Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for pkhd1l1

Gene Name Gene ID Reads Annotation
pkhd1l1 ENSDARG00000091116 23 polycystic kidney and hepatic disease 1 (autosomal recessive)-like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-475]










Genes with expression patterns similar to pkhd1l1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pkhd1l1 ENSDARG00000091116 23 5 - - - - 1.000 1.000 1.000 1.000 1.000 polycystic kidney and hepatic disease 1 (autosomal recessive)-like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-475]
2. dctn1a ENSDARG00000019743 45 1.858 - - - - - 0.858 1.000 - - dynactin 1a [Source:ZFIN;Acc:ZDB-GENE-070117-2205]
3. gpr112b gpr112b 28 1.851 - - - - - 0.897 0.954 - -
4. paqr7a ENSDARG00000100462 15 1.811 - - - - - 0.897 0.914 - - progestin and adipoQ receptor family member VII, a [Source:ZFIN;Acc:ZDB-GENE-070705-346]
5. hnrnpc ENSDARG00000053810, ENSDARG00000113662 66 1.753 - - - - - 0.897 0.856 - - heterogeneous nuclear ribonucleoprotein C [Source:ZFIN;Acc:ZDB-GENE-040426-2043]
6. zgc:171551 ENSDARG00000073708, ENSDARG00000111940 24 1.718 - - - - - - 1.000 0.718 - zgc:171551 [Source:ZFIN;Acc:ZDB-GENE-080220-8]
7. gsg1l ENSDARG00000037390 181 1.693 - - - - - 0.897 - 0.796 - gsg1-like [Source:ZFIN;Acc:ZDB-GENE-050913-27]
8. cables2b ENSDARG00000017154 131 1.685 - - - - - 0.884 0.801 - - Cdk5 and Abl enzyme substrate 2b [Source:ZFIN;Acc:ZDB-GENE-090313-249]
9. CABZ01075275.1 CABZ01075275.1 124 1.677 - - - - - 0.854 0.823 - -
10. si:ch73-60p2.1 si:ch73-60p2.1 21 1.665 - - - - - 0.732 0.933 - -
11. gsto1 ENSDARG00000022183 13 1.655 - - - - - 0.897 0.758 - - glutathione S-transferase omega 1 [Source:ZFIN;Acc:ZDB-GENE-040718-365]
12. CD53 CD53 108 1.65 - - - - - 0.789 0.861 - -
13. tmub2 ENSDARG00000056467, ENSDARG00000109925 100 1.639 - - - - - 0.903 0.736 - - transmembrane and ubiquitin-like domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030616-254]
14. si:ch211-284e13.5 ENSDARG00000094725 68 1.635 - - - - - 0.852 0.783 - - si:ch211-284e13.5 [Source:ZFIN;Acc:ZDB-GENE-060526-162]
15. si:dkey-6n3.3 si:dkey-6n3.3 9 1.629 - - - - 0.737 - 0.892 - -
16. casp3b ENSDARG00000055045 54 1.605 - - - - 0.737 0.868 - - - caspase 3, apoptosis-related cysteine peptidase b [Source:ZFIN;Acc:ZDB-GENE-070607-1]
17. alk ENSDARG00000095833 32 1.598 - - - - - 0.897 0.701 - - ALK receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-031027-1]
18. sytl4 ENSDARG00000102433 19 1.592 - - - - 0.727 0.865 - - - synaptotagmin-like 4 [Source:ZFIN;Acc:ZDB-GENE-070209-217]
19. IYD IYD 8 1 - - - - - - 1.000 - -
20. si:ch211-233m11.3 si:ch211-233m11.3 1 1 - - - - - - 1.000 - -
21. si:dkey-47k20.6 si:dkey-47k20.6 2 1 - - - - - - 1.000 - -
22. CU633857.1 ENSDARG00000115315 21 1 - - - - - - 1.000 - - multiciliate differentiation and DNA synthesis associated cell cycle protein [Source:NCBI gene;Acc:100537904]
23. cyp2n13 ENSDARG00000042953 10 1 - - - - - - 1.000 - - cytochrome P450, family 2, subfamily N, polypeptide 13 [Source:ZFIN;Acc:ZDB-GENE-041001-158]
24. si:dkeyp-91h9.1 si:dkeyp-91h9.1 2 1 - - - - - - 1.000 - -
25. pxn pxn 10 1 - - - - - - 1.000 - -
26. BX323836.1 BX323836.1 1 1 - - - - - - 1.000 - -
27. si:dkey-56i24.1 ENSDARG00000053345, ENSDARG00000078152 11 1 - - - - - - 1.000 - - si:dkey-56i24.1 [Source:ZFIN;Acc:ZDB-GENE-081105-8]
28. si:dkey-286j17.3 si:dkey-286j17.3 8 1 - - - - - - 1.000 - -
29. SIKE1 2 1 - - - - - - 1.000 - - suppressor of IKBKE 1, transcript variant X3
30. CU672227.1 ENSDARG00000105807 15 1 - - - - - - 1.000 - -
31. si:dkey-148e22.3 si:dkey-148e22.3 4 1 - - - - - - 1.000 - -
32. si:dkey-150h13.1 si:dkey-150h13.1 1 1 - - - - - - 1.000 - -
33. cart1 ENSDARG00000070930 46 1 - - - - - - 1.000 - - cocaine- and amphetamine-regulated transcript 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8025]
34. gcnt3 ENSDARG00000060471 37 1 - - - - - - 1.000 - - glucosaminyl (N-acetyl) transferase 3, mucin type [Source:ZFIN;Acc:ZDB-GENE-110411-253]
35. CABZ01080550.1 ENSDARG00000100621 3 1 - - - - - - 1.000 - -
36. il11a ENSDARG00000037859 5 1 - - - - - - 1.000 - - interleukin 11a [Source:ZFIN;Acc:ZDB-GENE-051019-1]
37. cx55.5 13 1 - - - - - - 1.000 - - connexin 55.5, transcript variant X1
38. ATP13A5 ATP13A5 13 1 - - - - - - 1.000 - -
39. CECR6 25 1 - - - - - - 1.000 - - cat eye syndrome chromosome region, candidate 6
40. CR854891.1 CR854891.1 7 1 - - - - - - 1.000 - -
41. TRIM8 TRIM8 5 1 - - - - - - 1.000 - -
42. zgc:152670 ENSDARG00000017038, ENSDARG00000117151 587 1 - - - - - - 1.000 - - zgc:152670 [Source:ZFIN;Acc:ZDB-GENE-060929-954]
43. irx4a ENSDARG00000035648 71 1 - - - - - - 1.000 - - iroquois homeobox 4a [Source:ZFIN;Acc:ZDB-GENE-040426-1825]
44. si:ch211-239f4.6 ENSDARG00000093347 2 1 - - - - - - 1.000 - - si:ch211-239f4.6 [Source:ZFIN;Acc:ZDB-GENE-061009-18]
45. SPDEF ENSDARG00000029930 60 1 - - - - - - 1.000 - - SAM pointed domain containing ETS transcription factor [Source:HGNC Symbol;Acc:HGNC:17257]
46. si:dkey-261l7.2 ENSDARG00000094345 51 1 - - - - - - 1.000 - - si:dkey-261l7.2 [Source:ZFIN;Acc:ZDB-GENE-090313-288]
47. CU855711.1 ENSDARG00000088643 6 1 - - - - - - 1.000 - - legumain-like [Source:NCBI gene;Acc:108191752]
48. traf1 ENSDARG00000069482 50 1 - - - - - - 1.000 - - TNF receptor-associated factor 1 [Source:ZFIN;Acc:ZDB-GENE-071120-4]
49. nanog ENSDARG00000075113 10 1 - - - - - - 1.000 - - nanog homeobox [Source:ZFIN;Acc:ZDB-GENE-030131-5486]
50. slc5a1 ENSDARG00000013871 4 1 - - - - - - 1.000 - - solute carrier family 5 (sodium/glucose cotransporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1524]
51. CABZ01002626.1 CABZ01002626.1 29 1 - - - - - - 1.000 - -
52. GRINA GRINA 12 1 - - - - - - 1.000 - -
53. sh2d1aa ENSDARG00000095348 4 1 - - - - - - 1.000 - - SH2 domain containing 1A duplicate a [Source:ZFIN;Acc:ZDB-GENE-060526-212]
54. EP400 ENSDARG00000100965 45 1 - - - - - - 1.000 - - E1A binding protein p400 [Source:ZFIN;Acc:ZDB-GENE-081104-186]
55. PLEKHS1_2 PLEKHS1_2 21 1 - - - - - - 1.000 - -
56. PGBD4_4 PGBD4_4 15 1 - - - - - - 1.000 - -
57. si:ch211-10j20.7 si:ch211-10j20.7 8 1 - - - - - - 1.000 - -
58. st6galnac ENSDARG00000086292 29 1 - - - - - - 1.000 - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase [Source:ZFIN;Acc:ZDB-GENE-050309-58]
59. dbpa ENSDARG00000063014 107 1 - - - - - - 1.000 - - D site albumin promoter binding protein a [Source:ZFIN;Acc:ZDB-GENE-060503-802]
60. si:ch211-122l24.5 si:ch211-122l24.5 1 1 - - - - - - 1.000 - -
61. phf21aa ENSDARG00000006878 31 1 - - - - - - 1.000 - - PHD finger protein 21Aa [Source:ZFIN;Acc:ZDB-GENE-050208-99]
62. nitr3a_1 ENSDARG00000110676 44 1 - - - - - - 1.000 - - novel immune-type receptor 3a [Source:NCBI gene;Acc:60649]
63. or106-10 ENSDARG00000091143, ENSDARG00000111913, ENSDARG00000114806 1 1 - - - - - - 1.000 - - odorant receptor, family G, subfamily 106, member 10 [Source:ZFIN;Acc:ZDB-GENE-070806-62]
64. si:dkeyp-3f10.17 ENSDARG00000087254 1 1 - - - - - - 1.000 - - si:dkeyp-3f10.17 [Source:ZFIN;Acc:ZDB-GENE-081104-467]
65. bdkrb1 ENSDARG00000020744 4 1 - - - - - - 1.000 - - bradykinin receptor B1 [Source:ZFIN;Acc:ZDB-GENE-030814-1]
66. ZC3H12A ENSDARG00000005271 5 1 - - - - - - 1.000 - - zinc finger CCCH-type containing 12A [Source:ZFIN;Acc:ZDB-GENE-110411-6]
67. ucn3l ENSDARG00000087241 29 1 - - - - - - 1.000 - - urocortin 3, like [Source:ZFIN;Acc:ZDB-GENE-060130-250]
68. FRMD7 ENSDARG00000068958 17 1 - - - - - - 1.000 - - FERM domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-060825-67]
69. si:ch211-12e1.5 si:ch211-12e1.5 14 1 - - - - - - 1.000 - -
70. LRRC69 LRRC69 1 1 - - - - - - 1.000 - -
71. XKR8 XKR8 9 1 - - - - - - 1.000 - -
72. fbxo32 ENSDARG00000040277 93 1 - - - - - - 1.000 - - F-box protein 32 [Source:ZFIN;Acc:ZDB-GENE-040426-1040]
73. zgc:173443 ENSDARG00000034403 26 1 - - - - - - 1.000 - - zgc:173443 [Source:ZFIN;Acc:ZDB-GENE-071004-101]
74. urgcp ENSDARG00000036767 6 1 - - - - - - 1.000 - - upregulator of cell proliferation [Source:ZFIN;Acc:ZDB-GENE-120215-160]
75. slc6a18 ENSDARG00000068387 6 1 - - - - - - 1.000 - - solute carrier family 6 (neutral amino acid transporter), member 18 [Source:ZFIN;Acc:ZDB-GENE-080219-9]
76. GALNTL6 ENSDARG00000040048 33 1 - - - - - - 1.000 - - polypeptide N-acetylgalactosaminyltransferase like 6 [Source:HGNC Symbol;Acc:HGNC:33844]
77. si:ch211-199m9.2 si:ch211-199m9.2 9 1 - - - - - - 1.000 - -
78. grtp1b ENSDARG00000030269 24 1 - - - - - - 1.000 - - growth hormone regulated TBC protein 1b [Source:ZFIN;Acc:ZDB-GENE-050417-346]
79. CABZ01034857.1 CABZ01034857.1 1 1 - - - - - - 1.000 - -
80. CR388163.4 CR388163.4 4 1 - - - - - - 1.000 - -
81. MMP20 MMP20 1 1 - - - - - - 1.000 - -
82. lim2.1 ENSDARG00000068974, ENSDARG00000114525 233 1 - - - - - - 1.000 - - lens intrinsic membrane protein 2.1 [Source:ZFIN;Acc:ZDB-GENE-050522-398]
83. smad6b ENSDARG00000031763 12 1 - - - - - - 1.000 - - SMAD family member 6b [Source:ZFIN;Acc:ZDB-GENE-050419-198]
84. SEMA6B SEMA6B 35 1 - - - - - - 1.000 - -
85. si:ch211-218m3.16 ENSDARG00000044336 33 1 - - - - - - 1.000 - - si:ch211-218m3.16 [Source:ZFIN;Acc:ZDB-GENE-091116-19]
86. wnt3a ENSDARG00000058822 5 1 - - - - - - 1.000 - - wingless-type MMTV integration site family, member 3A [Source:ZFIN;Acc:ZDB-GENE-001106-1]
87. zgc:152938 ENSDARG00000102586 97 1 - - - - - - 1.000 - - zgc:152938 [Source:ZFIN;Acc:ZDB-GENE-061013-458]
88. npffr1l3 ENSDARG00000010712 18 1 - - - - - - 1.000 - - neuropeptide FF receptor 1 like 3 [Source:ZFIN;Acc:ZDB-GENE-070424-44]
89. grk7b ENSDARG00000055534 17 1 - - - - - - 1.000 - - G protein-coupled receptor kinase 7b [Source:ZFIN;Acc:ZDB-GENE-030904-3]
90. mtus2 mtus2 22 1 - - - - - - 1.000 - -
91. U1_35 U1_35 1 1 - - - - - - 1.000 - -
92. ubr1 ENSDARG00000060480 71 1 - - - - - - 1.000 - - ubiquitin protein ligase E3 component n-recognin 1 [Source:ZFIN;Acc:ZDB-GENE-091110-2]
93. ppp2r3a ENSDARG00000077722 7 1 - - - - - - 1.000 - - protein phosphatase 2, regulatory subunit B'', alpha [Source:ZFIN;Acc:ZDB-GENE-070912-646]
94. tbx5b ENSDARG00000092060 37 1 - - - - - - 1.000 - - T-box 5b [Source:ZFIN;Acc:ZDB-GENE-060601-2]
95. fscn1b ENSDARG00000037747, ENSDARG00000111370 75 1 - - - - - - 1.000 - - fascin actin-bundling protein 1b [Source:ZFIN;Acc:ZDB-GENE-120507-1]
96. CELA1 CELA1 14 1 - - - - - - 1.000 - -
97. zgc:152977 ENSDARG00000077178 59 1 - - - - - - 1.000 - - zgc:152977 [Source:ZFIN;Acc:ZDB-GENE-060825-353]
98. si:ch1073-181h11.2 ENSDARG00000103883 24 1 - - - - - - 1.000 - - si:ch1073-181h11.2 [Source:ZFIN;Acc:ZDB-GENE-081031-58]
99. U1_38 U1_38 1 1 - - - - - - 1.000 - -
100. BX511021.2 ENSDARG00000097646 5 1 - - - - - - 1.000 - -

There are 758 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA