Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for pknox1.1

Gene Name Gene ID Reads Annotation
pknox1.1 ENSDARG00000018765 2149 pbx/knotted 1 homeobox 1.1 [Source:ZFIN;Acc:ZDB-GENE-020122-5]










Genes with expression patterns similar to pknox1.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pknox1.1 ENSDARG00000018765 2149 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 pbx/knotted 1 homeobox 1.1 [Source:ZFIN;Acc:ZDB-GENE-020122-5]
2. mcrs1 ENSDARG00000020840 3232 2.851 - 0.996 - 0.959 - - - - 0.896 microspherule protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2434]
3. tox4 tox4 1671 2.601 - - - 0.958 - 0.765 - - 0.878
4. KDM6B KDM6B 10265 2.529 - - - 0.897 - - - 0.831 0.801
5. sdha ENSDARG00000016721 8255 2.522 - 0.860 - 0.942 - - - 0.720 - succinate dehydrogenase complex, subunit A, flavoprotein (Fp) [Source:ZFIN;Acc:ZDB-GENE-040426-874]
6. s1pr1 ENSDARG00000042690, ENSDARG00000113842, ENSDARG00000116038 2510 2.489 - - - - - - 0.818 0.951 0.720 sphingosine-1-phosphate receptor 1 [Source:ZFIN;Acc:ZDB-GENE-001228-2]
7. cd99l2 ENSDARG00000056722 5036 2.317 - - - - - 0.737 0.813 - 0.767 CD99 molecule-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1986]
8. vcp ENSDARG00000020008, ENSDARG00000116074 2284 1.91 - 0.997 - - - - - - 0.913 valosin containing protein [Source:ZFIN;Acc:ZDB-GENE-030131-5408]
9. fam122b ENSDARG00000036500, ENSDARG00000116582 1408 1.889 - - - 0.956 - - - - 0.933 family with sequence similarity 122B [Source:ZFIN;Acc:ZDB-GENE-040801-204]
10. tmtc4 ENSDARG00000020447 873 1.879 - 0.998 - - - - - - 0.881 transmembrane and tetratricopeptide repeat containing 4 [Source:ZFIN;Acc:ZDB-GENE-070912-148]
11. zgc:173548 ENSDARG00000070048 558 1.865 - - - - - - - 0.978 0.887 zgc:173548 [Source:ZFIN;Acc:ZDB-GENE-070928-39]
12. si:dkey-156k2.6 si:dkey-156k2.6 848 1.862 - - - 0.957 - - - - 0.905
13. tmem59l ENSDARG00000003655 1536 1.859 - - - - - - - 0.967 0.892 transmembrane protein 59-like [Source:ZFIN;Acc:ZDB-GENE-040426-2651]
14. pvrl1b 1645 1.855 - - - - - - - 0.972 0.883 poliovirus receptor-related 1b
15. prkrip1 ENSDARG00000033126, ENSDARG00000113803 1634 1.849 - - - 0.958 - - - - 0.891 PRKR interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-111011-2]
16. ndrg3a ENSDARG00000013087 5581 1.841 - - - - - 0.859 - 0.982 - ndrg family member 3a [Source:ZFIN;Acc:ZDB-GENE-980526-124]
17. cdc34b ENSDARG00000012627 3879 1.84 - - - 0.980 - - - - 0.860 cell division cycle 34 homolog (S. cerevisiae) b [Source:ZFIN;Acc:ZDB-GENE-040718-439]
18. ccdc80 ENSDARG00000000002 1284 1.838 - 0.997 - - - - - - 0.841 coiled-coil domain containing 80 [Source:ZFIN;Acc:ZDB-GENE-030616-56]
19. fam102bb ENSDARG00000002333 1483 1.826 - - - 0.954 - - - - 0.872 family with sequence similarity 102, member B, b [Source:ZFIN;Acc:ZDB-GENE-041014-330]
20. yap1 ENSDARG00000068401, ENSDARG00000112952 16365 1.82 - - - 0.925 - - - 0.895 - Yes-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9710]
21. mcts1 ENSDARG00000025972 4662 1.818 - - - - - - - 0.977 0.841 malignant T cell amplified sequence 1 [Source:ZFIN;Acc:ZDB-GENE-040426-957]
22. cnot3a ENSDARG00000007135 3084 1.813 - - - - - - - 0.988 0.825 CCR4-NOT transcription complex, subunit 3a [Source:ZFIN;Acc:ZDB-GENE-040927-6]
23. plagl2 ENSDARG00000076657 2057 1.807 - 0.998 - - - 0.809 - - - pleiomorphic adenoma gene-like 2 [Source:ZFIN;Acc:ZDB-GENE-020806-1]
24. supt5h ENSDARG00000042724, ENSDARG00000111598 6419 1.789 - - - 0.919 - - - - 0.870 SPT5 homolog, DSIF elongation factor subunit [Source:ZFIN;Acc:ZDB-GENE-001207-1]
25. ebag9 ENSDARG00000040021 2217 1.777 - 0.988 - - - 0.789 - - - estrogen receptor binding site associated, antigen, 9 [Source:ZFIN;Acc:ZDB-GENE-040426-1093]
26. notch1b ENSDARG00000052094 7874 1.777 - 0.996 - - - 0.781 - - - notch 1b [Source:ZFIN;Acc:ZDB-GENE-990415-183]
27. erbb2 ENSDARG00000026294, ENSDARG00000112475 2704 1.776 - 0.995 - - - - - - 0.781 erb-b2 receptor tyrosine kinase 2 [Source:ZFIN;Acc:ZDB-GENE-031118-121]
28. kif18a ENSDARG00000008022 546 1.769 - - - - - 0.825 - - 0.944 kinesin family member 18A [Source:ZFIN;Acc:ZDB-GENE-040426-862]
29. aurkb ENSDARG00000037640 4874 1.764 - 0.996 - - - 0.768 - - - aurora kinase B [Source:ZFIN;Acc:ZDB-GENE-020419-40]
30. pbx2 ENSDARG00000019717 6892 1.758 - 0.992 - - - - - - 0.766 pre-B-cell leukemia homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-000405-5]
31. MAN2A2 ENSDARG00000063101 922 1.757 - - - - - 0.829 - - 0.928 mannosidase, alpha, class 2A, member 2 [Source:ZFIN;Acc:ZDB-GENE-110331-1]
32. ezrb ENSDARG00000025091 2861 1.747 - - - - - - - 0.976 0.771 ezrin b [Source:ZFIN;Acc:ZDB-GENE-050803-1]
33. cenpk ENSDARG00000039616 744 1.74 - - - - - 0.825 - - 0.915 centromere protein K [Source:ZFIN;Acc:ZDB-GENE-090313-204]
34. smyd2a ENSDARG00000055151 2505 1.728 - 0.995 - - - 0.733 - - - SET and MYND domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-050320-126]
35. daxx ENSDARG00000000729 734 1.72 - - - - - 0.812 - - 0.908 death-domain associated protein [Source:ZFIN;Acc:ZDB-GENE-010110-3]
36. SSBP4 ENSDARG00000056483 5156 1.719 - - - 0.929 - - 0.790 - - single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
37. acaa2 ENSDARG00000038881 2649 1.715 - - - - - - - 0.986 0.729 acetyl-CoA acyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1996]
38. bmp4 ENSDARG00000019995 2038 1.71 - - - - - 0.779 - 0.931 - bone morphogenetic protein 4 [Source:ZFIN;Acc:ZDB-GENE-980528-2059]
39. pspc1 ENSDARG00000006621 966 1.71 - - - - - 0.819 - - 0.891 paraspeckle component 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9530]
40. srp68 ENSDARG00000020820 1719 1.707 - - - - - 0.799 - 0.908 - signal recognition particle 68 [Source:ZFIN;Acc:ZDB-GENE-040831-3]
41. slco3a1 ENSDARG00000018726 590 1.707 - - - - - 0.716 - 0.991 - solute carrier organic anion transporter family, member 3A1 [Source:ZFIN;Acc:ZDB-GENE-030131-8662]
42. bmpr2a ENSDARG00000011941 2972 1.706 - - - 0.944 - 0.762 - - - bone morphogenetic protein receptor, type II a (serine/threonine kinase) [Source:ZFIN;Acc:ZDB-GENE-070618-1]
43. ncalda ENSDARG00000070688 5069 1.705 - - - 0.936 - - - - 0.769 neurocalcin delta a [Source:ZFIN;Acc:ZDB-GENE-080220-28]
44. si:ch211-133l11.10 ENSDARG00000005626 381 1.705 - - - - - 0.804 - - 0.901 si:ch211-133l11.10 [Source:ZFIN;Acc:ZDB-GENE-141219-14]
45. polr2l ENSDARG00000058349, ENSDARG00000113402 3300 1.702 - 0.993 - - - 0.709 - - - polymerase (RNA) II (DNA directed) polypeptide L [Source:ZFIN;Acc:ZDB-GENE-050522-181]
46. cwc25 ENSDARG00000003382 2134 1.702 - - - - - 0.793 - - 0.909 CWC25 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-2817]
47. alcamb ENSDARG00000058538 5672 1.7 - - - 0.963 - 0.737 - - - activated leukocyte cell adhesion molecule b [Source:ZFIN;Acc:ZDB-GENE-030131-1768]
48. phc2b_1 ENSDARG00000013224 1316 1.693 - - - - - 0.813 - - 0.880 polyhomeotic homolog 2b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-1113]
49. sumo3a ENSDARG00000028119 13447 1.691 - 0.977 - - - 0.714 - - - small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
50. adnp2b ENSDARG00000028431 4683 1.69 - - - - - 0.763 - 0.927 - ADNP homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5930]
51. emc3 ENSDARG00000020607 3406 1.688 - - - 0.944 - - - - 0.744 ER membrane protein complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2904]
52. caly ENSDARG00000036008 1002 1.686 - - - - - 0.785 - - 0.901 calcyon neuron-specific vesicular protein [Source:ZFIN;Acc:ZDB-GENE-090313-405]
53. zc4h2 ENSDARG00000015314, ENSDARG00000112180 5141 1.683 - - - 0.926 - 0.757 - - - zinc finger, C4H2 domain containing [Source:ZFIN;Acc:ZDB-GENE-030131-2207]
54. tcf3b ENSDARG00000099999, ENSDARG00000112646 3589 1.679 - - - 0.965 - - 0.714 - - transcription factor 3b [Source:ZFIN;Acc:ZDB-GENE-051113-64]
55. rbbp6 ENSDARG00000037919 4813 1.675 - - - 0.971 - - - - 0.704 retinoblastoma binding protein 6 [Source:ZFIN;Acc:ZDB-GENE-040930-5]
56. brms1lb ENSDARG00000018047 453 1.665 - - - - - - 0.729 - 0.936 BRMS1 like transcriptional repressor b [Source:ZFIN;Acc:ZDB-GENE-081031-54]
57. RBM12B ENSDARG00000079717 541 1.657 - - - - - 0.777 - - 0.880 RNA binding motif protein 12B [Source:ZFIN;Acc:ZDB-GENE-030131-6428]
58. phf10 ENSDARG00000070084 1210 1.651 - - - - - 0.734 - - 0.917 PHD finger protein 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1573]
59. tardbpl ENSDARG00000004452, ENSDARG00000116205 12160 1.649 - 0.925 - - - - 0.724 - - TAR DNA binding protein, like [Source:ZFIN;Acc:ZDB-GENE-031030-1]
60. hnrnpub ENSDARG00000004735 16496 1.648 - 0.904 - - - - 0.744 - - heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
61. her15.2 her15.2 1701 1.648 - - - - - 0.789 - - 0.859
62. thsd7ba ENSDARG00000095022 231 1.643 - - - - - 0.741 - - 0.902 thrombospondin, type I, domain containing 7Ba [Source:ZFIN;Acc:ZDB-GENE-070621-2]
63. st8sia5 ENSDARG00000036584 529 1.641 - - - - - 0.733 - - 0.908 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 [Source:ZFIN;Acc:ZDB-GENE-060322-8]
64. sepw2a 8597 1.64 - - - 0.923 - 0.717 - - - selenoprotein W, 2a
65. nadl1.2 695 1.632 - - - - - 0.769 - - 0.863 neural adhesion molecule L1.2, transcript variant X1
66. klhdc10 ENSDARG00000007764 529 1.625 - - - - - 0.761 - - 0.864 kelch domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-040426-776]
67. psmc3 ENSDARG00000007141 5592 1.619 - - - - - - 0.738 - 0.881 proteasome 26S subunit, ATPase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-666]
68. CABZ01084569.1 CABZ01084569.1 650 1.616 - - - - - 0.718 - - 0.898
69. ZNF462 ENSDARG00000112909 1132 1.616 - - - - - 0.705 - - 0.911 zinc finger protein 462 [Source:HGNC Symbol;Acc:HGNC:21684]
70. plagx ENSDARG00000036855 3768 1.615 - - - - - - 0.828 - 0.787 pleiomorphic adenoma gene X [Source:ZFIN;Acc:ZDB-GENE-030131-839]
71. ptpro ENSDARG00000100422, ENSDARG00000110470 1850 1.614 - - - - - 0.774 - - 0.840 protein tyrosine phosphatase, receptor type, O [Source:ZFIN;Acc:ZDB-GENE-070424-54]
72. palm1b ENSDARG00000007818 2128 1.613 - - - - - 0.831 - - 0.782 paralemmin 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1147]
73. espl1 ENSDARG00000075354 818 1.609 - - - - - 0.811 - - 0.798 extra spindle pole bodies like 1, separase [Source:ZFIN;Acc:ZDB-GENE-030131-5188]
74. si:ch211-113e8.10 ENSDARG00000079631 498 1.608 - - - - - 0.707 - - 0.901 si:ch211-113e8.10 [Source:ZFIN;Acc:ZDB-GENE-090313-11]
75. hmgb3a ENSDARG00000056725 15668 1.607 - - - 0.860 - - 0.747 - - high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
76. HDX ENSDARG00000079382 513 1.605 - - - - - - 0.705 - 0.900 highly divergent homeobox [Source:ZFIN;Acc:ZDB-GENE-140106-165]
77. abi2b ENSDARG00000014875 2259 1.592 - - - - - 0.739 - - 0.853 abl-interactor 2b [Source:ZFIN;Acc:ZDB-GENE-060519-5]
78. gng2_1 ENSDARG00000056831 113 1.586 - - - - - 0.826 0.760 - - guanine nucleotide binding protein (G protein), gamma 2 [Source:ZFIN;Acc:ZDB-GENE-050417-59]
79. pik3c3 ENSDARG00000054829 559 1.582 - - - - - 0.846 0.736 - - phosphatidylinositol 3-kinase, catalytic subunit type 3 [Source:ZFIN;Acc:ZDB-GENE-050410-13]
80. memo1 ENSDARG00000010823 1681 1.58 - - - - - 0.748 - - 0.832 mediator of cell motility 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5571]
81. myo1b ENSDARG00000024694 1761 1.567 - - - - - 0.720 - - 0.847 myosin IB [Source:ZFIN;Acc:ZDB-GENE-030131-695]
82. anxa13l ENSDARG00000013613 631 1.562 - - - - - 0.812 0.750 - - annexin A13, like [Source:ZFIN;Acc:ZDB-GENE-050522-310]
83. xpr1 xpr1 840 1.56 - - - - - - 0.717 - 0.843
84. dut ENSDARG00000106529 3120 1.559 - - - - - - 0.783 - 0.776 deoxyuridine triphosphatase [Source:ZFIN;Acc:ZDB-GENE-041010-93]
85. zgc:101846 15202 1.559 - 0.746 - 0.813 - - - - - zgc:101846
86. KRT18 ENSDARG00000018404, ENSDARG00000109528 6022 1.558 - - - - - - - 0.749 0.809 keratin 18 [Source:ZFIN;Acc:ZDB-GENE-030411-6]
87. rerea ENSDARG00000077353 4162 1.556 - - - - - 0.834 - - 0.722 arginine-glutamic acid dipeptide (RE) repeats a [Source:ZFIN;Acc:ZDB-GENE-060718-1]
88. RBM6 ENSDARG00000077060 3521 1.552 - - - - - 0.726 - - 0.826 RNA binding motif protein 6 [Source:ZFIN;Acc:ZDB-GENE-050309-79]
89. kcnj11l ENSDARG00000031438 369 1.551 - - - - - 0.818 0.733 - - potassium inwardly-rectifying channel, subfamily J, member 11, like [Source:ZFIN;Acc:ZDB-GENE-050222-2]
90. ank2b ENSDARG00000043313 3065 1.545 - - - - - - 0.710 - 0.835 ankyrin 2b, neuronal [Source:ZFIN;Acc:ZDB-GENE-041010-165]
91. appb ENSDARG00000055543, ENSDARG00000109552 4461 1.545 - - - - - 0.733 0.812 - - amyloid beta (A4) precursor protein b [Source:ZFIN;Acc:ZDB-GENE-020220-1]
92. tnc ENSDARG00000021948, ENSDARG00000113518 12162 1.537 - - - - - 0.761 - 0.776 - tenascin C [Source:ZFIN;Acc:ZDB-GENE-980526-104]
93. psmb3 ENSDARG00000013938 10744 1.531 - - - 0.802 - 0.729 - - - proteasome subunit beta 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2682]
94. ssbp3b ENSDARG00000030155 7163 1.521 - - - - - 0.727 0.794 - - single stranded DNA binding protein 3b [Source:ZFIN;Acc:ZDB-GENE-040426-2801]
95. slc29a1a ENSDARG00000101289 2074 1.519 - - - - - 0.787 - - 0.732 solute carrier family 29 (equilibrative nucleoside transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-050913-138]
96. ek1 ENSDARG00000020080 742 1.508 - - - - - 0.771 0.737 - - eph-like kinase 1 [Source:ZFIN;Acc:ZDB-GENE-990415-58]
97. ephb3a ENSDARG00000031548 1872 1.495 - - - - - - 0.786 - 0.709 eph receptor B3a [Source:ZFIN;Acc:ZDB-GENE-990415-60]
98. uhrf1 ENSDARG00000103409 3282 1.49 - - - - - 0.719 - - 0.771 ubiquitin-like with PHD and ring finger domains 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2039]
99. cars ENSDARG00000036164 2019 1.489 - - - - - - 0.706 - 0.783 cysteinyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030328-29]
100. CACFD1 ENSDARG00000090818 1298 1.469 - - - - - 0.761 0.708 - - calcium channel flower domain containing 1 [Source:HGNC Symbol;Acc:HGNC:1365]

There are 1996 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA