Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for pitpnab

Gene Name Gene ID Reads Annotation
pitpnab ENSDARG00000044091 306 phosphatidylinositol transfer protein, alpha b [Source:ZFIN;Acc:ZDB-GENE-110408-51]










Genes with expression patterns similar to pitpnab

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pitpnab ENSDARG00000044091 306 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 phosphatidylinositol transfer protein, alpha b [Source:ZFIN;Acc:ZDB-GENE-110408-51]
2. rab3aa ENSDARG00000056347, ENSDARG00000114357 160 2.301 0.728 0.797 - - - 0.776 - - - RAB3A, member RAS oncogene family, a [Source:ZFIN;Acc:ZDB-GENE-040801-2]
3. ankrd46b ENSDARG00000015780 213 2.289 - - - - - 0.713 0.744 0.832 - ankyrin repeat domain 46b [Source:ZFIN;Acc:ZDB-GENE-050114-7]
4. scn1bb ENSDARG00000105003 239 1.72 0.840 - - - - 0.880 - - - sodium channel, voltage-gated, type I, beta b [Source:ZFIN;Acc:ZDB-GENE-090408-1]
5. plxnb3 ENSDARG00000032990 98 1.718 - 0.849 - - - 0.869 - - - plexin B3 [Source:ZFIN;Acc:ZDB-GENE-081104-53]
6. rab11bb ENSDARG00000090086 43 1.683 - 0.756 - - - 0.927 - - - RAB11B, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-040718-293]
7. rap2ip rap2ip 681 1.659 0.886 - - - - - - 0.773 -
8. CR848045.1 CR848045.1 459 1.654 0.862 - - - - 0.792 - - -
9. grm4 ENSDARG00000040156 342 1.652 - 0.777 - - - - 0.875 - - glutamate receptor, metabotropic 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5781]
10. TUSC3 ENSDARG00000078854 1021 1.641 - - - - - 0.895 - 0.746 - tumor suppressor candidate 3 [Source:ZFIN;Acc:ZDB-GENE-050522-381]
11. csdc2a ENSDARG00000041323, ENSDARG00000115932 490 1.636 - - - - - 0.827 0.809 - - cold shock domain containing C2, RNA binding a [Source:ZFIN;Acc:ZDB-GENE-040718-442]
12. odz4 odz4 822 1.602 - 0.781 - - - 0.821 - - -
13. CR847998.1 ENSDARG00000104784 518 1.6 0.854 - - - - 0.746 - - -
14. dync1i1 ENSDARG00000060948 554 1.6 0.865 - - - - 0.735 - - - dynein, cytoplasmic 1, intermediate chain 1 [Source:ZFIN;Acc:ZDB-GENE-061215-62]
15. pcnxl2 610 1.598 - 0.831 - - - - - 0.767 - pecanex-like 2 (Drosophila), transcript variant X2
16. polr3c ENSDARG00000057562 123 1.597 - - - - - 0.836 - 0.761 - polymerase (RNA) III (DNA directed) polypeptide C [Source:ZFIN;Acc:ZDB-GENE-040426-992]
17. celf4 ENSDARG00000070045 1537 1.596 0.786 - - - - 0.810 - - - CUGBP, Elav-like family member 4 [Source:ZFIN;Acc:ZDB-GENE-040718-300]
18. rab42a ENSDARG00000034215 692 1.594 - - - - - 0.784 - 0.810 - RAB42, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-040426-1983]
19. fsd1 ENSDARG00000062017 207 1.588 0.762 - - - - 0.826 - - - fibronectin type III and SPRY domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060503-218]
20. BX511266.1 BX511266.1 21 1.576 0.800 - - - - 0.776 - - -
21. RAB39B RAB39B 482 1.573 - - - - - 0.751 - 0.822 -
22. ppfia4 ENSDARG00000053205 276 1.567 0.841 - - - - 0.726 - - - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4 [Source:ZFIN;Acc:ZDB-GENE-070720-14]
23. SLC22A23_1 SLC22A23_1 308 1.563 - 0.823 - - - 0.740 - - -
24. TUBB8P7 TUBB8P7 1353 1.557 0.782 - - - - 0.775 - - -
25. KCNB2 ENSDARG00000088842 35 1.551 - - - - - 0.705 0.846 - - potassium voltage-gated channel subfamily B member 2 [Source:HGNC Symbol;Acc:HGNC:6232]
26. galnt13 ENSDARG00000099227 1059 1.549 - - - - - 0.802 - 0.747 - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13 [Source:ZFIN;Acc:ZDB-GENE-091204-444]
27. vgf ENSDARG00000105529 247 1.548 0.826 - - - - 0.722 - - - VGF nerve growth factor inducible [Source:ZFIN;Acc:ZDB-GENE-121009-2]
28. PPP2R2B PPP2R2B 257 1.546 0.710 - - - - - - 0.836 -
29. snap25b ENSDARG00000058117 469 1.545 - - - - - 0.725 - 0.820 - synaptosomal-associated protein, 25b [Source:ZFIN;Acc:ZDB-GENE-980526-392]
30. sox1b ENSDARG00000008131 379 1.543 - - - - - 0.725 - 0.818 - SRY (sex determining region Y)-box 1b [Source:ZFIN;Acc:ZDB-GENE-060322-5]
31. desi1a ENSDARG00000033140 92 1.542 - 0.748 - - - - 0.794 - - desumoylating isopeptidase 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1657]
32. csnk1e ENSDARG00000045150, ENSDARG00000112948 288 1.542 - - - - - 0.818 0.724 - - casein kinase 1, epsilon [Source:ZFIN;Acc:ZDB-GENE-030131-7873]
33. ric8a ENSDARG00000007247 229 1.54 - - - - - - 0.761 0.779 - RIC8 guanine nucleotide exchange factor A [Source:ZFIN;Acc:ZDB-GENE-040927-18]
34. s1pr1 ENSDARG00000042690, ENSDARG00000113842, ENSDARG00000116038 2510 1.534 0.707 - - - - 0.827 - - - sphingosine-1-phosphate receptor 1 [Source:ZFIN;Acc:ZDB-GENE-001228-2]
35. gabrg2 ENSDARG00000053665 434 1.53 0.829 - - - - 0.701 - - - gamma-aminobutyric acid (GABA) A receptor, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-091118-65]
36. diras1a ENSDARG00000028066 126 1.529 0.771 - - - - 0.758 - - - DIRAS family, GTP-binding RAS-like 1a [Source:ZFIN;Acc:ZDB-GENE-030131-5788]
37. slc12a5b ENSDARG00000078187 329 1.529 0.763 - - - - 0.766 - - - solute carrier family 12 (potassium/chloride transporter), member 5b [Source:ZFIN;Acc:ZDB-GENE-080707-1]
38. CABZ01111990.1 CABZ01111990.1 4374 1.528 0.804 - - - - 0.724 - - -
39. stxbp1b ENSDARG00000056036, ENSDARG00000112938 84 1.528 - 0.754 - - - - - 0.774 - syntaxin binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-060531-166]
40. si:dkey-77f17.1 si:dkey-77f17.1 83 1.524 0.705 - - - - 0.819 - - -
41. sdcbp ENSDARG00000030097 196 1.52 0.779 - - - - - 0.741 - - syndecan binding protein (syntenin) [Source:ZFIN;Acc:ZDB-GENE-081104-57]
42. adar ENSDARG00000012389 520 1.52 - - - - - - 0.731 0.789 - adenosine deaminase, RNA-specific [Source:ZFIN;Acc:ZDB-GENE-000616-5]
43. LRRC4C ENSDARG00000113411 36 1.519 - - - - - 0.802 - 0.717 - leucine rich repeat containing 4C [Source:ZFIN;Acc:ZDB-GENE-050522-533]
44. polh ENSDARG00000070231, ENSDARG00000111719 154 1.513 0.783 - - - - - - 0.730 - polymerase (DNA directed), eta [Source:ZFIN;Acc:ZDB-GENE-060421-4949]
45. dbx1b ENSDARG00000001859, ENSDARG00000113468 810 1.508 - - - - - 0.793 0.715 - - developing brain homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-000128-11]
46. syt3 ENSDARG00000075830 430 1.502 0.710 - - - - 0.792 - - - synaptotagmin III [Source:ZFIN;Acc:ZDB-GENE-090601-1]
47. U3_2 U3_2 669 1.5 0.788 - - - - - - 0.712 -
48. zgc:153615 ENSDARG00000038981 105 1.495 - - - - - 0.772 0.723 - - zgc:153615 [Source:ZFIN;Acc:ZDB-GENE-061110-79]
49. zgc:114119 ENSDARG00000098992 1090 1.49 - - - - - 0.762 - 0.728 - zgc:114119 [Source:ZFIN;Acc:ZDB-GENE-050913-56]
50. ANK1_1 ANK1_1 507 1.486 0.759 - - - - 0.727 - - -
51. dab1b ENSDARG00000003290 7 1.484 0.708 - - - - 0.776 - - - Dab, reelin signal transducer, homolog 1b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-060421-7958]
52. fam188a 275 1.483 - - - - - 0.757 - 0.726 - family with sequence similarity 188, member A
53. hnrnpr ENSDARG00000014569 3423 1.478 - - - - - - 0.755 0.723 - heterogeneous nuclear ribonucleoprotein R [Source:ZFIN;Acc:ZDB-GENE-040426-2766]
54. tmie ENSDARG00000069423 305 1.477 0.711 - - - - 0.766 - - - transmembrane inner ear [Source:ZFIN;Acc:ZDB-GENE-061207-9]
55. ccdc92 ENSDARG00000041750, ENSDARG00000115475 283 1.474 - - - - - 0.732 0.742 - - coiled-coil domain containing 92 [Source:ZFIN;Acc:ZDB-GENE-051113-120]
56. odf3l2 36 1.473 - 0.754 - - - 0.719 - - - outer dense fiber of sperm tails 3-like 2
57. GPR153 ENSDARG00000087601 48 1.464 0.708 0.756 - - - - - - - G protein-coupled receptor 153 [Source:ZFIN;Acc:ZDB-GENE-050823-7]
58. gprc5bb ENSDARG00000075141 119 1.451 - - - - - 0.706 - 0.745 - G protein-coupled receptor, class C, group 5, member Bb [Source:ZFIN;Acc:ZDB-GENE-090313-75]
59. PRKAR2B ENSDARG00000036446 812 1.451 0.727 - - - - 0.724 - - - protein kinase cAMP-dependent type II regulatory subunit beta [Source:HGNC Symbol;Acc:HGNC:9392]
60. rusc1 ENSDARG00000078125 617 1.449 0.716 - - - - 0.733 - - - RUN and SH3 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100922-274]
61. GRIN3A ENSDARG00000075802 27 1.442 - - - - - 0.726 0.716 - - glutamate receptor, ionotropic, N-methyl-D-aspartate 3A [Source:ZFIN;Acc:ZDB-GENE-130530-780]
62. scrt1a ENSDARG00000100821 2687 1.429 0.703 - - - - 0.726 - - - scratch family zinc finger 1a [Source:ZFIN;Acc:ZDB-GENE-080219-30]
63. gria1a ENSDARG00000021352, ENSDARG00000111182, ENSDARG00000111756, ENSDARG00000112683 169 0.931 - - - - - 0.931 - - - glutamate receptor, ionotropic, AMPA 1a [Source:ZFIN;Acc:ZDB-GENE-020125-1]
64. med18 ENSDARG00000041237 247 0.928 - 0.928 - - - - - - - mediator of RNA polymerase II transcription, subunit 18 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1276]
65. try 21 0.919 0.919 - - - - - - - - trypsin
66. pvalb6 ENSDARG00000009311, ENSDARG00000113947 248 0.919 0.919 - - - - - - - - parvalbumin 6 [Source:ZFIN;Acc:ZDB-GENE-040912-95]
67. KCNJ6 ENSDARG00000058985 71 0.919 0.919 - - - - - - - - potassium voltage-gated channel subfamily J member 6 [Source:HGNC Symbol;Acc:HGNC:6267]
68. sec22bb_1 ENSDARG00000100435 57 0.919 0.919 - - - - - - - - SEC22 homolog B, vesicle trafficking protein b [Source:ZFIN;Acc:ZDB-GENE-030131-5488]
69. CR387997.1 CR387997.1 190 0.914 - 0.914 - - - - - - -
70. CAMSAP3 ENSDARG00000059475 263 0.912 - - - - - 0.912 - - - calmodulin regulated spectrin-associated protein family, member 3 [Source:ZFIN;Acc:ZDB-GENE-060503-811]
71. st6galnac3 ENSDARG00000058473 131 0.9 - 0.900 - - - - - - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1329]
72. zgc:73228 zgc:73228 97 0.899 - - - - - 0.899 - - -
73. si:ch211-216l23.2 ENSDARG00000069122, ENSDARG00000115838 1365 0.898 - 0.898 - - - - - - - si:ch211-216l23.2 [Source:ZFIN;Acc:ZDB-GENE-030131-3806]
74. gpr56 gpr56 523 0.893 - - - - - 0.893 - - -
75. mettl14 ENSDARG00000070278, ENSDARG00000112383 278 0.888 - - - - - 0.888 - - - methyltransferase like 14 [Source:ZFIN;Acc:ZDB-GENE-040426-2328]
76. ADAMTSL3 ENSDARG00000027903 278 0.881 - 0.881 - - - - - - - ADAMTS-like 3 [Source:ZFIN;Acc:ZDB-GENE-121030-8]
77. dld ENSDARG00000020219 4928 0.881 0.881 - - - - - - - - deltaD [Source:ZFIN;Acc:ZDB-GENE-990415-47]
78. PROCA1 ENSDARG00000069823 343 0.881 0.881 - - - - - - - - protein interacting with cyclin A1 [Source:ZFIN;Acc:ZDB-GENE-110418-1]
79. isl1 ENSDARG00000004023 981 0.88 0.880 - - - - - - - - ISL LIM homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-112]
80. sgsm3 ENSDARG00000019038 352 0.879 - - - - - 0.879 - - - small G protein signaling modulator 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2635]
81. TUB ENSDARG00000062165, ENSDARG00000111083 871 0.879 - - - - - 0.879 - - - tubby bipartite transcription factor [Source:ZFIN;Acc:ZDB-GENE-121009-1]
82. dffb ENSDARG00000009748 204 0.879 - 0.879 - - - - - - - DNA fragmentation factor, beta polypeptide (caspase-activated DNase) [Source:ZFIN;Acc:ZDB-GENE-030826-4]
83. tbc1d25 ENSDARG00000075333 126 0.877 - - - - - 0.877 - - - TBC1 domain family, member 25 [Source:ZFIN;Acc:ZDB-GENE-041111-25]
84. si:ch211-102c2.4 ENSDARG00000079387 101 0.877 - 0.877 - - - - - - - si:ch211-102c2.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8862]
85. C1H20orf27 C1H20orf27 69 0.876 - - - - - 0.876 - - -
86. pip5k1ab ENSDARG00000024642 1988 0.875 0.875 - - - - - - - - phosphatidylinositol-4-phosphate 5-kinase, type I, alpha, b [Source:ZFIN;Acc:ZDB-GENE-041111-123]
87. wdr3 ENSDARG00000011079 1403 0.874 - - - - - - - 0.874 - WD repeat domain 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9830]
88. si:dkey-253a1.2 si:dkey-253a1.2 52 0.873 - - - - - 0.873 - - -
89. nrg2b ENSDARG00000086585 100 0.873 - - - - - 0.873 - - - neuregulin 2b [Source:ZFIN;Acc:ZDB-GENE-090205-2]
90. nme7 ENSDARG00000056193 291 0.873 - 0.873 - - - - - - - NME/NM23 family member 7 [Source:ZFIN;Acc:ZDB-GENE-000210-35]
91. lrriq1 ENSDARG00000093781 83 0.872 - 0.872 - - - - - - - leucine-rich repeats and IQ motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-050419-235]
92. prok1 ENSDARG00000073948, ENSDARG00000114411 26 0.871 - - - - - 0.871 - - - prokineticin 1 [Source:ZFIN;Acc:ZDB-GENE-070928-34]
93. CHL1 CHL1 1553 0.869 0.869 - - - - - - - -
94. FP102892.2 FP102892.2 809 0.868 - - - - - 0.868 - - -
95. BX957337.1 BX957337.1 1685 0.868 0.868 - - - - - - - -
96. SYNDIG1 ENSDARG00000100751 165 0.867 - - - - - 0.867 - - - synapse differentiation inducing 1 [Source:HGNC Symbol;Acc:HGNC:15885]
97. porcn ENSDARG00000052558, ENSDARG00000111556 110 0.867 - - - - - 0.867 - - - porcupine O-acyltransferase [Source:ZFIN;Acc:ZDB-GENE-081105-87]
98. fam105ba fam105ba 93 0.865 - - - - - 0.865 - - -
99. CABZ01087514.1 ENSDARG00000090861 245 0.865 - - - - - 0.865 - - - peroxisomal membrane protein PMP34-like [Source:NCBI gene;Acc:566378]
100. atp6ap1a ENSDARG00000041417 898 0.863 0.863 - - - - - - - - ATPase H+ transporting accessory protein 1a [Source:ZFIN;Acc:ZDB-GENE-090312-136]

There are 1125 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA