zgc:63972 ENSDARG00000054288, ENSDARG00000112978 78 1.564 - 0.790 - - - - 0.774 - - zgc:63972 [Source:ZFIN;Acc:ZDB-GENE-040426-1320]
17. cryba2a ENSDARG00000030349 1342 1.562 - 0.808 - - - - 0.754 - - crystallin, beta A2a [Source:ZFIN;Acc:ZDB-GENE-040625-8]
18. map3k10 ENSDARG00000055672 284 1.558 0.750 0.808 - - - - - - - mitogen-activated protein kinase kinase kinase 10 [Source:ZFIN;Acc:ZDB-GENE-050419-112]
19. olah ENSDARG00000058502 100 1.558 - 0.808 - - - 0.750 - - - oleoyl-ACP hydrolase [Source:ZFIN;Acc:ZDB-GENE-060312-17]
20. zgc:158417 ENSDARG00000101671 46 1.554 - - - - - 0.760 0.794 - - zgc:158417 [Source:ZFIN;Acc:ZDB-GENE-061201-36]
21. CR631122.1 ENSDARG00000044534 8 1.554 0.800 - - - - - 0.754 - - protein RD3-like [Source:NCBI gene;Acc:100149591]
22. CCNJ ENSDARG00000059917 115 1.546 0.812 - - - - - 0.734 - - cyclin J [Source:ZFIN;Acc:ZDB-GENE-100721-4]
23. mul1b ENSDARG00000052527 431 1.538 - - - - - 0.765 0.773 - - mitochondrial E3 ubiquitin protein ligase 1b [Source:ZFIN;Acc:ZDB-GENE-050208-236]
24. fam86a fam86a 174 1.536 - 0.808 - - - - 0.728 - -
25. CR848664.3 CR848664.3 183 1.514 - 0.793 - - - 0.721 - - -
26. mgme1 ENSDARG00000016656 173 1.51 - 0.761 - - - 0.749 - - - mitochondrial genome maintenance exonuclease 1 [Source:ZFIN;Acc:ZDB-GENE-041212-68]
27. edem2 ENSDARG00000028448 236 1.505 - - - - 0.773 - 0.732 - - ER degradation enhancer, mannosidase alpha-like 2 [Source:ZFIN;Acc:ZDB-GENE-060519-1]
28. hoxc13a ENSDARG00000070353 4815 1.488 - - - - 0.711 - 0.777 - - homeobox C13a [Source:ZFIN;Acc:ZDB-GENE-000822-4]
29. si:dkey-3d18.4 si:dkey-3d18.4 43 1.481 0.703 - - - - - 0.778 - -
30. hdac6 ENSDARG00000008384 144 1.479 0.727 - - - - - 0.752 - - histone deacetylase 6 [Source:ZFIN;Acc:ZDB-GENE-030131-3232]
31. SPEF1 ENSDARG00000022007 44 1.467 - - - - - 0.729 0.738 - - sperm flagellar 1 [Source:HGNC Symbol;Acc:HGNC:15874]
32. PARP14 PARP14 164 1.456 0.749 - - - - 0.707 - - -
33. DSN1 ENSDARG00000089922 269 1.454 0.731 0.723 - - - - - - - DSN1 homolog, MIS12 kinetochore complex component [Source:ZFIN;Acc:ZDB-GENE-170110-2]
34. CU234171.2 CU234171.2 86 1.444 0.726 0.718 - - - - - - -
35. slc9a3.1 ENSDARG00000058498 46 1.444 0.726 - - - - 0.718 - - - solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-060503-545]
36. agps ENSDARG00000042821 203 0.962 - - - - - 0.962 - - - alkylglycerone phosphate synthase [Source:ZFIN;Acc:ZDB-GENE-031118-14]
37. CAPN1 ENSDARG00000055338 683 0.949 - 0.949 - - - - - - - calpain 1 [Source:HGNC Symbol;Acc:HGNC:1476]
38. zgc:103759 ENSDARG00000019503 58 0.934 - - - - - 0.934 - - - zgc:103759 [Source:ZFIN;Acc:ZDB-GENE-041010-100]
39. aspg ENSDARG00000052942 1406 0.928 - - - - - 0.928 - - - asparaginase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-070820-14]
40. si:dkey-71b5.6 ENSDARG00000098861 12 0.928 - - - - - 0.928 - - - si:dkey-71b5.6 [Source:NCBI gene;Acc:100294632]
41. ebpl ENSDARG00000036636 79 0.926 - - - - - 0.926 - - - EBP like [Source:ZFIN;Acc:ZDB-GENE-030616-542]
42. ccdc174 ENSDARG00000023858 432 0.917 - - - - - - 0.917 - - coiled-coil domain containing 174 [Source:ZFIN;Acc:ZDB-GENE-050320-54]
43. RIBC2 ENSDARG00000075177 445 0.909 - 0.909 - - - - - - - RIB43A domain with coiled-coils 2 [Source:ZFIN;Acc:ZDB-GENE-050411-27]
44. zgc:92594 ENSDARG00000089517 83 0.906 - - - - - 0.906 - - - zgc:92594 [Source:ZFIN;Acc:ZDB-GENE-040718-482]
45. otud3 ENSDARG00000022648 263 0.905 - 0.905 - - - - - - - OTU deubiquitinase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2509]
46. gbp3 ENSDARG00000003244 90 0.903 - - - - - 0.903 - - - guanylate binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-070912-176]
47. acer1 ENSDARG00000010347 101 0.901 - - - - - 0.901 - - - alkaline ceramidase 1 [Source:ZFIN;Acc:ZDB-GENE-050417-70]
48. ttll9 ENSDARG00000062806 89 0.901 - - - - - - 0.901 - - tubulin tyrosine ligase-like family, member 9 [Source:ZFIN;Acc:ZDB-GENE-030131-1582]
49. gpr55a ENSDARG00000043447 12 0.898 - - - - - 0.898 - - - G protein-coupled receptor 55a [Source:ZFIN;Acc:ZDB-GENE-051113-260]
50. syt1a ENSDARG00000030614 542 0.895 - 0.895 - - - - - - - synaptotagmin Ia [Source:ZFIN;Acc:ZDB-GENE-040718-165]
51. KCNK3 KCNK3 115 0.895 - 0.895 - - - - - - -
52. fmnl2a ENSDARG00000012586 136 0.893 - 0.893 - - - - - - - formin-like 2a [Source:ZFIN;Acc:ZDB-GENE-081105-70]
53. nrgna ENSDARG00000039626 50 0.891 - - - - - 0.891 - - - neurogranin (protein kinase C substrate, RC3) a [Source:ZFIN;Acc:ZDB-GENE-090710-4]
54. si:dkey-15h8.14 si:dkey-15h8.14 139 0.887 - - - - - 0.887 - - -
55. pdk3a ENSDARG00000014527 15 0.886 - 0.886 - - - - - - - pyruvate dehydrogenase kinase, isozyme 3a [Source:ZFIN;Acc:ZDB-GENE-061220-3]
56. si:dkey-191j3.3 si:dkey-191j3.3 1987 0.885 - - - - - 0.885 - - -
57. PBLD ENSDARG00000016704, ENSDARG00000111119, ENSDARG00000111431 30 0.884 - - - - - 0.884 - - - phenazine biosynthesis like protein domain containing [Source:ZFIN;Acc:ZDB-GENE-050522-217]
58. vps33b ENSDARG00000044813 177 0.884 - - - - - 0.884 - - - vacuolar protein sorting 33B [Source:ZFIN;Acc:ZDB-GENE-050327-73]
59. CABZ01054394.3 CABZ01054394.3 60 0.882 - - - - - 0.882 - - -
60. tmem200a ENSDARG00000031540 52 0.882 0.882 - - - - - - - - transmembrane protein 200A [Source:ZFIN;Acc:ZDB-GENE-040724-81]
61. si:dkey-50i6.5 ENSDARG00000101320 95 0.882 - 0.882 - - - - - - - si:dkey-50i6.5 [Source:ZFIN;Acc:ZDB-GENE-081031-53]
62. si:ch73-346m18.6 si:ch73-346m18.6 40 0.882 - - - - - 0.882 - - -
63. TPPP2 ENSDARG00000035338, ENSDARG00000113727 298 0.882 - 0.882 - - - - - - - tubulin polymerization-promoting protein family member 2 [Source:ZFIN;Acc:ZDB-GENE-140106-24]
64. C22H19orf10_1 C22H19orf10_1 30 0.882 - 0.882 - - - - - - -
65. bmp3 ENSDARG00000060526, ENSDARG00000109238 54 0.881 - 0.881 - - - - - - - bone morphogenetic protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7192]
66. tmem51b ENSDARG00000061916 291 0.88 - - - - - - 0.880 - - transmembrane protein 51b [Source:ZFIN;Acc:ZDB-GENE-030131-5373]
67. ppp6r2b ENSDARG00000069654 323 0.88 - 0.880 - - - - - - - protein phosphatase 6, regulatory subunit 2b [Source:ZFIN;Acc:ZDB-GENE-070705-441]
68. rpe65c ENSDARG00000054420, ENSDARG00000113640 28 0.879 - 0.879 - - - - - - - retinal pigment epithelium-specific protein 65c [Source:ZFIN;Acc:ZDB-GENE-081104-505]
69. TRPM4 TRPM4 60 0.879 - 0.879 - - - - - - -
70. MYO5B ENSDARG00000062003 2 0.878 - - - - - 0.878 - - - myosin VB [Source:ZFIN;Acc:ZDB-GENE-031219-7]
71. si:dkey-23a23.2 ENSDARG00000023036 123 0.878 - - - - - 0.878 - - - si:dkey-23a23.2 [Source:ZFIN;Acc:ZDB-GENE-060503-158]
72. si:ch211-285d14.4 si:ch211-285d14.4 1 0.878 - - - - - 0.878 - - -
73. zgc:112285 ENSDARG00000053323 17 0.878 - - - - - 0.878 - - - zgc:112285 [Source:ZFIN;Acc:ZDB-GENE-050913-132]
74. rltgr ENSDARG00000096533 33 0.878 - - - - - 0.878 - - - RAMP-like triterpene glycoside receptor [Source:ZFIN;Acc:ZDB-GENE-100727-4]
75. grk7b ENSDARG00000055534 17 0.877 - - - - - 0.877 - - - G protein-coupled receptor kinase 7b [Source:ZFIN;Acc:ZDB-GENE-030904-3]
76. crygn1 ENSDARG00000102129 23 0.876 - - - - - 0.876 - - - crystallin, gamma N1 [Source:ZFIN;Acc:ZDB-GENE-050225-1]
77. CABZ01053483.1 CABZ01053483.1 5 0.875 - - - - - 0.875 - - -
78. si:dkey-182i3.9 ENSDARG00000096575 56 0.875 - - - - - 0.875 - - - si:dkey-182i3.9 [Source:ZFIN;Acc:ZDB-GENE-121214-310]
79. SYCP2L 3 0.875 - - - - - 0.875 - - - synaptonemal complex protein 2-like, transcript variant X3
80. PRSS21 PRSS21 2 0.875 - - - - - 0.875 - - -
81. si:ch211-67e16.10 si:ch211-67e16.10 2 0.875 - - - - - 0.875 - - -
82. TNIP2 ENSDARG00000074501 35 0.875 - - - - - 0.875 - - - TNFAIP3 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-120913-2]
83. si:ch1073-170o4.1 ENSDARG00000092780 18 0.875 - - - - - 0.875 - - - si:ch1073-170o4.1 [Source:ZFIN;Acc:ZDB-GENE-030131-7012]
84. si:dkey-105h11.2 13 0.875 - - - - - 0.875 - - - si:dkey-105h11.2
85. zgc:66432 zgc:66432 16 0.875 - - - - - 0.875 - - -
86. si:ch211-244h4.1 si:ch211-244h4.1 1 0.875 - - - - - 0.875 - - -
87. ZNF337_14 ZNF337_14 4 0.875 - - - - - 0.875 - - -
88. CR847844.2 ENSDARG00000102680 1 0.875 - - - - - 0.875 - - -
89. polr2b ENSDARG00000098783 90 0.875 - - - - - 0.875 - - - polymerase (RNA) II (DNA directed) polypeptide B [Source:ZFIN;Acc:ZDB-GENE-041008-1]
90. gpr155a ENSDARG00000090804 27 0.875 - - - - - 0.875 - - - G protein-coupled receptor 155a [Source:ZFIN;Acc:ZDB-GENE-100922-89]
91. si:ch73-236c18.7 ENSDARG00000098706 6 0.875 - - - - - 0.875 - - - si:ch73-236c18.7 [Source:ZFIN;Acc:ZDB-GENE-121214-3]
92. l3mbtl1a ENSDARG00000014828 119 0.875 - - - - - 0.875 - - - l(3)mbt-like 1a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-090312-120]
93. fxyd6 ENSDARG00000100971 51 0.875 - - - - - 0.875 - - - FXYD domain containing ion transport regulator 6 [Source:ZFIN;Acc:ZDB-GENE-030131-5919]
94. crygm2d1 ENSDARG00000087324 258 0.875 - - - - - 0.875 - - - crystallin, gamma M2d1 [Source:ZFIN;Acc:ZDB-GENE-050522-395]
95. si:dkeyp-87e3.3 si:dkeyp-87e3.3 68 0.875 - - - - - 0.875 - - -
96. fbxw9 ENSDARG00000058020 28 0.875 - - - - - 0.875 - - - F-box and WD repeat domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-091204-198]
97. zgc:162969 2 0.875 - - - - - 0.875 - - - zgc:162969
98. si:ch73-24k9.2 ENSDARG00000078912 2 0.875 - - - - - 0.875 - - - si:ch73-24k9.2 [Source:ZFIN;Acc:ZDB-GENE-121214-29]
99. gja3 ENSDARG00000021889, ENSDARG00000116798 49 0.875 - - - - - 0.875 - - - gap junction protein, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-031217-3]
100. styxl1 ENSDARG00000026338 29 0.875 - - - - - 0.875 - - - serine/threonine/tyrosine interacting-like 1 [Source:ZFIN;Acc:ZDB-GENE-040912-45]

There are 1089 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA