Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for pim3

Gene Name Gene ID Reads Annotation
pim3 ENSDARG00000055129 1517 Pim-3 proto-oncogene, serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-050809-111]










Genes with expression patterns similar to pim3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pim3 ENSDARG00000055129 1517 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Pim-3 proto-oncogene, serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-050809-111]
2. RNF214 RNF214 816 1.755 - 0.765 - - 0.990 - - - -
3. hcfc1b ENSDARG00000012519 3633 1.738 - 0.755 - - 0.983 - - - - host cell factor C1b [Source:ZFIN;Acc:ZDB-GENE-030131-2411]
4. ptdss1 ptdss1 1143 1.715 - - - - 0.985 - 0.730 - -
5. acbd6 ENSDARG00000039456 2355 1.715 - - - - 0.988 - 0.727 - - acyl-CoA binding domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-030131-2810]
6. rnd3a ENSDARG00000076799 4705 1.713 - - - - 0.991 - - - 0.722 Rho family GTPase 3a [Source:ZFIN;Acc:ZDB-GENE-010319-40]
7. acvr2aa ENSDARG00000011188 1454 1.701 0.708 - - - 0.993 - - - - activin A receptor type 2Aa [Source:ZFIN;Acc:ZDB-GENE-980526-227]
8. cd248b ENSDARG00000077938 2561 1.698 - 0.710 - - 0.988 - - - - CD248 molecule, endosialin b [Source:ZFIN;Acc:ZDB-GENE-050309-46]
9. tet3 ENSDARG00000062646 6672 1.682 - - - - 0.932 - - - 0.750 tet methylcytosine dioxygenase 3 [Source:ZFIN;Acc:ZDB-GENE-060526-109]
10. aip ENSDARG00000104437 3574 1.653 - - - - 0.951 - 0.702 - - aryl hydrocarbon receptor interacting protein [Source:ZFIN;Acc:ZDB-GENE-030131-6735]
11. sars2 ENSDARG00000102736 206 1.567 0.750 0.817 - - - - - - - seryl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-040426-1616]
12. znf592 ENSDARG00000060885 776 1.542 0.803 0.739 - - - - - - - zinc finger protein 592 [Source:ZFIN;Acc:ZDB-GENE-030131-9613]
13. si:ch211-233a24.2 ENSDARG00000062330, ENSDARG00000110766, ENSDARG00000116929 622 1.538 - 0.707 - - - - - - 0.831 si:ch211-233a24.2 [Source:ZFIN;Acc:ZDB-GENE-090313-98]
14. cstf1 ENSDARG00000044820 1663 1.474 0.735 - - - - 0.739 - - - cleavage stimulation factor, 3' pre-RNA, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2958]
15. CT990569.2 CT990569.2 531 1.47 0.756 - - - - 0.714 - - -
16. gemin2 ENSDARG00000015638 886 1.447 - 0.719 - - - - - 0.728 - gem (nuclear organelle) associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3756]
17. ube2e2 ENSDARG00000034670 5918 1.43 - - - - - - - 0.704 0.726 ubiquitin-conjugating enzyme E2E 2 [Source:ZFIN;Acc:ZDB-GENE-040801-237]
18. rbms2b ENSDARG00000056150, ENSDARG00000115483 2104 1.421 - 0.720 - - - - 0.701 - - RNA binding motif, single stranded interacting protein 2b [Source:ZFIN;Acc:ZDB-GENE-040801-51]
19. sema3fa ENSDARG00000011163 759 0.995 - - - - 0.995 - - - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fa [Source:ZFIN;Acc:ZDB-GENE-050513-1]
20. git2b ENSDARG00000042791, ENSDARG00000111846 1332 0.995 - - - - 0.995 - - - - G protein-coupled receptor kinase interacting ArfGAP 2b [Source:ZFIN;Acc:ZDB-GENE-070112-2192]
21. tmem234 ENSDARG00000078333 488 0.995 - - - - 0.995 - - - - transmembrane protein 234 [Source:ZFIN;Acc:ZDB-GENE-090313-326]
22. si:dkey-30k6.5 ENSDARG00000057238 617 0.995 - - - - 0.995 - - - - si:dkey-30k6.5 [Source:ZFIN;Acc:ZDB-GENE-091204-299]
23. CABZ01073954.1 CABZ01073954.1 258 0.994 - - - - 0.994 - - - -
24. errfi1 errfi1 979 0.994 - - - - 0.994 - - - -
25. si:dkey-114e9.1 si:dkey-114e9.1 233 0.994 - - - - 0.994 - - - -
26. elk3 ENSDARG00000018688, ENSDARG00000110853 1108 0.994 - - - - 0.994 - - - - ELK3, ETS-domain protein [Source:ZFIN;Acc:ZDB-GENE-030716-2]
27. inpp4aa ENSDARG00000063352 1297 0.994 - - - - 0.994 - - - - inositol polyphosphate-4-phosphatase type I Aa [Source:ZFIN;Acc:ZDB-GENE-060312-5]
28. C3H16orf89 C3H16orf89 449 0.994 - - - - 0.994 - - - -
29. synm ENSDARG00000062350, ENSDARG00000113948, ENSDARG00000114029 483 0.994 - - - - 0.994 - - - - synemin, intermediate filament protein [Source:ZFIN;Acc:ZDB-GENE-050419-81]
30. slc4a2b ENSDARG00000052330 1900 0.994 - - - - 0.994 - - - - solute carrier family 4 (anion exchanger), member 2b [Source:ZFIN;Acc:ZDB-GENE-030429-14]
31. kcnq5a ENSDARG00000069954 492 0.994 - - - - 0.994 - - - - potassium voltage-gated channel, KQT-like subfamily, member 5a [Source:ZFIN;Acc:ZDB-GENE-090312-185]
32. KIF4A KIF4A 3322 0.994 - - - - 0.994 - - - -
33. pbx1a ENSDARG00000100494 854 0.994 - - - - 0.994 - - - - pre-B-cell leukemia homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-000405-1]
34. si:dkey-70e17.2 si:dkey-70e17.2 371 0.994 - - - - 0.994 - - - -
35. RNF111 ENSDARG00000078802 1357 0.994 - - - - 0.994 - - - - ring finger protein 111 [Source:ZFIN;Acc:ZDB-GENE-070808-2]
36. trim24 ENSDARG00000103350 431 0.993 - - - - 0.993 - - - - tripartite motif containing 24 [Source:ZFIN;Acc:ZDB-GENE-030131-5913]
37. wdr43 ENSDARG00000077264 1992 0.993 - - - - 0.993 - - - - WD repeat domain 43 [Source:ZFIN;Acc:ZDB-GENE-021231-3]
38. nrg2a ENSDARG00000077818 854 0.993 - - - - 0.993 - - - - neuregulin 2a [Source:ZFIN;Acc:ZDB-GENE-070615-10]
39. vldlr ENSDARG00000006257 772 0.993 - - - - 0.993 - - - - very low density lipoprotein receptor [Source:ZFIN;Acc:ZDB-GENE-040426-803]
40. gabpb2a ENSDARG00000007943 1570 0.993 - - - - 0.993 - - - - GA binding protein transcription factor subunit beta 2a [Source:ZFIN;Acc:ZDB-GENE-030131-5733]
41. slc46a1 ENSDARG00000026149 297 0.993 - - - - 0.993 - - - - solute carrier family 46 (folate transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1012]
42. 5S_rRNA_21 5S_rRNA_21 1323 0.993 - - - - 0.993 - - - -
43. bin2b ENSDARG00000010255 2649 0.993 - - - - 0.993 - - - - bridging integrator 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5598]
44. commd4 ENSDARG00000061946 3281 0.993 - - - - 0.993 - - - - COMM domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060929-600]
45. rfc5 ENSDARG00000035634 974 0.993 - - - - 0.993 - - - - replication factor C (activator 1) 5 [Source:ZFIN;Acc:ZDB-GENE-040907-1]
46. ifrd1 ENSDARG00000068708 2858 0.992 - - - - 0.992 - - - - interferon-related developmental regulator 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6132]
47. zgc:163098 ENSDARG00000078911, ENSDARG00000111691, ENSDARG00000113714, ENSDARG00000115110 1802 0.992 - - - - 0.992 - - - - zgc:163098 [Source:ZFIN;Acc:ZDB-GENE-070410-141]
48. ttc27 ENSDARG00000007918 1228 0.992 - - - - 0.992 - - - - tetratricopeptide repeat domain 27 [Source:ZFIN;Acc:ZDB-GENE-030102-1]
49. tpt1 ENSDARG00000092693 1110 0.992 - - - - 0.992 - - - - tumor protein, translationally-controlled 1 [Source:ZFIN;Acc:ZDB-GENE-990603-10]
50. epc1 epc1 1164 0.992 - - - - 0.992 - - - -
51. suds3 ENSDARG00000073737, ENSDARG00000116918 2416 0.992 - - - - 0.992 - - - - SDS3 homolog, SIN3A corepressor complex component [Source:ZFIN;Acc:ZDB-GENE-040801-236]
52. klf11a ENSDARG00000030844 3972 0.991 - - - - 0.991 - - - - Kruppel-like factor 11a [Source:ZFIN;Acc:ZDB-GENE-030131-3568]
53. ifrd2 ENSDARG00000036811, ENSDARG00000115385 3697 0.991 - - - - 0.991 - - - - interferon-related developmental regulator 2 [Source:ZFIN;Acc:ZDB-GENE-040801-140]
54. slc48a1b ENSDARG00000026109 1427 0.991 - - - - 0.991 - - - - solute carrier family 48 (heme transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8226]
55. ppip5k2 ENSDARG00000078441 1074 0.991 - - - - 0.991 - - - - diphosphoinositol pentakisphosphate kinase 2 [Source:ZFIN;Acc:ZDB-GENE-091204-125]
56. ERO1LB ERO1LB 1433 0.991 - - - - 0.991 - - - -
57. CR361563.1 CR361563.1 1355 0.99 - - - - 0.990 - - - -
58. foxa2 ENSDARG00000003411 2309 0.99 - - - - 0.990 - - - - forkhead box A2 [Source:ZFIN;Acc:ZDB-GENE-980526-404]
59. ripk4 ENSDARG00000043211 775 0.99 - - - - 0.990 - - - - receptor-interacting serine-threonine kinase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2042]
60. srcap ENSDARG00000005236 1740 0.99 - - - - 0.990 - - - - Snf2-related CREBBP activator protein [Source:ZFIN;Acc:ZDB-GENE-041008-127]
61. CABZ01072607.1 ENSDARG00000113761 784 0.99 - - - - 0.990 - - - - dynein cytoplasmic 2 heavy chain 1 [Source:NCBI gene;Acc:100332402]
62. slc9a3r1 slc9a3r1 743 0.989 - - - - 0.989 - - - -
63. zdhhc9 ENSDARG00000060515 981 0.989 - - - - 0.989 - - - - zinc finger, DHHC-type containing 9 [Source:ZFIN;Acc:ZDB-GENE-071004-8]
64. VPS37B_1 VPS37B_1 1816 0.989 - - - - 0.989 - - - -
65. MARK3 MARK3 1767 0.989 - - - - 0.989 - - - -
66. akirin1 ENSDARG00000039969, ENSDARG00000116670 2533 0.989 - - - - 0.989 - - - - akirin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2178]
67. smim7 ENSDARG00000074848 1260 0.988 - - - - 0.988 - - - - small integral membrane protein 7 [Source:ZFIN;Acc:ZDB-GENE-060810-180]
68. DENND4B ENSDARG00000102914 1001 0.988 - - - - 0.988 - - - - DENN/MADD domain containing 4B [Source:ZFIN;Acc:ZDB-GENE-130530-684]
69. cisd1 ENSDARG00000079516, ENSDARG00000114546 2677 0.988 - - - - 0.988 - - - - CDGSH iron sulfur domain 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1162]
70. ctdspla ENSDARG00000071673 1447 0.988 - - - - 0.988 - - - - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like a [Source:ZFIN;Acc:ZDB-GENE-060825-333]
71. pds5b ENSDARG00000098897 1732 0.988 - - - - 0.988 - - - - PDS5 cohesin associated factor B [Source:ZFIN;Acc:ZDB-GENE-091217-2]
72. iars2 ENSDARG00000044134 1990 0.988 - - - - 0.988 - - - - isoleucyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030616-608]
73. ARID3A ENSDARG00000070843 1613 0.987 - - - - 0.987 - - - - AT rich interactive domain 3A (BRIGHT-like) [Source:ZFIN;Acc:ZDB-GENE-140106-97]
74. si:dkey-228b2.5 1760 0.987 - - - - 0.987 - - - - si:dkey-228b2.5
75. hey1 ENSDARG00000070538 986 0.986 - - - - 0.986 - - - - hes-related family bHLH transcription factor with YRPW motif 1 [Source:ZFIN;Acc:ZDB-GENE-000607-70]
76. arl14ep ENSDARG00000001210 3029 0.986 - - - - 0.986 - - - - ADP-ribosylation factor-like 14 effector protein [Source:ZFIN;Acc:ZDB-GENE-060825-216]
77. limk2 ENSDARG00000005104 2598 0.986 - - - - 0.986 - - - - LIM domain kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040718-398]
78. si:dkeyp-13a3.7 si:dkeyp-13a3.7 3422 0.986 - - - - 0.986 - - - -
79. itga5 ENSDARG00000006353 1876 0.986 - - - - 0.986 - - - - integrin, alpha 5 (fibronectin receptor, alpha polypeptide) [Source:ZFIN;Acc:ZDB-GENE-031116-52]
80. snx1a ENSDARG00000071031 3975 0.985 - - - - 0.985 - - - - sorting nexin 1a [Source:ZFIN;Acc:ZDB-GENE-060302-3]
81. cwc22 ENSDARG00000014008 2385 0.985 - - - - 0.985 - - - - CWC22 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060929-452]
82. galnt7 ENSDARG00000057303 2017 0.985 - - - - 0.985 - - - - UDP-N-acetyl-alpha-D-galactosamine: polypeptide N-acetylgalactosaminyltransferase 7 [Source:ZFIN;Acc:ZDB-GENE-050522-284]
83. nudt3a ENSDARG00000016256 2713 0.985 - - - - 0.985 - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 3a [Source:ZFIN;Acc:ZDB-GENE-040426-792]
84. maf1 ENSDARG00000013122 3365 0.984 - - - - 0.984 - - - - MAF1 homolog, negative regulator of RNA polymerase III [Source:ZFIN;Acc:ZDB-GENE-040426-2788]
85. snrpe ENSDARG00000033175 7462 0.984 - - - - 0.984 - - - - small nuclear ribonucleoprotein polypeptide E [Source:ZFIN;Acc:ZDB-GENE-040426-1112]
86. trpc4apa ENSDARG00000018840 2543 0.984 - - - - 0.984 - - - - transient receptor potential cation channel, subfamily C, member 4 associated protein a [Source:ZFIN;Acc:ZDB-GENE-000330-3]
87. vps25 ENSDARG00000059079 3747 0.983 - - - - 0.983 - - - - vacuolar protein sorting 25 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050506-30]
88. BX571880.1 ENSDARG00000097533 499 0.983 - - - - 0.983 - - - -
89. psmb2 ENSDARG00000031511 4016 0.983 - - - - 0.983 - - - - proteasome subunit beta 2 [Source:ZFIN;Acc:ZDB-GENE-040718-353]
90. phf2 ENSDARG00000018691 3341 0.983 - - - - 0.983 - - - - PHD finger protein 2 [Source:ZFIN;Acc:ZDB-GENE-050302-10]
91. keap1b ENSDARG00000074634 1513 0.982 - - - - 0.982 - - - - kelch-like ECH-associated protein 1b [Source:ZFIN;Acc:ZDB-GENE-080508-1]
92. WDR61 ENSDARG00000007755 2827 0.982 - - - - 0.982 - - - - WD repeat domain 61 [Source:ZFIN;Acc:ZDB-GENE-040426-1851]
93. hoxc11a ENSDARG00000070351 1783 0.981 - - - - 0.981 - - - - homeobox C11a [Source:ZFIN;Acc:ZDB-GENE-990415-111]
94. onecut1 ENSDARG00000007982, ENSDARG00000112251 6307 0.981 - - - - 0.981 - - - - one cut homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1469]
95. slc38a5a ENSDARG00000009901 2527 0.981 - - - - 0.981 - - - - solute carrier family 38, member 5a [Source:ZFIN;Acc:ZDB-GENE-081105-92]
96. stam2 ENSDARG00000005318 2980 0.98 - - - - 0.980 - - - - signal transducing adaptor molecule (SH3 domain and ITAM motif) 2 [Source:ZFIN;Acc:ZDB-GENE-041114-64]
97. nat8l ENSDARG00000077256, ENSDARG00000115322 3513 0.98 - - - - 0.980 - - - - N-acetyltransferase 8-like [Source:ZFIN;Acc:ZDB-GENE-030729-4]
98. CCDC71 CCDC71 2442 0.98 - - - - 0.980 - - - -
99. AP2A1 ENSDARG00000054320 5591 0.979 - - - - 0.979 - - - - adaptor related protein complex 2 subunit alpha 1 [Source:ZFIN;Acc:ZDB-GENE-090302-2]
100. sox9b ENSDARG00000043923 5375 0.978 - - - - 0.978 - - - - SRY (sex determining region Y)-box 9b [Source:ZFIN;Acc:ZDB-GENE-001103-2]

There are 597 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA