Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for pitx1

Gene Name Gene ID Reads Annotation
pitx1 ENSDARG00000116608 1278 paired-like homeodomain 1 [Source:ZFIN;Acc:ZDB-GENE-060421-3623]










Genes with expression patterns similar to pitx1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pitx1 ENSDARG00000116608 1278 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 paired-like homeodomain 1 [Source:ZFIN;Acc:ZDB-GENE-060421-3623]
2. suclg2 ENSDARG00000044914 7950 1.748 - - - - - 0.871 0.877 - - succinate-CoA ligase, GDP-forming, beta subunit [Source:ZFIN;Acc:ZDB-GENE-030114-3]
3. NUAK1 NUAK1 1074 1.683 - - - 0.801 - 0.882 - - -
4. atp6v0ca ENSDARG00000057853 23277 1.673 - - - - - 0.850 0.823 - - ATPase H+ transporting V0 subunit ca [Source:ZFIN;Acc:ZDB-GENE-020419-23]
5. cldnh ENSDARG00000069503 2410 1.661 0.881 - - - - - 0.780 - - claudin h [Source:ZFIN;Acc:ZDB-GENE-010328-8]
6. rpe ENSDARG00000005251, ENSDARG00000117024 3865 1.653 - - - - - 0.902 0.751 - - ribulose-5-phosphate-3-epimerase [Source:ZFIN;Acc:ZDB-GENE-030131-6837]
7. mafbb ENSDARG00000070542, ENSDARG00000099120 1317 1.64 - 0.734 - - - 0.906 - - - v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog Bb [Source:ZFIN;Acc:ZDB-GENE-010605-4]
8. pikfyve ENSDARG00000056112 1583 1.638 - - - - - 0.848 0.790 - - phosphoinositide kinase, FYVE finger containing [Source:ZFIN;Acc:ZDB-GENE-030131-9636]
9. PCOLCE_1 PCOLCE_1 2148 1.633 0.741 - - - - 0.892 - - -
10. zgc:193711 ENSDARG00000101901 503 1.632 - - - - - 0.900 0.732 - - zgc:193711 [Source:ZFIN;Acc:ZDB-GENE-081022-34]
11. EPHA2 EPHA2 867 1.626 - - - - - 0.903 0.723 - -
12. tcn2l tcn2l 2428 1.622 - - - - - 0.906 0.716 - -
13. dgat2 ENSDARG00000018846 5032 1.619 - - - - - 0.820 0.799 - - diacylglycerol O-acyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-050913-15]
14. and2 ENSDARG00000079302 20939 1.618 - - - - - 0.773 0.845 - - actinodin2 [Source:ZFIN;Acc:ZDB-GENE-041105-2]
15. BX004812.1 ENSDARG00000096968 5467 1.617 - - - - - 0.854 0.763 - -
16. tpte ENSDARG00000056985 724 1.615 - - - - - 0.845 0.770 - - transmembrane phosphatase with tensin homology [Source:ZFIN;Acc:ZDB-GENE-030131-5503]
17. cpvl ENSDARG00000056480 2115 1.606 - - - - - 0.851 0.755 - - carboxypeptidase, vitellogenic-like [Source:ZFIN;Acc:ZDB-GENE-031219-2]
18. nos1apa ENSDARG00000078725, ENSDARG00000105071 3815 1.601 0.756 - - - - - 0.845 - - nitric oxide synthase 1 (neuronal) adaptor protein a [Source:ZFIN;Acc:ZDB-GENE-081024-1]
19. GALNT3 ENSDARG00000108649 356 1.596 - - - 0.811 - 0.785 - - - polypeptide N-acetylgalactosaminyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:4125]
20. nrp2a_1 ENSDARG00000096546 3358 1.595 - - - - - 0.826 0.769 - - neuropilin 2a [Source:ZFIN;Acc:ZDB-GENE-040611-2]
21. lipf ENSDARG00000018529 1849 1.59 0.770 - - - - 0.820 - - - lipase, gastric [Source:ZFIN;Acc:ZDB-GENE-040426-2737]
22. spns1 ENSDARG00000011925, ENSDARG00000111727 3126 1.577 - - - - - 0.849 0.728 - - spinster homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-020228-1]
23. cst3 ENSDARG00000007795 13753 1.577 - - - - - 0.874 0.703 - - cystatin C (amyloid angiopathy and cerebral hemorrhage) [Source:ZFIN;Acc:ZDB-GENE-030131-373]
24. lgals2b ENSDARG00000038153 2196 1.574 - - - - - 0.825 0.749 - - lectin, galactoside-binding, soluble, 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1590]
25. fam114a1 ENSDARG00000008287, ENSDARG00000116401 949 1.574 - 0.740 - 0.834 - - - - - family with sequence similarity 114, member A1 [Source:ZFIN;Acc:ZDB-GENE-070410-52]
26. dpydb ENSDARG00000010267 831 1.563 - - - - - 0.807 0.756 - - dihydropyrimidine dehydrogenase b [Source:ZFIN;Acc:ZDB-GENE-040426-2459]
27. ctsh ENSDARG00000041108 2873 1.563 - - - - - 0.848 0.715 - - cathepsin H [Source:ZFIN;Acc:ZDB-GENE-030131-3539]
28. SSTR5 ENSDARG00000101655 351 1.559 - - - - - 0.783 0.776 - - somatostatin receptor 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2502]
29. CNST CNST 540 1.559 - - - 0.806 - - - 0.753 -
30. amdhd2 ENSDARG00000100376 656 1.557 - - - - - 0.806 0.751 - - amidohydrolase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1871]
31. palm3 ENSDARG00000071215 1776 1.554 0.805 - - - - - 0.749 - - paralemmin 3 [Source:ZFIN;Acc:ZDB-GENE-061215-74]
32. tmem110l ENSDARG00000045518 1783 1.553 - - - - - 0.800 0.753 - - transmembrane protein 110, like [Source:ZFIN;Acc:ZDB-GENE-040426-912]
33. CHDH ENSDARG00000100304 2257 1.55 - - - - - 0.781 0.769 - - choline dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-120111-1]
34. ca15a ENSDARG00000015654 2657 1.543 - - - - - 0.822 0.721 - - carbonic anhydrase XVa [Source:ZFIN;Acc:ZDB-GENE-070424-7]
35. CABZ01045212.1 ENSDARG00000087525 1460 1.54 - - - - - 0.784 0.756 - - major facilitator superfamily domain-containing protein 8-like [Source:NCBI gene;Acc:564731]
36. gpr137 ENSDARG00000037244 801 1.539 - - - - - - 0.744 0.795 - G protein-coupled receptor 137 [Source:ZFIN;Acc:ZDB-GENE-040718-443]
37. slc43a2a ENSDARG00000036848 6798 1.537 0.822 - - - - 0.715 - - - solute carrier family 43 (amino acid system L transporter), member 2a [Source:ZFIN;Acc:ZDB-GENE-040426-964]
38. zgc:152830 ENSDARG00000079932 12194 1.532 - - - - - 0.818 0.714 - - zgc:152830 [Source:ZFIN;Acc:ZDB-GENE-090312-55]
39. fam83h fam83h 1448 1.532 0.788 - - - - 0.744 - - -
40. ccbl1 702 1.531 - - - 0.759 - - 0.772 - - cysteine conjugate-beta lyase, cytoplasmic, transcript variant X1
41. ovol1 1037 1.529 - - - - - - 0.749 0.780 - ovo-like zinc finger 1, transcript variant X1
42. esrp1 ENSDARG00000011245 2097 1.524 - - - - - 0.730 0.794 - - epithelial splicing regulatory protein 1 [Source:ZFIN;Acc:ZDB-GENE-070112-1732]
43. gnmt ENSDARG00000006840 2422 1.524 - - - - - 0.754 0.770 - - glycine N-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-040227-1]
44. tmx2b ENSDARG00000007786 3151 1.52 0.777 - - - - - 0.743 - - thioredoxin-related transmembrane protein 2b [Source:ZFIN;Acc:ZDB-GENE-040625-105]
45. nt5c3a ENSDARG00000058597 14299 1.519 - - - - - 0.805 0.714 - - 5'-nucleotidase, cytosolic IIIA [Source:ZFIN;Acc:ZDB-GENE-030131-439]
46. CLEC19A ENSDARG00000113127, ENSDARG00000115545 486 1.517 0.719 - - - - 0.798 - - - C-type lectin domain containing 19A [Source:ZFIN;Acc:ZDB-GENE-080917-46]
47. f10 ENSDARG00000088581 4968 1.515 - - - - - 0.799 0.716 - - coagulation factor X [Source:ZFIN;Acc:ZDB-GENE-021206-9]
48. mtm1 ENSDARG00000037560 1086 1.515 0.736 - - - - 0.779 - - - myotubularin 1 [Source:ZFIN;Acc:ZDB-GENE-051113-128]
49. akr1a1a ENSDARG00000035257, ENSDARG00000109404 548 1.514 - - - - - 0.740 0.774 - - aldo-keto reductase family 1, member A1a (aldehyde reductase) [Source:ZFIN;Acc:ZDB-GENE-040808-44]
50. CD68 CD68 4599 1.514 - - - - - 0.813 0.701 - -
51. KRT18 ENSDARG00000018404, ENSDARG00000109528 6022 1.505 - - - - - 0.769 0.736 - - keratin 18 [Source:ZFIN;Acc:ZDB-GENE-030411-6]
52. g6pca.1 ENSDARG00000031616 401 1.505 - - - - - 0.793 0.712 - - glucose-6-phosphatase a, catalytic subunit, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-031001-4]
53. spata13 ENSDARG00000062837 5330 1.504 - - - - - 0.762 0.742 - - spermatogenesis associated 13 [Source:ZFIN;Acc:ZDB-GENE-091116-25]
54. slc3a2a ENSDARG00000036427, ENSDARG00000112231 2967 1.503 - - - - - - 0.714 0.789 - solute carrier family 3 (amino acid transporter heavy chain), member 2a [Source:ZFIN;Acc:ZDB-GENE-000831-3]
55. PRSS16 ENSDARG00000076602 963 1.502 - - - - - 0.707 0.795 - - serine protease 16 [Source:ZFIN;Acc:ZDB-GENE-070112-732]
56. furina ENSDARG00000062909, ENSDARG00000117158 6313 1.498 - - - - - 0.758 0.740 - - furin (paired basic amino acid cleaving enzyme) a [Source:ZFIN;Acc:ZDB-GENE-040901-1]
57. CU694219.1 CU694219.1 699 1.486 - - - - - 0.786 0.700 - -
58. pcbd1 ENSDARG00000031981 3373 1.486 - - - - - 0.774 0.712 - - pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha [Source:ZFIN;Acc:ZDB-GENE-040426-1787]
59. hexb ENSDARG00000034368 3505 1.486 - - - - - 0.777 0.709 - - hexosaminidase B (beta polypeptide) [Source:ZFIN;Acc:ZDB-GENE-030131-2333]
60. arntl1a ENSDARG00000006791 550 1.481 - - - - - 0.700 - 0.781 - aryl hydrocarbon receptor nuclear translocator-like 1a [Source:ZFIN;Acc:ZDB-GENE-000509-1]
61. rps6ka3a ENSDARG00000035556, ENSDARG00000116641 3608 1.479 - - - - - 0.772 0.707 - - ribosomal protein S6 kinase a, polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-030219-119]
62. abi3bp 2170 1.479 - - - 0.756 - - 0.723 - - ABI family member 3 binding protein, transcript variant X3
63. rnf121 ENSDARG00000060282 1809 1.479 - - - 0.734 - 0.745 - - - ring finger protein 121 [Source:ZFIN;Acc:ZDB-GENE-050809-3]
64. gdap2 ENSDARG00000021569 1013 1.473 - - - 0.738 - - - 0.735 - ganglioside induced differentiation associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-040912-31]
65. sult2st1_1 ENSDARG00000033170 3074 1.472 - - - - - 0.771 0.701 - - sulfotransferase family 2, cytosolic sulfotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030219-114]
66. chmp5b ENSDARG00000103718 1608 1.471 - 0.719 - - - - 0.752 - - charged multivesicular body protein 5b [Source:ZFIN;Acc:ZDB-GENE-040426-1374]
67. lamp2 ENSDARG00000014914 5035 1.465 - - - - - 0.764 0.701 - - lysosomal-associated membrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-030729-9]
68. slc26a5 ENSDARG00000022424 976 1.464 - - - - - 0.718 0.746 - - solute carrier family 26 (anion exchanger), member 5 [Source:ZFIN;Acc:ZDB-GENE-030131-1566]
69. aldh2.2 ENSDARG00000028087 303 1.462 - - - 0.742 - - 0.720 - - aldehyde dehydrogenase 2 family member, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-030326-5]
70. btr12 ENSDARG00000051809 1804 1.46 0.705 - - - - - 0.755 - - bloodthirsty-related gene family, member 12 [Source:ZFIN;Acc:ZDB-GENE-060929-548]
71. ctsla ENSDARG00000007836 67814 1.459 - - - - - 0.751 0.708 - - cathepsin La [Source:ZFIN;Acc:ZDB-GENE-030131-106]
72. MPC2 ENSDARG00000024478 4194 1.447 - - - - - 0.735 0.712 - - mitochondrial pyruvate carrier 2 [Source:ZFIN;Acc:ZDB-GENE-030131-330]
73. ugt1b4 ENSDARG00000097024 1848 1.443 - - - - - 0.740 0.703 - - UDP glucuronosyltransferase 1 family, polypeptide B4 [Source:ZFIN;Acc:ZDB-GENE-080227-13]
74. arhgdig ENSDARG00000004034 10368 1.443 - 0.736 - - - - 0.707 - - Rho GDP dissociation inhibitor (GDI) gamma [Source:ZFIN;Acc:ZDB-GENE-040426-1493]
75. dhdhl ENSDARG00000028336 844 1.442 - - - - - 0.721 0.721 - - dihydrodiol dehydrogenase (dimeric), like [Source:ZFIN;Acc:ZDB-GENE-040426-2180]
76. sidt2 ENSDARG00000045976 1997 1.439 - - - - - 0.709 0.730 - - SID1 transmembrane family, member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7356]
77. ndrg1a ENSDARG00000032849 2406 1.438 0.720 - - - - 0.718 - - - N-myc downstream regulated 1a [Source:ZFIN;Acc:ZDB-GENE-030826-34]
78. im:7148400 im:7148400 787 1.438 - - - - - 0.727 0.711 - -
79. rhbg ENSDARG00000009018 1131 1.43 0.715 - - - - - 0.715 - - Rh family, B glycoprotein (gene/pseudogene) [Source:ZFIN;Acc:ZDB-GENE-030131-9542]
80. arg2 ENSDARG00000039269 571 1.423 - - - - - 0.706 0.717 - - arginase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1334]
81. cald1l cald1l 4115 1.417 - - - - - 0.712 0.705 - -
82. RABGAP1L ENSDARG00000061757 1967 1.411 - 0.706 - - - - 0.705 - - RAB GTPase activating protein 1-like [Source:ZFIN;Acc:ZDB-GENE-050208-389]
83. bckdhbl ENSDARG00000093569 2166 0.939 - - - - - 0.939 - - - branched chain keto acid dehydrogenase E1, beta polypeptide, like [Source:ZFIN;Acc:ZDB-GENE-060830-1]
84. sgk2a ENSDARG00000063370 421 0.934 - - - - - 0.934 - - - serum/glucocorticoid regulated kinase 2a [Source:ZFIN;Acc:ZDB-GENE-030131-9632]
85. erbb3a ENSDARG00000006202 903 0.932 - - - - - 0.932 - - - erb-b2 receptor tyrosine kinase 3a [Source:ZFIN;Acc:ZDB-GENE-030916-3]
86. ftcd ENSDARG00000007421 2228 0.924 - - - - - 0.924 - - - formimidoyltransferase cyclodeaminase [Source:ZFIN;Acc:ZDB-GENE-030131-9643]
87. necap2 ENSDARG00000046002 4372 0.918 - 0.918 - - - - - - - NECAP endocytosis associated 2 [Source:ZFIN;Acc:ZDB-GENE-050522-67]
88. hoga1 ENSDARG00000018944 800 0.91 - - - - - - 0.910 - - 4-hydroxy-2-oxoglutarate aldolase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2242]
89. fabp1b.1 ENSDARG00000059227 5670 0.908 - - - - - 0.908 - - - fatty acid binding protein 1b, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050522-96]
90. zgc:64085 zgc:64085 955 0.9 - - - - - 0.900 - - -
91. adipor2 ENSDARG00000101849 3156 0.9 - - - - - - 0.900 - - adiponectin receptor 2 [Source:ZFIN;Acc:ZDB-GENE-041210-60]
92. serpina1l ENSDARG00000090850 10625 0.896 - - - - - 0.896 - - - serine (or cysteine) proteinase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1, like [Source:ZFIN;Acc:ZDB-GENE-040721-3]
93. tspan33 tspan33 453 0.886 - - - - - - 0.886 - -
94. ttyh2l ENSDARG00000010727 204 0.886 - - - - - 0.886 - - - tweety homolog 2, like [Source:ZFIN;Acc:ZDB-GENE-040426-2394]
95. ivns1abpa ENSDARG00000031100 3806 0.886 - - - - - 0.886 - - - influenza virus NS1A binding protein a [Source:ZFIN;Acc:ZDB-GENE-031222-2]
96. CU928070.1 CU928070.1 1152 0.885 - - - - - 0.885 - - -
97. cry3_1 cry3_1 3347 0.885 - - - - - 0.885 - - -
98. cad ENSDARG00000041895 4977 0.878 - - - - - 0.878 - - - carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase [Source:ZFIN;Acc:ZDB-GENE-021030-4]
99. CPT1A CPT1A 4004 0.876 - - - - - 0.876 - - -
100. slc35f6 ENSDARG00000016745, ENSDARG00000114790 3823 0.875 - - - - - 0.875 - - - solute carrier family 35, member F6 [Source:ZFIN;Acc:ZDB-GENE-040718-297]

There are 960 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA