Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for pknox1.1_1

Gene Name Gene ID Reads Annotation
pknox1.1_1 ENSDARG00000018765 203 pbx/knotted 1 homeobox 1.1 [Source:ZFIN;Acc:ZDB-GENE-020122-5]










Genes with expression patterns similar to pknox1.1_1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pknox1.1_1 ENSDARG00000018765 203 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 pbx/knotted 1 homeobox 1.1 [Source:ZFIN;Acc:ZDB-GENE-020122-5]
2. spns2 ENSDARG00000061017, ENSDARG00000114768 301 2.358 - 0.762 - 0.833 0.763 - - - - spinster homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-5843]
3. si:dkey-245p14.4 ENSDARG00000070320 418 1.859 - - - - - 0.946 0.913 - - si:dkey-245p14.4 [Source:ZFIN;Acc:ZDB-GENE-061207-63]
4. si:dkey-100n10.2 101 1.784 - - - 0.836 - 0.948 - - - si:dkey-100n10.2
5. si:ch73-222f22.2 ENSDARG00000094271, ENSDARG00000095763 18 1.773 - 0.814 - - - - 0.959 - - si:ch73-222f22.2 [Source:ZFIN;Acc:ZDB-GENE-100921-20]
6. si:ch211-208h1.1 si:ch211-208h1.1 262 1.759 - 0.947 - - - 0.812 - - -
7. CR407547.1 ENSDARG00000117572 41 1.752 - 0.884 - - - 0.868 - - -
8. wasb ENSDARG00000026350 139 1.742 - 0.904 - 0.838 - - - - - Wiskott-Aldrich syndrome (eczema-thrombocytopenia) b [Source:ZFIN;Acc:ZDB-GENE-030131-7098]
9. gng2_1 ENSDARG00000056831 113 1.741 - - - 0.831 - 0.910 - - - guanine nucleotide binding protein (G protein), gamma 2 [Source:ZFIN;Acc:ZDB-GENE-050417-59]
10. si:dkey-231k6.4 si:dkey-231k6.4 72 1.719 - 0.898 - - - 0.821 - - -
11. rad21b ENSDARG00000035655 87 1.718 - 0.798 - - - 0.920 - - - RAD21 cohesin complex component b [Source:ZFIN;Acc:ZDB-GENE-060503-223]
12. CT867948.2 CT867948.2 131 1.712 - 0.853 - - - 0.859 - - -
13. CCDC142 ENSDARG00000101377 161 1.693 - 0.804 - - - 0.889 - - - coiled-coil domain containing 142 [Source:ZFIN;Acc:ZDB-GENE-030131-6705]
14. wu:fb30e12 wu:fb30e12 1254 1.69 - - - 0.867 - 0.823 - - -
15. hpca ENSDARG00000018397, ENSDARG00000110115 3866 1.684 - 0.761 - - - 0.923 - - - hippocalcin [Source:ZFIN;Acc:ZDB-GENE-040426-1683]
16. ube3c ENSDARG00000035978, ENSDARG00000112229 787 1.683 - - - - - 0.872 0.811 - - ubiquitin protein ligase E3C [Source:ZFIN;Acc:ZDB-GENE-040426-1211]
17. dhrs7 ENSDARG00000003444 812 1.679 - - - 0.902 - 0.777 - - - dehydrogenase/reductase (SDR family) member 7 [Source:ZFIN;Acc:ZDB-GENE-060825-21]
18. ZCCHC2 ENSDARG00000067950 204 1.67 - - - 0.837 - 0.833 - - - zinc finger, CCHC domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070912-269]
19. ift57 ENSDARG00000021022 288 1.67 - 0.779 - - - 0.891 - - - intraflagellar transport 57 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-040614-1]
20. st18 663 1.669 - - - 0.780 - 0.889 - - - suppression of tumorigenicity 18, zinc finger
21. atg10 ENSDARG00000104846 85 1.668 - - - - - 0.884 0.784 - - ATG10 autophagy related 10 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-051030-72]
22. irx5a ENSDARG00000034043 1694 1.667 - 0.890 - - - 0.777 - - - iroquois homeobox 5a [Source:ZFIN;Acc:ZDB-GENE-010716-2]
23. CLIP3 ENSDARG00000054456 734 1.667 - - - 0.745 - 0.922 - - - CAP-GLY domain containing linker protein 3 [Source:ZFIN;Acc:ZDB-GENE-131127-193]
24. lmo3 ENSDARG00000008720, ENSDARG00000114518 4773 1.665 - - - 0.791 - 0.874 - - - LIM domain only 3 [Source:ZFIN;Acc:ZDB-GENE-050522-201]
25. npdc1 npdc1 221 1.664 - 0.794 - - - - 0.870 - -
26. atp6ap1a ENSDARG00000041417 898 1.664 - - - 0.719 - 0.945 - - - ATPase H+ transporting accessory protein 1a [Source:ZFIN;Acc:ZDB-GENE-090312-136]
27. gnav1 ENSDARG00000043006 305 1.664 - - - 0.838 - 0.826 - - - guanine nucleotide binding protein (G protein) alpha v1 [Source:ZFIN;Acc:ZDB-GENE-081031-92]
28. CABZ01062083.1 CABZ01062083.1 40 1.659 - 0.798 - - - 0.861 - - -
29. P2RY14 ENSDARG00000103305 41 1.656 - 0.790 - - - - 0.866 - - purinergic receptor P2Y14 [Source:HGNC Symbol;Acc:HGNC:16442]
30. spsb1 ENSDARG00000056515, ENSDARG00000110015 788 1.645 - - - - - 0.739 0.906 - - splA/ryanodine receptor domain and SOCS box containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6122]
31. RNF38 ENSDARG00000062055 3901 1.644 - - - 0.846 - 0.798 - - - ring finger protein 38 [Source:ZFIN;Acc:ZDB-GENE-030131-8693]
32. rgs20 ENSDARG00000038859 331 1.637 - - - 0.767 - 0.870 - - - regulator of G protein signaling 20 [Source:ZFIN;Acc:ZDB-GENE-040718-128]
33. cdk10 ENSDARG00000034256 166 1.634 - 0.750 - - - 0.884 - - - cyclin-dependent kinase 10 [Source:ZFIN;Acc:ZDB-GENE-050417-94]
34. NHSL1 NHSL1 182 1.634 - 0.814 - 0.820 - - - - -
35. uvrag ENSDARG00000023815 424 1.628 - - - 0.786 - 0.842 - - - UV radiation resistance associated gene [Source:ZFIN;Acc:ZDB-GENE-040426-924]
36. AVL9 ENSDARG00000055538 329 1.625 - 0.741 - - - 0.884 - - - AVL9 homolog (S. cerevisiase) [Source:ZFIN;Acc:ZDB-GENE-060825-261]
37. AL935128.1 AL935128.1 238 1.624 - 0.827 - - - - 0.797 - -
38. gak ENSDARG00000090654 695 1.618 - - - 0.721 - 0.897 - - - cyclin G associated kinase [Source:ZFIN;Acc:ZDB-GENE-041210-358]
39. nrn1b ENSDARG00000042656 44 1.614 - 0.728 - - - 0.886 - - - neuritin 1b [Source:ZFIN;Acc:ZDB-GENE-041010-98]
40. TMEM185A TMEM185A 5505 1.614 - - - 0.818 - 0.796 - - -
41. C1H10orf12 C1H10orf12 1663 1.614 - - - 0.718 - 0.896 - - -
42. sacs ENSDARG00000091042 314 1.611 - - - - - 0.900 0.711 - - sacsin molecular chaperone [Source:ZFIN;Acc:ZDB-GENE-110411-146]
43. CABZ01038514.1 CABZ01038514.1 724 1.606 - - - 0.711 - 0.895 - - -
44. appb ENSDARG00000055543, ENSDARG00000109552 4461 1.605 - - - 0.722 - 0.883 - - - amyloid beta (A4) precursor protein b [Source:ZFIN;Acc:ZDB-GENE-020220-1]
45. synm ENSDARG00000062350, ENSDARG00000113948, ENSDARG00000114029 483 1.604 - 0.740 - - - 0.864 - - - synemin, intermediate filament protein [Source:ZFIN;Acc:ZDB-GENE-050419-81]
46. MAP4 MAP4 315 1.603 - 0.805 - - - 0.798 - - -
47. mipep ENSDARG00000055344 63 1.592 - 0.753 - - - 0.839 - - - mitochondrial intermediate peptidase [Source:ZFIN;Acc:ZDB-GENE-060503-662]
48. phf10 ENSDARG00000070084 1210 1.587 - - - 0.797 - 0.790 - - - PHD finger protein 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1573]
49. DENND6A DENND6A 648 1.587 - 0.736 - - - 0.851 - - -
50. si:dkey-25e11.10 si:dkey-25e11.10 955 1.584 - 0.796 - - - 0.788 - - -
51. fgd 377 1.582 - 0.721 - - - 0.861 - - - faciogenital dysplasia
52. CABZ01051991.1 CABZ01051991.1 346 1.575 - - - 0.817 - 0.758 - - -
53. TOR4A_1 TOR4A_1 20 1.569 - 0.702 - - - - 0.867 - -
54. CDC42BPA CDC42BPA 295 1.566 0.724 - - - - 0.842 - - -
55. znf710a ENSDARG00000014680 582 1.562 - - - 0.827 - 0.735 - - - zinc finger protein 710a [Source:ZFIN;Acc:ZDB-GENE-030131-5559]
56. si:ch211-241e1.5 ENSDARG00000008906 70 1.561 - - - - - 0.788 0.773 - - si:ch211-241e1.5 [Source:ZFIN;Acc:ZDB-GENE-030131-6298]
57. PARD3B PARD3B 401 1.56 - - - 0.812 - 0.748 - - -
58. si:ch211-215p11.4 si:ch211-215p11.4 67 1.56 - 0.737 - - - 0.823 - - -
59. runx3 ENSDARG00000052826 247 1.556 - 0.803 - - - 0.753 - - - runt-related transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-000605-2]
60. CABZ01085858.1 CABZ01085858.1 355 1.554 - - - 0.787 - 0.767 - - -
61. dcp1a ENSDARG00000100136 714 1.549 - - - 0.770 - 0.779 - - - decapping mRNA 1A [Source:ZFIN;Acc:ZDB-GENE-030723-5]
62. SHC3 ENSDARG00000098909 332 1.548 - - - 0.703 - 0.845 - - - SHC adaptor protein 3 [Source:HGNC Symbol;Acc:HGNC:18181]
63. unc119b ENSDARG00000044362 1528 1.542 - - - 0.702 - 0.840 - - - unc-119 homolog b (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-050201-2]
64. CDKN1C CDKN1C 667 1.54 - - - 0.825 - 0.715 - - -
65. mafg2 mafg2 1041 1.539 - 0.733 - - - 0.806 - - -
66. si:dkey-256h2.1 ENSDARG00000021849 38 1.534 - 0.702 - - - 0.832 - - - si:dkey-256h2.1 [Source:ZFIN;Acc:ZDB-GENE-030131-9466]
67. ubtf ENSDARG00000035066 4070 1.525 - - - 0.726 - 0.799 - - - upstream binding transcription factor [Source:ZFIN;Acc:ZDB-GENE-030616-252]
68. sarm1 ENSDARG00000010610 387 1.525 - - - - - 0.791 0.734 - - sterile alpha and TIR motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-040219-1]
69. pou4f2 ENSDARG00000069737 451 1.52 - 0.814 - - - 0.706 - - - POU class 4 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-040401-1]
70. itfg2 ENSDARG00000002174 114 1.52 - 0.702 - - - 0.818 - - - integrin alpha FG-GAP repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-041008-161]
71. JPH3 ENSDARG00000102204 283 1.519 - - - - - 0.787 0.732 - - junctophilin 3 [Source:ZFIN;Acc:ZDB-GENE-060503-415]
72. gtf3c3 ENSDARG00000043247 202 1.515 - - - - - 0.718 0.797 - - general transcription factor IIIC, polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-040914-80]
73. pnkd ENSDARG00000071032 447 1.508 0.760 - - 0.748 - - - - - PNKD, MBL domain containing [Source:ZFIN;Acc:ZDB-GENE-050208-278]
74. LDLRAD4 LDLRAD4 1237 1.505 - - - 0.735 - 0.770 - - -
75. si:dkey-10f21.16 si:dkey-10f21.16 252 1.505 - 0.720 - - - 0.785 - - -
76. tubgcp2 ENSDARG00000013079 1520 1.497 - - - 0.742 - 0.755 - - - tubulin, gamma complex associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-031118-150]
77. acad8 ENSDARG00000042658, ENSDARG00000116771 259 1.488 - 0.782 - - - 0.706 - - - acyl-CoA dehydrogenase family, member 8 [Source:ZFIN;Acc:ZDB-GENE-040426-828]
78. si:ch211-214b16.4 ENSDARG00000074345 261 1.478 - 0.751 - - - 0.727 - - - si:ch211-214b16.4 [Source:ZFIN;Acc:ZDB-GENE-081105-53]
79. adam23a ENSDARG00000062323 580 1.474 - - - 0.773 - 0.701 - - - ADAM metallopeptidase domain 23a [Source:ZFIN;Acc:ZDB-GENE-070810-2]
80. cwc25 ENSDARG00000003382 2134 1.472 - - - 0.722 - 0.750 - - - CWC25 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-2817]
81. zic2b ENSDARG00000037178, ENSDARG00000112354 993 1.464 - - - 0.706 - 0.758 - - - zic family member 2 (odd-paired homolog, Drosophila) b [Source:ZFIN;Acc:ZDB-GENE-030219-92]
82. tbck ENSDARG00000013667 406 1.46 - - - - - 0.702 0.758 - - TBC1 domain containing kinase [Source:ZFIN;Acc:ZDB-GENE-070112-1062]
83. pik3c3 ENSDARG00000054829 559 1.454 - - - 0.724 - 0.730 - - - phosphatidylinositol 3-kinase, catalytic subunit type 3 [Source:ZFIN;Acc:ZDB-GENE-050410-13]
84. tmem47 ENSDARG00000057322 4691 1.447 - 0.738 - - - 0.709 - - - transmembrane protein 47 [Source:ZFIN;Acc:ZDB-GENE-040426-2644]
85. pfkpa ENSDARG00000028000 1206 1.446 - 0.741 - - 0.705 - - - - phosphofructokinase, platelet a [Source:ZFIN;Acc:ZDB-GENE-091112-22]
86. hspb11 ENSDARG00000002204 879 1.437 - 0.713 - - - 0.724 - - - heat shock protein, alpha-crystallin-related, b11 [Source:ZFIN;Acc:ZDB-GENE-030131-5148]
87. SNCAIP ENSDARG00000100198 522 1.431 - 0.721 - 0.710 - - - - - synuclein, alpha interacting protein [Source:ZFIN;Acc:ZDB-GENE-080204-71]
88. prkcbp1l ENSDARG00000011932 2714 1.43 0.702 - - - - 0.728 - - - protein kinase C binding protein 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-2199]
89. CRAT CRAT 521 1.421 - 0.713 - - - 0.708 - - -
90. gys1 ENSDARG00000016875 2037 1.414 0.702 0.712 - - - - - - - glycogen synthase 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-040426-1243]
91. nkx6.1 ENSDARG00000022569 3779 1.414 - 0.713 - 0.701 - - - - - NK6 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040718-178]
92. mtmr7a ENSDARG00000037101, ENSDARG00000111336 161 1 - 1.000 - - - - - - - myotubularin related protein 7a [Source:ZFIN;Acc:ZDB-GENE-060421-7754]
93. aox3 aox3 399 1 - 1.000 - - - - - - -
94. BX908759.1 BX908759.1 52 0.98 - - - - - - 0.980 - -
95. cyb5r4 ENSDARG00000020898 119 0.977 - - - - - - 0.977 - - cytochrome b5 reductase 4 [Source:ZFIN;Acc:ZDB-GENE-050522-225]
96. rab42a ENSDARG00000034215 692 0.977 - - - - - - 0.977 - - RAB42, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-040426-1983]
97. mlx ENSDARG00000037891 433 0.974 - - - 0.974 - - - - - MLX, MAX dimerization protein [Source:ZFIN;Acc:ZDB-GENE-050522-316]
98. atr ENSDARG00000079625 231 0.973 - - - - - - 0.973 - - ATR serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-070912-458]
99. CABZ01088365.1 CABZ01088365.1 66 0.971 - - - - - - 0.971 - -
100. CR848728.2 CR848728.2 99 0.971 - - - - - - 0.971 - -

There are 2091 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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