Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for pitx3

Gene Name Gene ID Reads Annotation
pitx3 ENSDARG00000070069 363 paired-like homeodomain 3 [Source:ZFIN;Acc:ZDB-GENE-041229-4]










Genes with expression patterns similar to pitx3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pitx3 ENSDARG00000070069 363 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 paired-like homeodomain 3 [Source:ZFIN;Acc:ZDB-GENE-041229-4]
2. ucmab ENSDARG00000005485 1808 2.419 0.847 0.780 - - - 0.792 - - - upper zone of growth plate and cartilage matrix associated b [Source:ZFIN;Acc:ZDB-GENE-040426-2368]
3. cyp1b1 ENSDARG00000068934, ENSDARG00000113835 196 2.21 - 0.726 0.750 0.734 - - - - - cytochrome P450, family 1, subfamily B, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030902-1]
4. CU929052.1 CU929052.1 642 2.203 - - 0.717 0.728 0.758 - - - -
5. CU302436.1 ENSDARG00000114500 1619 2.172 0.726 0.723 - - - - 0.723 - - si:dkey-108k21.25 [Source:NCBI gene;Acc:103909883]
6. foxg1a ENSDARG00000070769 928 2.13 - - - 0.712 0.703 - 0.715 - - forkhead box G1a [Source:ZFIN;Acc:ZDB-GENE-990415-267]
7. zgc:112977 ENSDARG00000071741 109 1.727 0.908 0.819 - - - - - - - zgc:112977 [Source:ZFIN;Acc:ZDB-GENE-050327-98]
8. scara3 ENSDARG00000008060 169 1.704 0.908 - - - - 0.796 - - - scavenger receptor class A, member 3 [Source:ZFIN;Acc:ZDB-GENE-041014-317]
9. mkxa ENSDARG00000075450, ENSDARG00000114299 233 1.692 - - - - - 0.731 0.961 - - mohawk homeobox a [Source:ZFIN;Acc:ZDB-GENE-080513-1]
10. six2b ENSDARG00000054878 567 1.689 - 0.883 - - - - 0.806 - - SIX homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-080723-23]
11. supv3l1 ENSDARG00000077728, ENSDARG00000111098 173 1.678 - 0.912 - - - - 0.766 - - SUV3-like helicase [Source:ZFIN;Acc:ZDB-GENE-030131-2838]
12. aglb ENSDARG00000100352 22 1.673 - 0.720 - - - - 0.953 - - amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase b [Source:ZFIN;Acc:ZDB-GENE-050309-54]
13. tgm2l ENSDARG00000093381 218 1.661 - - - - - 0.865 0.796 - - transglutaminase 2, like [Source:ZFIN;Acc:ZDB-GENE-050420-97]
14. si:dkeyp-12a9.5 3058 1.65 - - - - - 0.820 0.830 - - si:dkeyp-12a9.5
15. mylk2 ENSDARG00000031698 135 1.647 - 0.786 - - - - 0.861 - - myosin light chain kinase 2 [Source:ZFIN;Acc:ZDB-GENE-080616-2]
16. sncga ENSDARG00000034423, ENSDARG00000112260 5469 1.647 - - - - - 0.830 0.817 - - synuclein, gamma a [Source:ZFIN;Acc:ZDB-GENE-050417-18]
17. IGSF10 ENSDARG00000077497 317 1.641 - - - - - 0.801 0.840 - - immunoglobulin superfamily, member 10 [Source:ZFIN;Acc:ZDB-GENE-130530-827]
18. CABZ01079764.1 CABZ01079764.1 12103 1.628 - - - - - 0.791 0.837 - -
19. CR388129.1 ENSDARG00000097173 89 1.627 - 0.760 - - - - 0.867 - -
20. sostdc1b ENSDARG00000056021, ENSDARG00000114829 33 1.617 0.705 - - - - - 0.912 - - sclerostin domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-060503-653]
21. FBXO40 FBXO40 194 1.617 - 0.765 - - - - 0.852 - -
22. TMEM182 TMEM182 78 1.613 - - - - - 0.902 0.711 - -
23. sec22bb_1 ENSDARG00000100435 57 1.605 - 0.784 - - - - 0.821 - - SEC22 homolog B, vesicle trafficking protein b [Source:ZFIN;Acc:ZDB-GENE-030131-5488]
24. musk ENSDARG00000098764 438 1.605 - 0.780 - - - - 0.825 - - muscle, skeletal, receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-030131-6458]
25. SLC26A6 ENSDARG00000055835, ENSDARG00000097292 62 1.595 0.705 - - - - - 0.890 - - solute carrier family 26, member 6 [Source:ZFIN;Acc:ZDB-GENE-081105-83]
26. fuom ENSDARG00000039422 82 1.585 - 0.837 - - - - 0.748 - - fucose mutarotase [Source:ZFIN;Acc:ZDB-GENE-030616-618]
27. ahr1b ENSDARG00000023537 44 1.584 - - 0.799 - 0.785 - - - - aryl hydrocarbon receptor 1b [Source:ZFIN;Acc:ZDB-GENE-050922-1]
28. hmx1 ENSDARG00000095651, ENSDARG00000109725, ENSDARG00000111765 151 1.581 - - - - 0.841 - - - 0.740 H6 family homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-080204-54]
29. he1a 48624 1.573 - 0.726 - - - 0.847 - - - hatching enzyme 1a, transcript variant X1
30. cps1 ENSDARG00000020028 67 1.572 - - - 0.747 0.825 - - - - carbamoyl-phosphate synthase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-081105-17]
31. ntla ntla 926 1.555 - - - - - 0.836 0.719 - -
32. epyc ENSDARG00000056950 7783 1.553 - - - - - 0.782 0.771 - - epiphycan [Source:ZFIN;Acc:ZDB-GENE-041008-9]
33. hmx4 ENSDARG00000007941, ENSDARG00000115000, ENSDARG00000116208 447 1.552 - - 0.769 - - - - - 0.783 H6 family homeobox 4 [Source:ZFIN;Acc:ZDB-GENE-060825-142]
34. APH1A APH1A 129 1.547 - - - - - 0.808 0.739 - -
35. si:ch211-274p24.3 si:ch211-274p24.3 72 1.538 - 0.769 0.769 - - - - - -
36. susd5 ENSDARG00000088277 439 1.533 - - - - - 0.782 0.751 - - sushi domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-120215-196]
37. zgc:113278 ENSDARG00000037813 525 1.532 0.712 0.820 - - - - - - - zgc:113278 [Source:ZFIN;Acc:ZDB-GENE-050327-66]
38. hspb7 ENSDARG00000104441 1417 1.527 - 0.764 - - - - 0.763 - - heat shock protein family, member 7 (cardiovascular) [Source:ZFIN;Acc:ZDB-GENE-041010-136]
39. six3b ENSDARG00000054879 2416 1.526 - - 0.771 - - - - - 0.755 SIX homeobox 3b [Source:ZFIN;Acc:ZDB-GENE-990415-128]
40. col15a1b ENSDARG00000061848 398 1.516 0.790 0.726 - - - - - - - collagen, type XV, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-070912-689]
41. ndrg1b ENSDARG00000010420 116 1.515 - 0.807 - - - - - - 0.708 N-myc downstream regulated 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1648]
42. PAQR4 PAQR4 2150 1.515 - - - - - 0.762 0.753 - -
43. CABZ01044297.1 CABZ01044297.1 2015 1.514 - - - - - 0.765 0.749 - -
44. acana ENSDARG00000035891 118 1.514 - - - - - 0.813 0.701 - - aggrecan a [Source:ZFIN;Acc:ZDB-GENE-050208-221]
45. chad ENSDARG00000045071 903 1.507 - - - - - 0.780 0.727 - - chondroadherin [Source:ZFIN;Acc:ZDB-GENE-040426-1130]
46. sema3bl ENSDARG00000007560, ENSDARG00000110211 30 1.499 0.792 - - - - - 0.707 - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3bl [Source:ZFIN;Acc:ZDB-GENE-030131-2956]
47. YRDC ENSDARG00000041428 221 1.497 0.765 - - - - - 0.732 - - yrdC N(6)-threonylcarbamoyltransferase domain containing [Source:ZFIN;Acc:ZDB-GENE-070410-65]
48. col27a1a 1747 1.494 - - - - - 0.788 0.706 - - collagen, type XXVII, alpha 1a
49. mmp23bb ENSDARG00000009825 133 1.486 0.705 - - - - 0.781 - - - matrix metallopeptidase 23bb [Source:ZFIN;Acc:ZDB-GENE-050417-448]
50. fabp11a ENSDARG00000017299 167 1.481 - 0.723 - - 0.758 - - - - fatty acid binding protein 11a [Source:ZFIN;Acc:ZDB-GENE-040912-132]
51. prox2 ENSDARG00000041952, ENSDARG00000117137 112 1.476 - - 0.770 - - - - - 0.706 prospero homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-081003-3]
52. lim2.1 ENSDARG00000068974, ENSDARG00000114525 233 1.47 - - - 0.751 0.719 - - - - lens intrinsic membrane protein 2.1 [Source:ZFIN;Acc:ZDB-GENE-050522-398]
53. cx44.1 cx44.1 799 1.465 - - - 0.743 - - - - 0.722
54. nrl ENSDARG00000100466 41 1.463 - - - - 0.755 - - - 0.708 neural retina leucine zipper [Source:ZFIN;Acc:ZDB-GENE-050729-1]
55. eva1bb ENSDARG00000100698 223 1.457 0.705 0.752 - - - - - - - eva-1 homolog Bb (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-080204-108]
56. plod1a ENSDARG00000059746 3364 1.45 - - - - - 0.720 0.730 - - procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3165]
57. si:ch211-89o9.4 ENSDARG00000093237 153 1.439 - 0.702 - - - - 0.737 - - si:ch211-89o9.4 [Source:ZFIN;Acc:ZDB-GENE-090313-134]
58. mcm5_1 ENSDARG00000019507 10 1.437 0.705 - - - - - - - 0.732 minichromosome maintenance complex component 5 [Source:ZFIN;Acc:ZDB-GENE-021209-1]
59. pik3r5 ENSDARG00000102762 56 1.431 0.705 0.726 - - - - - - - phosphoinositide-3-kinase, regulatory subunit 5 [Source:ZFIN;Acc:ZDB-GENE-030131-2308]
60. CABZ01054394.3 CABZ01054394.3 60 1.428 0.705 - - - - - 0.723 - -
61. si:dkey-188i13.10 ENSDARG00000075151 22 1.427 0.701 0.726 - - - - - - - si:dkey-188i13.10 [Source:ZFIN;Acc:ZDB-GENE-090313-208]
62. mipa ENSDARG00000037285, ENSDARG00000116133 507 1.403 - - - 0.701 - - - - 0.702 major intrinsic protein of lens fiber a [Source:ZFIN;Acc:ZDB-GENE-040801-41]
63. CR352249.1 ENSDARG00000114701 857 0.954 - - - - - - 0.954 - - solute carrier family 38, member 8b [Source:NCBI gene;Acc:795255]
64. iscub ENSDARG00000026582, ENSDARG00000115112 147 0.937 - 0.937 - - - - - - - iron-sulfur cluster assembly enzyme b [Source:ZFIN;Acc:ZDB-GENE-050417-332]
65. zgc:194470 zgc:194470 210 0.932 - - - - - 0.932 - - -
66. gpx3 ENSDARG00000043342 101 0.931 0.931 - - - - - - - - glutathione peroxidase 3 [Source:ZFIN;Acc:ZDB-GENE-070222-3]
67. pclob ENSDARG00000098880 60 0.927 - - - - - 0.927 - - - piccolo presynaptic cytomatrix protein b [Source:ZFIN;Acc:ZDB-GENE-030131-8100]
68. arhgap35 254 0.927 - 0.927 - - - - - - - Rho GTPase activating protein 35b, transcript variant X2
69. dkk1a ENSDARG00000014103 71 0.921 - - - - - - 0.921 - - dickkopf WNT signaling pathway inhibitor 1a [Source:ZFIN;Acc:ZDB-GENE-090313-406]
70. mhc1zaa_1 ENSDARG00000092162 27 0.921 - - - - - - 0.921 - - major histocompatibility complex class I ZAA [Source:ZFIN;Acc:ZDB-GENE-030916-1]
71. DRAXIN ENSDARG00000058256, ENSDARG00000111676 152 0.921 - - - - - - 0.921 - - dorsal inhibitory axon guidance protein [Source:ZFIN;Acc:ZDB-GENE-050913-20]
72. dopey1 438 0.92 - 0.920 - - - - - - - dopey family member 1, transcript variant X4
73. LRRC29 ENSDARG00000076425 284 0.917 - - - - - 0.917 - - - leucine rich repeat containing 29 [Source:ZFIN;Acc:ZDB-GENE-030131-7165]
74. gja3 ENSDARG00000021889, ENSDARG00000116798 49 0.911 - 0.911 - - - - - - - gap junction protein, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-031217-3]
75. PHYH ENSDARG00000086740 15 0.908 0.908 - - - - - - - - phytanoyl-CoA 2-hydroxylase [Source:ZFIN;Acc:ZDB-GENE-050417-361]
76. si:ch211-67f24.7 ENSDARG00000092721, ENSDARG00000092896 11 0.908 0.908 - - - - - - - - si:ch211-67f24.7 [Source:ZFIN;Acc:ZDB-GENE-090313-129]
77. macrod1 ENSDARG00000029609 66 0.908 0.908 - - - - - - - - MACRO domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040912-100]
78. tgm5l ENSDARG00000098837 174 0.908 0.908 - - - - - - - - transglutaminase 5, like [Source:ZFIN;Acc:ZDB-GENE-110411-176]
79. si:dkey-222f2.1 ENSDARG00000043242 192 0.9 - - - - - - 0.900 - - si:dkey-222f2.1 [Source:ZFIN;Acc:ZDB-GENE-050208-726]
80. CABZ01072607.1 ENSDARG00000113761 784 0.899 - 0.899 - - - - - - - dynein cytoplasmic 2 heavy chain 1 [Source:NCBI gene;Acc:100332402]
81. si:ch73-257c13.2 ENSDARG00000074305 197 0.897 - 0.897 - - - - - - - si:ch73-257c13.2 [Source:ZFIN;Acc:ZDB-GENE-081104-269]
82. prr14 ENSDARG00000089232 495 0.896 - 0.896 - - - - - - - proline rich 14 [Source:ZFIN;Acc:ZDB-GENE-030131-3785]
83. kctd12.1 ENSDARG00000069843, ENSDARG00000113802 141 0.895 - - - - - - 0.895 - - potassium channel tetramerisation domain containing 12.1 [Source:ZFIN;Acc:ZDB-GENE-030902-5]
84. PRF1 PRF1 69 0.894 - - - - - 0.894 - - -
85. PEG3_38 PEG3_38 521 0.893 - 0.893 - - - - - - -
86. CU469518.1 CU469518.1 214 0.893 - - - - - 0.893 - - -
87. ddx11 ENSDARG00000011072 325 0.89 - 0.890 - - - - - - - DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11 [Source:ZFIN;Acc:ZDB-GENE-041114-191]
88. NLRC5 ENSDARG00000024631 11 0.89 - - - - - 0.890 - - - NLR family, CARD domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-080429-2]
89. C21H11orf82 C21H11orf82 50 0.89 - - - - - 0.890 - - -
90. IQGAP3 ENSDARG00000098650 5 0.889 - - - - - 0.889 - - - IQ motif containing GTPase activating protein 3 [Source:ZFIN;Acc:ZDB-GENE-160226-1]
91. si:ch211-113a14.19 ENSDARG00000109926, ENSDARG00000111536, ENSDARG00000113481, ENSDARG00000113707, ENSDARG00000115875 22 0.889 - - - - - 0.889 - - - si:ch211-113a14.19 [Source:ZFIN;Acc:ZDB-GENE-121214-198]
92. crp7 ENSDARG00000071456 7 0.889 - - - - - 0.889 - - - C-reactive protein 7 [Source:ZFIN;Acc:ZDB-GENE-070822-13]
93. notum2 ENSDARG00000088411 823 0.886 - - - - - - 0.886 - - notum pectinacetylesterase 2 [Source:ZFIN;Acc:ZDB-GENE-120215-77]
94. AL929286.1 AL929286.1 411 0.885 - 0.885 - - - - - - -
95. HTR1E 103 0.884 - - - - - 0.884 - - - 5-hydroxytryptamine receptor 1E
96. bbs5 ENSDARG00000039827 211 0.883 - 0.883 - - - - - - - Bardet-Biedl syndrome 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1083]
97. SLC3A2_1 SLC3A2_1 358 0.882 - - - - - 0.882 - - -
98. nipa1 ENSDARG00000055917 132 0.882 - 0.882 - - - - - - - NIPA magnesium transporter 1 [Source:ZFIN;Acc:ZDB-GENE-041010-164]
99. USP6 USP6 613 0.881 - 0.881 - - - - - - -
100. CCDC88A CCDC88A 90 0.881 - 0.881 - - - - - - -

There are 945 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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