Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for pin4

Gene Name Gene ID Reads Annotation
pin4 ENSDARG00000004527 3598 protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin) [Source:ZFIN;Acc:ZDB-GENE-050522-117]










Genes with expression patterns similar to pin4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pin4 ENSDARG00000004527 3598 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin) [Source:ZFIN;Acc:ZDB-GENE-050522-117]
2. BCKDHB ENSDARG00000014676 3725 2.324 0.748 0.813 - - - - 0.763 - - branched chain keto acid dehydrogenase E1, beta polypeptide [Source:ZFIN;Acc:ZDB-GENE-030124-2]
3. emc1 ENSDARG00000057255 3582 2.145 - 0.714 - - - - 0.701 - 0.730 ER membrane protein complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-060810-98]
4. pes ENSDARG00000018902 3286 1.668 0.787 0.881 - - - - - - - pescadillo [Source:ZFIN;Acc:ZDB-GENE-990415-206]
5. lap3 ENSDARG00000061981 1188 1.637 - 0.862 - - - - 0.775 - - leucine aminopeptidase 3 [Source:ZFIN;Acc:ZDB-GENE-060719-1]
6. cds2 ENSDARG00000035577 1475 1.611 - 0.823 - - - - 0.788 - - CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2 [Source:ZFIN;Acc:ZDB-GENE-030717-4]
7. mrp63 mrp63 2500 1.594 0.817 - - - - - 0.777 - -
8. si:ch211-242b18.1 ENSDARG00000054723 2929 1.583 - 0.843 - - - - 0.740 - - si:ch211-242b18.1 [Source:ZFIN;Acc:ZDB-GENE-030131-1518]
9. cnot6l ENSDARG00000054597, ENSDARG00000112672 1586 1.578 - 0.761 - - - - 0.817 - - CCR4-NOT transcription complex, subunit 6-like [Source:ZFIN;Acc:ZDB-GENE-050522-302]
10. zgc:86609 ENSDARG00000029479 923 1.571 - 0.766 - - - - 0.805 - - zgc:86609 [Source:ZFIN;Acc:ZDB-GENE-050102-7]
11. cops5 ENSDARG00000057624 1485 1.569 - 0.789 - - - 0.780 - - - COP9 signalosome subunit 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1686]
12. camlg ENSDARG00000100409 2157 1.562 - 0.776 - - - - 0.786 - - calcium modulating ligand [Source:ZFIN;Acc:ZDB-GENE-040426-2407]
13. flii ENSDARG00000059701 2290 1.559 - 0.799 - - - - 0.760 - - flightless I actin binding protein [Source:ZFIN;Acc:ZDB-GENE-071212-3]
14. twistnb ENSDARG00000024416 1077 1.557 0.709 0.848 - - - - - - - TWIST neighbor [Source:ZFIN;Acc:ZDB-GENE-041007-3]
15. farsa ENSDARG00000098825 2813 1.548 - 0.833 - - - - 0.715 - - phenylalanyl-tRNA synthetase subunit alpha [Source:ZFIN;Acc:ZDB-GENE-050512-2]
16. nars ENSDARG00000061100 2948 1.535 - 0.785 0.750 - - - - - - asparaginyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-1016]
17. pmpca ENSDARG00000102607 1024 1.535 - 0.731 - - - - 0.804 - - peptidase (mitochondrial processing) alpha [Source:ZFIN;Acc:ZDB-GENE-030131-5809]
18. supt6h ENSDARG00000006524 3221 1.526 - 0.792 - - - - 0.734 - - SPT6 homolog, histone chaperone [Source:ZFIN;Acc:ZDB-GENE-030131-7949]
19. dcn ENSDARG00000012066 6182 1.511 - 0.776 - - - - 0.735 - - decorin [Source:ZFIN;Acc:ZDB-GENE-010102-1]
20. sucla2 ENSDARG00000005359 5992 1.505 0.724 0.781 - - - - - - - succinate-CoA ligase, ADP-forming, beta subunit [Source:ZFIN;Acc:ZDB-GENE-040426-1963]
21. sde2 ENSDARG00000024124, ENSDARG00000109881 2342 1.498 - - - - - - 0.792 - 0.706 SDE2 telomere maintenance homolog (S. pombe) [Source:ZFIN;Acc:ZDB-GENE-050417-270]
22. lpl ENSDARG00000087697 2578 1.493 - 0.776 - - - - 0.717 - - lipoprotein lipase [Source:ZFIN;Acc:ZDB-GENE-990415-139]
23. cth ENSDARG00000074301 3860 1.492 0.739 0.753 - - - - - - - cystathionase (cystathionine gamma-lyase) [Source:ZFIN;Acc:ZDB-GENE-030131-774]
24. rassf8b ENSDARG00000045485 1568 1.489 - 0.710 0.779 - - - - - - Ras association (RalGDS/AF-6) domain family (N-terminal) member 8b [Source:ZFIN;Acc:ZDB-GENE-040426-1338]
25. frmd6 ENSDARG00000002332 2698 1.489 - 0.749 - - - - 0.740 - - FERM domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-050522-354]
26. fundc2 ENSDARG00000103740 3856 1.488 - 0.759 0.729 - - - - - - fun14 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-041010-26]
27. alpk3a ENSDARG00000078989 1992 1.486 0.702 0.784 - - - - - - - alpha-kinase 3a [Source:ZFIN;Acc:ZDB-GENE-050419-48]
28. nap1l4b ENSDARG00000068868 3285 1.482 - 0.768 - - - - 0.714 - - nucleosome assembly protein 1-like 4b [Source:ZFIN;Acc:ZDB-GENE-041114-168]
29. col11a1b ENSDARG00000009014 9998 1.475 - 0.739 - - - - 0.736 - - collagen, type XI, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-070912-607]
30. nol7 ENSDARG00000075795 1559 1.474 - 0.723 - - - - 0.751 - - nucleolar protein 7 [Source:ZFIN;Acc:ZDB-GENE-030131-9100]
31. pfdn5 ENSDARG00000035043, ENSDARG00000109218, ENSDARG00000110370, ENSDARG00000113603 7566 1.47 - 0.755 - - - - 0.715 - - prefoldin 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6858]
32. cox7c ENSDARG00000104537 12169 1.464 0.756 - - - - - 0.708 - - cytochrome c oxidase subunit 7C [Source:ZFIN;Acc:ZDB-GENE-030131-8062]
33. mrpl44 ENSDARG00000094277 1778 1.463 0.734 0.729 - - - - - - - mitochondrial ribosomal protein L44 [Source:ZFIN;Acc:ZDB-GENE-050913-59]
34. eif3g ENSDARG00000016889 10367 1.461 0.741 - - - - - 0.720 - - eukaryotic translation initiation factor 3, subunit G [Source:ZFIN;Acc:ZDB-GENE-040426-1076]
35. cops8 ENSDARG00000024846, ENSDARG00000115974 3053 1.461 - 0.731 0.730 - - - - - - COP9 signalosome subunit 8 [Source:ZFIN;Acc:ZDB-GENE-040426-982]
36. adnp2b ENSDARG00000028431 4683 1.461 - 0.743 - - - - 0.718 - - ADNP homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5930]
37. hoxa2b ENSDARG00000023031 706 1.459 - 0.705 - 0.754 - - - - - homeobox A2b [Source:ZFIN;Acc:ZDB-GENE-990415-98]
38. crfb6 1137 1.438 - - - - - - 0.720 - 0.718 cytokine receptor family member b6
39. rrp12 ENSDARG00000022410 2236 1.435 - 0.729 - - - - 0.706 - - ribosomal RNA processing 12 homolog [Source:ZFIN;Acc:ZDB-GENE-050706-182]
40. esd ENSDARG00000019496 3192 1.434 - 0.712 - - - - 0.722 - - esterase D/formylglutathione hydrolase [Source:ZFIN;Acc:ZDB-GENE-050417-328]
41. st5 ENSDARG00000037363, ENSDARG00000112276 1797 1.432 - 0.726 - - - 0.706 - - - suppression of tumorigenicity 5 [Source:ZFIN;Acc:ZDB-GENE-030131-2547]
42. PYURF ENSDARG00000045773 4576 1.429 0.711 0.718 - - - - - - - PIGY upstream reading frame [Source:HGNC Symbol;Acc:HGNC:44317]
43. arhgef4 ENSDARG00000012914 1464 1.426 - 0.712 - - - - 0.714 - - Rho guanine nucleotide exchange factor (GEF) 4 [Source:ZFIN;Acc:ZDB-GENE-070912-575]
44. myod1 ENSDARG00000030110 6019 1.42 0.703 0.717 - - - - - - - myogenic differentiation 1 [Source:ZFIN;Acc:ZDB-GENE-980526-561]
45. irf2bp2a ENSDARG00000004702 6719 1.406 - 0.705 - - - - 0.701 - - interferon regulatory factor 2 binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7809]
46. xirp1 ENSDARG00000030722 1486 0.907 - 0.907 - - - - - - - xin actin binding repeat containing 1 [Source:ZFIN;Acc:ZDB-GENE-050221-2]
47. si:busm1-118j2.5 si:busm1-118j2.5 10462 0.905 - 0.905 - - - - - - -
48. mrps24 ENSDARG00000100116 1750 0.904 - 0.904 - - - - - - - mitochondrial ribosomal protein S24 [Source:ZFIN;Acc:ZDB-GENE-050522-393]
49. si:dkey-25o16.2 1990 0.901 - 0.901 - - - - - - - si:dkey-25o16.2, transcript variant X1
50. ipo4 ENSDARG00000041493 1578 0.894 - 0.894 - - - - - - - importin 4 [Source:ZFIN;Acc:ZDB-GENE-041014-307]
51. rp9 ENSDARG00000098942 3172 0.891 - - - - - - 0.891 - - RP9, pre-mRNA splicing factor [Source:ZFIN;Acc:ZDB-GENE-041114-42]
52. CBFA2T3 ENSDARG00000079012 6799 0.883 - 0.883 - - - - - - - core-binding factor, runt domain, alpha subunit 2; translocated to, 3 [Source:ZFIN;Acc:ZDB-GENE-070209-2]
53. hbae1_1 37308 0.875 - 0.875 - - - - - - - hemoglobin, alpha embryonic 1
54. ssb ENSDARG00000029252 3394 0.873 - 0.873 - - - - - - - Sjogren syndrome antigen B (autoantigen La) [Source:ZFIN;Acc:ZDB-GENE-030131-223]
55. efnb3b ENSDARG00000042277 5823 0.871 - 0.871 - - - - - - - ephrin-B3b [Source:ZFIN;Acc:ZDB-GENE-010618-3]
56. GIGYF1 1830 0.869 - - - - - - 0.869 - - GRB10 interacting GYF protein 1, transcript variant X6
57. lbx2 ENSDARG00000025131 1388 0.868 - 0.868 - - - - - - - ladybird homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-001206-2]
58. timm13 ENSDARG00000058297 4447 0.868 - 0.868 - - - - - - - translocase of inner mitochondrial membrane 13 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-167]
59. ube2g1a ENSDARG00000015292, ENSDARG00000112281 3207 0.867 - 0.867 - - - - - - - ubiquitin-conjugating enzyme E2G 1a (UBC7 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-6065]
60. MYOT ENSDARG00000076312 1791 0.864 - 0.864 - - - - - - - myotilin [Source:ZFIN;Acc:ZDB-GENE-110411-129]
61. Sep-06 Sep-06 5465 0.862 - 0.862 - - - - - - -
62. prmt1 ENSDARG00000010246 11311 0.861 - 0.861 - - - - - - - protein arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-693]
63. timm8b ENSDARG00000055708 7291 0.859 - 0.859 - - - - - - - translocase of inner mitochondrial membrane 8 homolog B (yeast) [Source:ZFIN;Acc:ZDB-GENE-031019-1]
64. cdkal1 ENSDARG00000104848 2102 0.858 - 0.858 - - - - - - - CDK5 regulatory subunit associated protein 1-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1443]
65. vps25 ENSDARG00000059079 3747 0.857 - - - - - 0.857 - - - vacuolar protein sorting 25 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050506-30]
66. rrp7a ENSDARG00000098934 1123 0.855 - 0.855 - - - - - - - ribosomal RNA processing 7 homolog A [Source:ZFIN;Acc:ZDB-GENE-050417-38]
67. pelo ENSDARG00000055477 1927 0.852 - 0.852 - - - - - - - pelota mRNA surveillance and ribosome rescue factor [Source:ZFIN;Acc:ZDB-GENE-040426-1074]
68. cct8 ENSDARG00000008243 6843 0.851 - 0.851 - - - - - - - chaperonin containing TCP1, subunit 8 (theta) [Source:ZFIN;Acc:ZDB-GENE-040426-876]
69. zgc:158564 ENSDARG00000052244 954 0.849 - 0.849 - - - - - - - zgc:158564 [Source:ZFIN;Acc:ZDB-GENE-070112-1662]
70. nudt3a ENSDARG00000016256 2713 0.849 - 0.849 - - - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 3a [Source:ZFIN;Acc:ZDB-GENE-040426-792]
71. gpx7 ENSDARG00000091511 3045 0.847 - 0.847 - - - - - - - glutathione peroxidase 7 [Source:ZFIN;Acc:ZDB-GENE-050522-419]
72. snrnp70 ENSDARG00000077126 5921 0.846 - 0.846 - - - - - - - small nuclear ribonucleoprotein 70 (U1) [Source:ZFIN;Acc:ZDB-GENE-040825-2]
73. syf2 ENSDARG00000004706 2463 0.846 - - - - - - 0.846 - - SYF2 pre-mRNA-splicing factor [Source:ZFIN;Acc:ZDB-GENE-040801-170]
74. eif2s3 ENSDARG00000008292 17051 0.846 - 0.846 - - - - - - - eukaryotic translation initiation factor 2, subunit 3 gamma [Source:ZFIN;Acc:ZDB-GENE-030131-5552]
75. FILIP1 339 0.845 - 0.845 - - - - - - - filamin A interacting protein 1
76. spata18 ENSDARG00000052343 216 0.845 - 0.845 - - - - - - - spermatogenesis associated 18 [Source:ZFIN;Acc:ZDB-GENE-050522-306]
77. polr2k ENSDARG00000075616 2047 0.844 - 0.844 - - - - - - - polymerase (RNA) II (DNA directed) polypeptide K [Source:ZFIN;Acc:ZDB-GENE-070820-18]
78. mrpl27 ENSDARG00000032985 2158 0.844 - 0.844 - - - - - - - mitochondrial ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-050522-129]
79. arid2 ENSDARG00000007413 4413 0.841 - 0.841 - - - - - - - AT rich interactive domain 2 (ARID, RFX-like) [Source:ZFIN;Acc:ZDB-GENE-030131-6311]
80. zgc:123105 ENSDARG00000003127 3061 0.841 - 0.841 - - - - - - - zgc:123105 [Source:ZFIN;Acc:ZDB-GENE-051113-272]
81. pomp ENSDARG00000032296 4439 0.841 - 0.841 - - - - - - - proteasome maturation protein [Source:ZFIN;Acc:ZDB-GENE-040801-10]
82. pbxip1a ENSDARG00000071015 4960 0.841 - 0.841 - - - - - - - pre-B-cell leukemia homeobox interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-060503-871]
83. fam96b 2255 0.838 - 0.838 - - - - - - - family with sequence similarity 96, member B
84. ndufab1b ENSDARG00000014915 12796 0.838 - 0.838 - - - - - - - NADH:ubiquinone oxidoreductase subunit AB1b [Source:ZFIN;Acc:ZDB-GENE-030131-4437]
85. pdhx ENSDARG00000051756 924 0.837 - 0.837 - - - - - - - pyruvate dehydrogenase complex, component X [Source:ZFIN;Acc:ZDB-GENE-040426-1539]
86. knop1 ENSDARG00000077721 2198 0.837 - 0.837 - - - - - - - lysine-rich nucleolar protein 1 [Source:ZFIN;Acc:ZDB-GENE-090313-76]
87. nae1 ENSDARG00000011301, ENSDARG00000111542 1505 0.836 - 0.836 - - - - - - - nedd8 activating enzyme E1 subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1552]
88. alpk2 ENSDARG00000079637 1483 0.835 - 0.835 - - - - - - - alpha-kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1868]
89. si:ch211-197h24.6 ENSDARG00000091631 1933 0.834 - 0.834 - - - - - - - si:ch211-197h24.6 [Source:ZFIN;Acc:ZDB-GENE-030131-1361]
90. hsd17b10 ENSDARG00000017781 1793 0.834 - 0.834 - - - - - - - hydroxysteroid (17-beta) dehydrogenase 10 [Source:ZFIN;Acc:ZDB-GENE-041010-201]
91. hdgfrp2 7462 0.834 - 0.834 - - - - - - - hepatoma-derived growth factor-related protein 2, transcript variant X1
92. usf1l ENSDARG00000014463, ENSDARG00000109684, ENSDARG00000114279 1581 0.833 - 0.833 - - - - - - - upstream transcription factor 1, like [Source:ZFIN;Acc:ZDB-GENE-040426-2269]
93. elp5 ENSDARG00000067918 541 0.833 - 0.833 - - - - - - - elongator acetyltransferase complex subunit 5 [Source:ZFIN;Acc:ZDB-GENE-061215-33]
94. dnajc19 ENSDARG00000044420 1756 0.833 - 0.833 - - - - - - - DnaJ (Hsp40) homolog, subfamily C, member 19 [Source:ZFIN;Acc:ZDB-GENE-040426-1730]
95. lnpa ENSDARG00000063646, ENSDARG00000115902 2373 0.832 - 0.832 - - - - - - - limb and neural patterns a [Source:ZFIN;Acc:ZDB-GENE-030131-4960]
96. slc20a1b ENSDARG00000010641 2564 0.832 - - - - - 0.832 - - - solute carrier family 20 (phosphate transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-030131-260]
97. PHB2 PHB2 3755 0.832 - 0.832 - - - - - - -
98. acat1 ENSDARG00000045888 1488 0.831 - - - - - - 0.831 - - acetyl-CoA acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040808-68]
99. hoxb5a ENSDARG00000013057 735 0.831 - - - - - - 0.831 - - homeobox B5a [Source:ZFIN;Acc:ZDB-GENE-980526-70]
100. MRPL21 ENSDARG00000003846 3244 0.831 - 0.831 - - - - - - - mitochondrial ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-061027-183]

There are 874 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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