Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for phrf1

Gene Name Gene ID Reads Annotation
phrf1 ENSDARG00000075252 1982 PHD and ring finger domains 1 [Source:ZFIN;Acc:ZDB-GENE-030131-624]










Genes with expression patterns similar to phrf1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. phrf1 ENSDARG00000075252 1982 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 PHD and ring finger domains 1 [Source:ZFIN;Acc:ZDB-GENE-030131-624]
2. apc ENSDARG00000058868 2605 2.367 - 0.749 - - - - 0.751 - 0.867 adenomatous polyposis coli [Source:ZFIN;Acc:ZDB-GENE-031112-7]
3. EEF1E1 ENSDARG00000071774 3806 1.77 - 0.856 - - - - - - 0.914 eukaryotic translation elongation factor 1 epsilon 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4949]
4. kpna3 ENSDARG00000052641 5347 1.701 - 0.844 - - - - - - 0.857 karyopherin alpha 3 (importin alpha 4) [Source:ZFIN;Acc:ZDB-GENE-030616-541]
5. znf296 ENSDARG00000077897 658 1.698 0.777 - - - - - - - 0.921 zinc finger protein 296 [Source:ZFIN;Acc:ZDB-GENE-050419-201]
6. zfand5b ENSDARG00000002271 4145 1.69 - 0.720 - - - - - - 0.970 zinc finger, AN1-type domain 5b [Source:ZFIN;Acc:ZDB-GENE-040426-875]
7. CCDC71 CCDC71 2442 1.677 - 0.762 - - - - - - 0.915
8. nup188 ENSDARG00000030022 2398 1.665 - 0.746 - - - - - - 0.919 nucleoporin 188 [Source:ZFIN;Acc:ZDB-GENE-030131-7184]
9. paip2b ENSDARG00000008706 4255 1.641 0.861 0.780 - - - - - - - poly(A) binding protein interacting protein 2B [Source:ZFIN;Acc:ZDB-GENE-040426-1736]
10. pvrl3l pvrl3l 943 1.638 0.724 - - - - - - - 0.914
11. pi4k2b ENSDARG00000013881 1337 1.633 0.718 - - - - - - - 0.915 phosphatidylinositol 4-kinase type 2 beta [Source:ZFIN;Acc:ZDB-GENE-070112-990]
12. frmd6 ENSDARG00000002332 2698 1.633 - 0.791 - - - - - - 0.842 FERM domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-050522-354]
13. cdkal1 ENSDARG00000104848 2102 1.632 - 0.709 - - - - - - 0.923 CDK5 regulatory subunit associated protein 1-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1443]
14. fzd7b ENSDARG00000027589 2562 1.631 - 0.768 - - - - - - 0.863 frizzled class receptor 7b [Source:ZFIN;Acc:ZDB-GENE-990415-229]
15. fastk ENSDARG00000077075 1619 1.626 - 0.708 - - - - - - 0.918 Fas-activated serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-070912-680]
16. ywhag2 ENSDARG00000071658, ENSDARG00000116741 3326 1.626 - 0.751 - - - - - - 0.875 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-061023-2]
17. ef1 1343 1.623 0.702 - - - - - - - 0.921 E74-like factor 1 (ets domain transcription factor), transcript variant X4
18. mrpl40 ENSDARG00000043554 2198 1.613 - 0.759 - - - - - - 0.854 mitochondrial ribosomal protein L40 [Source:ZFIN;Acc:ZDB-GENE-040912-37]
19. maf1 ENSDARG00000013122 3365 1.613 - 0.712 - - - - - - 0.901 MAF1 homolog, negative regulator of RNA polymerase III [Source:ZFIN;Acc:ZDB-GENE-040426-2788]
20. exosc1 ENSDARG00000059841 6895 1.601 - 0.713 - - - - - - 0.888 exosome component 1 [Source:ZFIN;Acc:ZDB-GENE-080926-3]
21. C18H12orf23 C18H12orf23 5362 1.595 - 0.709 - - - - - - 0.886
22. rcn3 ENSDARG00000037961, ENSDARG00000110075 1544 1.584 - - - - - - 0.755 - 0.829 reticulocalbin 3, EF-hand calcium binding domain [Source:ZFIN;Acc:ZDB-GENE-040625-175]
23. mccc2 ENSDARG00000017571 5635 1.582 0.789 - - - - - - - 0.793 methylcrotonoyl-CoA carboxylase 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-040426-2493]
24. snrpe ENSDARG00000033175 7462 1.582 - 0.758 - - - - - - 0.824 small nuclear ribonucleoprotein polypeptide E [Source:ZFIN;Acc:ZDB-GENE-040426-1112]
25. prmt1 ENSDARG00000010246 11311 1.571 - 0.752 - - - - - - 0.819 protein arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-693]
26. galnt1 ENSDARG00000061335 1648 1.57 - 0.734 - - - - 0.836 - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2360]
27. inpp5b ENSDARG00000103683 2792 1.567 - 0.722 - - - - - - 0.845 inositol polyphosphate-5-phosphatase B [Source:ZFIN;Acc:ZDB-GENE-110411-228]
28. bysl ENSDARG00000001057 2621 1.56 0.790 0.770 - - - - - - - bystin-like [Source:ZFIN;Acc:ZDB-GENE-040426-1287]
29. chpf2 ENSDARG00000059961 679 1.555 0.809 0.746 - - - - - - - chondroitin polymerizing factor 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7797]
30. kmt2bb ENSDARG00000060697 5230 1.554 - 0.805 0.749 - - - - - - lysine (K)-specific methyltransferase 2Bb [Source:ZFIN;Acc:ZDB-GENE-080521-1]
31. epn1 ENSDARG00000010411 725 1.551 0.781 0.770 - - - - - - - epsin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2680]
32. rbm25 rbm25 3629 1.543 - 0.839 - - - 0.704 - - -
33. NEDD4 NEDD4 2040 1.539 - 0.751 - - - 0.788 - - -
34. dnaja3a ENSDARG00000058494, ENSDARG00000111151 2497 1.534 0.752 0.782 - - - - - - - DnaJ (Hsp40) homolog, subfamily A, member 3A [Source:ZFIN;Acc:ZDB-GENE-030131-7837]
35. bcl7bb ENSDARG00000040396, ENSDARG00000116093 764 1.519 0.810 0.709 - - - - - - - BCL tumor suppressor 7Bb [Source:ZFIN;Acc:ZDB-GENE-010328-17]
36. eya4 ENSDARG00000012397, ENSDARG00000117039 887 1.513 - 0.769 - - - 0.744 - - - EYA transcriptional coactivator and phosphatase 4 [Source:ZFIN;Acc:ZDB-GENE-050327-93]
37. timm13 ENSDARG00000058297 4447 1.504 - 0.747 - - - 0.757 - - - translocase of inner mitochondrial membrane 13 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-167]
38. si:dkeyp-120h9.1 ENSDARG00000020278 3120 1.5 0.732 0.768 - - - - - - - si:dkeyp-120h9.1 [Source:ZFIN;Acc:ZDB-GENE-070705-534]
39. tpt1 ENSDARG00000092693 1110 1.5 - 0.762 - - - 0.738 - - - tumor protein, translationally-controlled 1 [Source:ZFIN;Acc:ZDB-GENE-990603-10]
40. sf3b5 ENSDARG00000016855 4015 1.496 0.793 0.703 - - - - - - - splicing factor 3b, subunit 5 [Source:ZFIN;Acc:ZDB-GENE-040718-181]
41. zzz3 ENSDARG00000077581 1343 1.496 - - - - - 0.727 0.769 - - zinc finger, ZZ-type containing 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6450]
42. alad ENSDARG00000100372 1711 1.495 0.712 0.783 - - - - - - - aminolevulinate dehydratase [Source:ZFIN;Acc:ZDB-GENE-050417-123]
43. gapdhs ENSDARG00000039914 8760 1.492 - 0.707 - - - - - - 0.785 glyceraldehyde-3-phosphate dehydrogenase, spermatogenic [Source:ZFIN;Acc:ZDB-GENE-020913-1]
44. ppih ENSDARG00000041530 2085 1.488 0.771 - - 0.717 - - - - - peptidylprolyl isomerase H (cyclophilin H) [Source:ZFIN;Acc:ZDB-GENE-040625-127]
45. hmcn2 ENSDARG00000079327, ENSDARG00000086060 1075 1.488 - - - - - - 0.734 - 0.754 hemicentin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9765]
46. ncalda ENSDARG00000070688 5069 1.48 - 0.759 - - - - 0.721 - - neurocalcin delta a [Source:ZFIN;Acc:ZDB-GENE-080220-28]
47. ptpn21 ENSDARG00000062248 2010 1.471 0.759 0.712 - - - - - - - protein tyrosine phosphatase, non-receptor type 21 [Source:ZFIN;Acc:ZDB-GENE-080102-4]
48. CCDC137 ENSDARG00000104024, ENSDARG00000110733 1855 1.465 0.700 0.765 - - - - - - - coiled-coil domain containing 137 [Source:ZFIN;Acc:ZDB-GENE-060929-1206]
49. srsf4 ENSDARG00000105293 9657 1.465 - 0.750 - - - 0.715 - - - serine/arginine-rich splicing factor 4 [Source:ZFIN;Acc:ZDB-GENE-030131-591]
50. CYHR1 ENSDARG00000061057 2625 1.444 - 0.722 - - - - 0.722 - - cysteine/histidine-rich 1 [Source:ZFIN;Acc:ZDB-GENE-060929-720]
51. rhot2 ENSDARG00000056328 1123 1.428 - 0.703 0.725 - - - - - - ras homolog family member T2 [Source:ZFIN;Acc:ZDB-GENE-051120-96]
52. mgat4b ENSDARG00000004115 538 1.427 - 0.717 - - - - 0.710 - - alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B [Source:ZFIN;Acc:ZDB-GENE-040704-19]
53. alpk3a ENSDARG00000078989 1992 1.422 - 0.718 - - - 0.704 - - - alpha-kinase 3a [Source:ZFIN;Acc:ZDB-GENE-050419-48]
54. brd3a ENSDARG00000006527 1636 1.421 0.711 0.710 - - - - - - - bromodomain containing 3a [Source:ZFIN;Acc:ZDB-GENE-030131-6141]
55. mpnd ENSDARG00000061989 817 0.977 - - - - - - - - 0.977 MPN domain containing [Source:ZFIN;Acc:ZDB-GENE-060929-1162]
56. timm10 ENSDARG00000069116 4459 0.971 - - - - - - - - 0.971 translocase of inner mitochondrial membrane 10 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-427]
57. ppp2r2d ENSDARG00000102009 5710 0.97 - - - - - - - - 0.970 protein phosphatase 2, regulatory subunit B, delta [Source:ZFIN;Acc:ZDB-GENE-040426-2086]
58. sra1 ENSDARG00000053619 2799 0.958 - - - - - - - - 0.958 steroid receptor RNA activator 1 [Source:ZFIN;Acc:ZDB-GENE-040625-6]
59. cpsf3 ENSDARG00000027649 6897 0.955 - - - - - - - - 0.955 cleavage and polyadenylation specific factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3275]
60. hn1l hn1l 8861 0.949 - - - - - - - - 0.949
61. zgc:100918 ENSDARG00000087243 5451 0.945 - - - - - - - - 0.945 zgc:100918 [Source:ZFIN;Acc:ZDB-GENE-040927-2]
62. ppa1b ENSDARG00000030441 9027 0.944 - - - - - - - - 0.944 pyrophosphatase (inorganic) 1b [Source:ZFIN;Acc:ZDB-GENE-050417-375]
63. homer3 homer3 1974 0.931 - - - - - - - - 0.931
64. tfdp1b ENSDARG00000016304 3071 0.931 - - - - - - - - 0.931 transcription factor Dp-1, b [Source:ZFIN;Acc:ZDB-GENE-040426-1746]
65. sars ENSDARG00000008237 3330 0.93 - 0.930 - - - - - - - seryl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-040831-1]
66. otub1a ENSDARG00000055536 2892 0.93 - - - - - - - - 0.930 OTU deubiquitinase, ubiquitin aldehyde binding 1a [Source:ZFIN;Acc:ZDB-GENE-040718-108]
67. magi1b ENSDARG00000003169 2056 0.93 - - - - - - - - 0.930 membrane associated guanylate kinase, WW and PDZ domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-030131-5110]
68. nol10 ENSDARG00000020077 984 0.93 - - - - - - - - 0.930 nucleolar protein 10 [Source:ZFIN;Acc:ZDB-GENE-040426-764]
69. smad2 ENSDARG00000006389 646 0.93 - - - - - - - - 0.930 SMAD family member 2 [Source:ZFIN;Acc:ZDB-GENE-990603-7]
70. DTX4 ENSDARG00000076302 2642 0.929 - - - - - - - - 0.929 deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
71. SENP7 SENP7 1097 0.929 - - - - - - - - 0.929
72. arl14ep ENSDARG00000001210 3029 0.928 - - - - - - - - 0.928 ADP-ribosylation factor-like 14 effector protein [Source:ZFIN;Acc:ZDB-GENE-060825-216]
73. bcl9 ENSDARG00000036687 1124 0.928 - - - - - - - - 0.928 B cell CLL/lymphoma 9 [Source:ZFIN;Acc:ZDB-GENE-090313-135]
74. TUBB8P7_1 TUBB8P7_1 2722 0.928 - - - - - - - - 0.928
75. rhogd ENSDARG00000030608, ENSDARG00000112157 599 0.927 - - - - - - - - 0.927 ras homolog gene family, member Gd [Source:ZFIN;Acc:ZDB-GENE-040426-1504]
76. SPEN ENSDARG00000074245, ENSDARG00000116696 1412 0.927 - - - - - - - - 0.927 spen family transcriptional repressor [Source:ZFIN;Acc:ZDB-GENE-050309-70]
77. nr2f2 ENSDARG00000040926 5213 0.927 - - - - - - - - 0.927 nuclear receptor subfamily 2, group F, member 2 [Source:ZFIN;Acc:ZDB-GENE-990415-252]
78. cbl ENSDARG00000009958 1321 0.927 - - - - - - - - 0.927 Cbl proto-oncogene, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-041114-207]
79. epb41l5 ENSDARG00000032324, ENSDARG00000114579 1610 0.927 - - - - - - - - 0.927 erythrocyte membrane protein band 4.1 like 5 [Source:ZFIN;Acc:ZDB-GENE-030616-450]
80. dpp3 ENSDARG00000020676 2393 0.927 - - - - - - - - 0.927 dipeptidyl-peptidase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1247]
81. eefsec ENSDARG00000004696 791 0.926 - - - - - - - - 0.926 eukaryotic elongation factor, selenocysteine-tRNA-specific [Source:ZFIN;Acc:ZDB-GENE-051120-72]
82. gstm3 gstm3 1164 0.926 - - - - - - - - 0.926
83. pcloa ENSDARG00000063299 353 0.926 - - - - - - - - 0.926 piccolo presynaptic cytomatrix protein a [Source:ZFIN;Acc:ZDB-GENE-030131-8115]
84. adprhl2 ENSDARG00000019338, ENSDARG00000110712 652 0.926 - - - - - - - - 0.926 ADP-ribosylhydrolase like 2 [Source:ZFIN;Acc:ZDB-GENE-040912-85]
85. zgc:85777 ENSDARG00000027009, ENSDARG00000112673 1499 0.926 - - - - - - - - 0.926 zgc:85777 [Source:ZFIN;Acc:ZDB-GENE-040426-2210]
86. TRMT10A ENSDARG00000036678 621 0.925 - - - - - - - - 0.925 tRNA methyltransferase 10A [Source:ZFIN;Acc:ZDB-GENE-130530-594]
87. six3a ENSDARG00000058008, ENSDARG00000114971 586 0.925 - - - - - - - - 0.925 SIX homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-990415-127]
88. tmem163a ENSDARG00000079858, ENSDARG00000116870 677 0.925 - - - - - - - - 0.925 transmembrane protein 163a [Source:ZFIN;Acc:ZDB-GENE-081104-429]
89. rabif ENSDARG00000002690, ENSDARG00000114340 891 0.925 - - - - - - - - 0.925 RAB interacting factor [Source:ZFIN;Acc:ZDB-GENE-040718-216]
90. zgc:158343 ENSDARG00000099411, ENSDARG00000110524, ENSDARG00000110558, ENSDARG00000112808 1061 0.924 - - - - - - - - 0.924 zgc:158343 [Source:ZFIN;Acc:ZDB-GENE-061201-9]
91. tsc22d2 ENSDARG00000041839 1109 0.924 - - - - - - - - 0.924 TSC22 domain family 2 [Source:ZFIN;Acc:ZDB-GENE-031001-12]
92. git2b ENSDARG00000042791, ENSDARG00000111846 1332 0.924 - - - - - - - - 0.924 G protein-coupled receptor kinase interacting ArfGAP 2b [Source:ZFIN;Acc:ZDB-GENE-070112-2192]
93. klhdc4 ENSDARG00000100206, ENSDARG00000113735 2362 0.924 - - - - - - - - 0.924 kelch domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-030131-2057]
94. ncl1 2835 0.924 - - - - - - - - 0.924 nicalin, transcript variant X3
95. lmo2 ENSDARG00000095019 1098 0.924 - - - - - - - - 0.924 LIM domain only 2 (rhombotin-like 1) [Source:ZFIN;Acc:ZDB-GENE-980526-419]
96. nr1d4b ENSDARG00000059370 243 0.924 - - - - - - - - 0.924 nuclear receptor subfamily 1, group D, member 4b [Source:ZFIN;Acc:ZDB-GENE-080403-6]
97. hint2 ENSDARG00000100938 1053 0.924 - - - - - - - - 0.924 histidine triad nucleotide binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-070410-139]
98. si:ch73-109d9.1 ENSDARG00000052019 248 0.924 - - - - - - - - 0.924 si:ch73-109d9.1 [Source:ZFIN;Acc:ZDB-GENE-110411-256]
99. PPP1R21 ENSDARG00000103144 385 0.924 - - - - - - - - 0.924 protein phosphatase 1, regulatory subunit 21 [Source:ZFIN;Acc:ZDB-GENE-041114-8]
100. OTOS ENSDARG00000108475 180 0.923 - - - - - - - - 0.923 otospiralin [Source:ZFIN;Acc:ZDB-GENE-120601-1]

There are 1087 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA