Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for phgdh

Gene Name Gene ID Reads Annotation
phgdh ENSDARG00000001873 8325 phosphoglycerate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030131-647]










Genes with expression patterns similar to phgdh

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. phgdh ENSDARG00000001873 8325 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 phosphoglycerate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030131-647]
2. FP016176.1 FP016176.1 7030 2.678 - 0.734 0.949 0.995 - - - - -
3. taf7 ENSDARG00000019572 1305 2.491 0.949 0.733 - - - 0.809 - - - TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-020419-18]
4. zgc:92360 ENSDARG00000038151 2161 2.464 - - 0.959 - - - 0.772 - 0.733 zgc:92360 [Source:ZFIN;Acc:ZDB-GENE-040718-470]
5. si:ch1073-392o20.2 ENSDARG00000102599 4172 2.403 0.928 - - - - - 0.726 0.749 - si:ch1073-392o20.2 [Source:ZFIN;Acc:ZDB-GENE-091204-431]
6. ncor1 ENSDARG00000035285, ENSDARG00000113129 4234 2.394 0.944 - - - - 0.734 0.716 - - nuclear receptor corepressor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-993]
7. neo1 neo1 4056 2.31 - 0.793 - - - 0.758 - 0.759 -
8. atpif1b 8625 2.217 - - 0.760 - - 0.735 0.722 - - ATPase inhibitory factor 1b
9. apip ENSDARG00000003132 1212 1.923 0.951 - 0.972 - - - - - - APAF1 interacting protein [Source:ZFIN;Acc:ZDB-GENE-040912-128]
10. mocs2 ENSDARG00000077202, ENSDARG00000114592, ENSDARG00000114882 942 1.918 0.952 - 0.966 - - - - - - molybdenum cofactor synthesis 2 [Source:ZFIN;Acc:ZDB-GENE-110411-53]
11. uqcrq ENSDARG00000029064, ENSDARG00000116372 32190 1.916 - - 0.920 - 0.996 - - - - ubiquinol-cytochrome c reductase, complex III subunit VII [Source:ZFIN;Acc:ZDB-GENE-040718-199]
12. kras ENSDARG00000010844 2885 1.901 0.960 - 0.941 - - - - - - v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-040808-67]
13. zgc:63587 ENSDARG00000017140 8399 1.9 0.905 - - 0.995 - - - - - zgc:63587 [Source:ZFIN;Acc:ZDB-GENE-040426-1175]
14. sirt2 ENSDARG00000011488 5389 1.892 - - 0.898 0.994 - - - - - sirtuin 2 (silent mating type information regulation 2, homolog) 2 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-1028]
15. ywhah ENSDARG00000005560 11079 1.892 - - 0.898 0.994 - - - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide [Source:ZFIN;Acc:ZDB-GENE-040426-2191]
16. cant1a ENSDARG00000012192 1324 1.882 0.936 - 0.946 - - - - - - calcium activated nucleotidase 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2441]
17. nop2 ENSDARG00000043304 2511 1.869 0.931 - 0.938 - - - - - - NOP2 nucleolar protein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-050309-7]
18. rap1gap ENSDARG00000056554, ENSDARG00000110356 1284 1.83 - 0.870 0.960 - - - - - - RAP1 GTPase activating protein [Source:ZFIN;Acc:ZDB-GENE-080402-9]
19. hoxb7a ENSDARG00000056030 1212 1.825 0.956 - - - - 0.869 - - - homeobox B7a [Source:ZFIN;Acc:ZDB-GENE-000329-2]
20. gpd1b ENSDARG00000043180 6002 1.821 - - - 0.992 - - 0.829 - - glycerol-3-phosphate dehydrogenase 1b [Source:ZFIN;Acc:ZDB-GENE-030131-3906]
21. rbb4 rbb4 15541 1.815 0.816 - - - 0.999 - - - -
22. zgc:158409 zgc:158409 21963 1.814 - - - - 0.993 0.821 - - -
23. ikbkg ENSDARG00000017037 1225 1.807 - - 0.968 - - - - - 0.839 inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma [Source:ZFIN;Acc:ZDB-GENE-050327-68]
24. shc1 ENSDARG00000075437 3278 1.807 - - 0.962 - - - 0.845 - - SHC (Src homology 2 domain containing) transforming protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2538]
25. ctps1a ENSDARG00000030700 3868 1.806 0.883 - 0.923 - - - - - - CTP synthase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-808]
26. cx30.3 ENSDARG00000042707, ENSDARG00000116331 2399 1.775 - - 0.975 - - - - 0.800 - connexin 30.3 [Source:ZFIN;Acc:ZDB-GENE-040406-1]
27. gabarapl2 ENSDARG00000027200 5120 1.774 0.965 - - - - - 0.809 - - GABA(A) receptor-associated protein like 2 [Source:ZFIN;Acc:ZDB-GENE-040718-336]
28. nsfb ENSDARG00000038991, ENSDARG00000109915 1443 1.768 0.951 - - - - - - - 0.817 N-ethylmaleimide-sensitive factor b [Source:ZFIN;Acc:ZDB-GENE-050808-1]
29. vps35 ENSDARG00000008224 13245 1.758 - - - - 0.991 0.767 - - - vacuolar protein sorting 35 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-2042]
30. cwc25 ENSDARG00000003382 2134 1.757 - - 0.962 - - 0.795 - - - CWC25 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-2817]
31. yipf5 ENSDARG00000007279 2334 1.754 - - 0.969 - - - - - 0.785 Yip1 domain family, member 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1057]
32. dctn3 ENSDARG00000041363 3351 1.753 - 0.772 0.981 - - - - - - dynactin 3 (p22) [Source:ZFIN;Acc:ZDB-GENE-040704-65]
33. zc4h2 ENSDARG00000015314, ENSDARG00000112180 5141 1.749 0.929 - - - - 0.820 - - - zinc finger, C4H2 domain containing [Source:ZFIN;Acc:ZDB-GENE-030131-2207]
34. atp5h 18018 1.746 - 0.750 - - 0.996 - - - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit d, transcript variant X1
35. clint1a ENSDARG00000025535 4965 1.736 - - 0.928 - - - - - 0.808 clathrin interactor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2590]
36. phlda2 ENSDARG00000042874, ENSDARG00000114844 3876 1.735 0.855 - 0.880 - - - - - - pleckstrin homology-like domain, family A, member 2 [Source:ZFIN;Acc:ZDB-GENE-050522-73]
37. ppp1r14c ENSDARG00000077341 1587 1.729 - - 0.972 - - 0.757 - - - protein phosphatase 1, regulatory (inhibitor) subunit 14C [Source:ZFIN;Acc:ZDB-GENE-050706-92]
38. ppp5c ENSDARG00000034313 8794 1.726 - - - - 0.998 0.728 - - - protein phosphatase 5, catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-050327-75]
39. cox8a ENSDARG00000095273 60672 1.725 0.787 - - 0.938 - - - - - cytochrome c oxidase subunit 8A [Source:ZFIN;Acc:ZDB-GENE-030131-9136]
40. hint3 ENSDARG00000074286 1015 1.724 - - 0.971 - - 0.753 - - - histidine triad nucleotide binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-100922-168]
41. fndc3ba ENSDARG00000078179 2753 1.716 - - 0.966 - - - - 0.750 - fibronectin type III domain containing 3Ba [Source:ZFIN;Acc:ZDB-GENE-070510-1]
42. abracl ENSDARG00000042876 10208 1.712 0.902 - - - - - 0.810 - - ABRA C-terminal like [Source:ZFIN;Acc:ZDB-GENE-030131-8594]
43. wdr3 ENSDARG00000011079 1403 1.711 0.950 0.761 - - - - - - - WD repeat domain 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9830]
44. yipf3 ENSDARG00000020449 3312 1.711 - - - 0.995 - - - 0.716 - Yip1 domain family, member 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6443]
45. tctex1d1 ENSDARG00000103545 409 1.71 0.955 - - - - - - - 0.755 Tctex1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040912-49]
46. ncalda ENSDARG00000070688 5069 1.707 - 0.708 - - 0.999 - - - - neurocalcin delta a [Source:ZFIN;Acc:ZDB-GENE-080220-28]
47. dtna ENSDARG00000031015 1746 1.706 - 0.879 - - - 0.827 - - - dystrobrevin, alpha [Source:ZFIN;Acc:ZDB-GENE-070117-2]
48. TMEM150A_2 TMEM150A_2 739 1.706 0.953 - - - - - - 0.753 -
49. cct8 ENSDARG00000008243 6843 1.705 - 0.829 0.876 - - - - - - chaperonin containing TCP1, subunit 8 (theta) [Source:ZFIN;Acc:ZDB-GENE-040426-876]
50. ehd1a ENSDARG00000098853 1092 1.705 - - 0.966 - - - 0.739 - - EH-domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2518]
51. CCDC86 CCDC86 2023 1.704 - 0.740 0.964 - - - - - -
52. CABZ01111990.1 CABZ01111990.1 4374 1.704 - 0.708 - 0.996 - - - - -
53. galnt1 ENSDARG00000061335 1648 1.704 - 0.731 0.973 - - - - - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2360]
54. brd7 ENSDARG00000008380 3654 1.702 - 0.728 0.974 - - - - - - bromodomain containing 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2687]
55. her6 ENSDARG00000006514, ENSDARG00000111099 7477 1.702 0.941 0.761 - - - - - - - hairy-related 6 [Source:ZFIN;Acc:ZDB-GENE-980526-144]
56. pvrl2l ENSDARG00000063390 1112 1.701 - - 0.966 - - - 0.735 - - poliovirus receptor-related 2 like [Source:ZFIN;Acc:ZDB-GENE-060503-249]
57. snx1a ENSDARG00000071031 3975 1.701 0.952 - - - - - - 0.749 - sorting nexin 1a [Source:ZFIN;Acc:ZDB-GENE-060302-3]
58. snap25a ENSDARG00000020609 4537 1.7 - - - - 0.999 0.701 - - - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
59. pno1 ENSDARG00000008502 4547 1.699 - 0.804 0.895 - - - - - - partner of NOB1 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1419]
60. mapk12a ENSDARG00000042021 1573 1.698 - - 0.971 - - - - 0.727 - mitogen-activated protein kinase 12a [Source:ZFIN;Acc:ZDB-GENE-990415-257]
61. taf6l ENSDARG00000079684 1408 1.696 0.952 0.744 - - - - - - - TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-6789]
62. elovl7b ENSDARG00000100185 2032 1.694 - - 0.974 - - - 0.720 - - ELOVL fatty acid elongase 7b [Source:ZFIN;Acc:ZDB-GENE-030131-5485]
63. esyt2a ENSDARG00000030824 1907 1.694 - - 0.951 - - - 0.743 - - extended synaptotagmin-like protein 2a [Source:ZFIN;Acc:ZDB-GENE-070912-588]
64. impdh1b ENSDARG00000029524 7472 1.691 - 0.805 - - - 0.886 - - - IMP (inosine 5'-monophosphate) dehydrogenase 1b [Source:ZFIN;Acc:ZDB-GENE-030219-206]
65. CU633744.1 CU633744.1 2074 1.691 0.945 - - - - - 0.746 - -
66. fbxo28 ENSDARG00000027159 9602 1.69 - - - - 0.989 - 0.701 - - F-box protein 28 [Source:ZFIN;Acc:ZDB-GENE-030131-4665]
67. emc2 ENSDARG00000003308, ENSDARG00000114541 7141 1.689 0.856 0.833 - - - - - - - ER membrane protein complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040625-82]
68. tenm3 ENSDARG00000005479 3799 1.688 0.936 - - - - 0.752 - - - teneurin transmembrane protein 3 [Source:ZFIN;Acc:ZDB-GENE-990714-19]
69. SERP1_1 ENSDARG00000076223 6668 1.688 0.900 - - - - - 0.788 - - stress associated endoplasmic reticulum protein 1 [Source:HGNC Symbol;Acc:HGNC:10759]
70. ELMSAN1_1 ELMSAN1_1 1337 1.688 0.953 - - - - - - - 0.735
71. si:dkey-54g2.6 si:dkey-54g2.6 252 1.687 - - 0.973 - - 0.714 - - -
72. ino80db ENSDARG00000062226 504 1.682 0.957 - - - - 0.725 - - - INO80 complex subunit Db [Source:ZFIN;Acc:ZDB-GENE-070112-2072]
73. sarnp ENSDARG00000059357 4768 1.681 - 0.720 0.961 - - - - - - SAP domain containing ribonucleoprotein [Source:ZFIN;Acc:ZDB-GENE-050522-161]
74. sqrdl 1598 1.68 0.968 - - - - - 0.712 - - sulfide quinone reductase-like (yeast), transcript variant X2
75. dnajc10 ENSDARG00000074727 1523 1.676 - - 0.965 - - 0.711 - - - DnaJ (Hsp40) homolog, subfamily C, member 10 [Source:ZFIN;Acc:ZDB-GENE-070327-1]
76. C18H12orf23 C18H12orf23 5362 1.675 - 0.748 0.927 - - - - - -
77. tax1bp1b ENSDARG00000056856 4526 1.674 - - 0.960 - - - 0.714 - - Tax1 (human T-cell leukemia virus type I) binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2872]
78. FBXW7 ENSDARG00000060994 1675 1.671 - 0.701 0.970 - - - - - - F-box and WD repeat domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-090313-79]
79. usb1 ENSDARG00000003841 524 1.67 - 0.866 - - - 0.804 - - - U6 snRNA biogenesis 1 [Source:ZFIN;Acc:ZDB-GENE-040801-197]
80. tead1a ENSDARG00000028159 3574 1.669 - 0.717 0.952 - - - - - - TEA domain family member 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2101]
81. hdgfrp2 7462 1.668 - 0.879 - - - 0.789 - - - hepatoma-derived growth factor-related protein 2, transcript variant X1
82. nfya ENSDARG00000042004, ENSDARG00000114231 6606 1.668 0.948 - - - - 0.720 - - - nuclear transcription factor Y, alpha [Source:ZFIN;Acc:ZDB-GENE-010501-1]
83. get4 ENSDARG00000024398 1818 1.667 0.937 0.730 - - - - - - - golgi to ER traffic protein 4 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5399]
84. perp ENSDARG00000063572 6423 1.667 0.926 - - - - - 0.741 - - PERP, TP53 apoptosis effector [Source:ZFIN;Acc:ZDB-GENE-050104-1]
85. s100a10b ENSDARG00000025254 25240 1.666 - - - 0.885 - - 0.781 - - S100 calcium binding protein A10b [Source:ZFIN;Acc:ZDB-GENE-040426-1937]
86. psmc1a ENSDARG00000030537 2799 1.666 0.934 0.732 - - - - - - - proteasome 26S subunit, ATPase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8730]
87. wbscr16 wbscr16 791 1.665 0.952 - - - - - - - 0.713
88. zgc:77086 ENSDARG00000014015 4908 1.664 - 0.709 0.955 - - - - - - zgc:77086 [Source:ZFIN;Acc:ZDB-GENE-040426-2238]
89. ryr1a ENSDARG00000011422 2377 1.663 0.955 0.708 - - - - - - - ryanodine receptor 1a (skeletal) [Source:ZFIN;Acc:ZDB-GENE-020108-2]
90. fbxo45 ENSDARG00000071492, ENSDARG00000111553 732 1.663 0.956 - - - - 0.707 - - - F-box protein 45 [Source:ZFIN;Acc:ZDB-GENE-040426-1450]
91. cd99l2 ENSDARG00000056722 5036 1.662 - 0.816 - - - 0.846 - - - CD99 molecule-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1986]
92. lsm8 ENSDARG00000091656, ENSDARG00000111914 2751 1.66 0.941 - - - - 0.719 - - - LSM8 homolog, U6 small nuclear RNA associated [Source:ZFIN;Acc:ZDB-GENE-070629-3]
93. cers5 ENSDARG00000002365 2540 1.651 0.929 - - - - - 0.722 - - ceramide synthase 5 [Source:ZFIN;Acc:ZDB-GENE-030131-1740]
94. atl3 ENSDARG00000004270 2806 1.645 0.936 - - - - - - - 0.709 atlastin 3 [Source:ZFIN;Acc:ZDB-GENE-041010-109]
95. fgfr2 ENSDARG00000058115 6743 1.643 0.941 - - - - - 0.702 - - fibroblast growth factor receptor 2 [Source:ZFIN;Acc:ZDB-GENE-030323-1]
96. ecm2 ENSDARG00000071549 1527 1.641 - - 0.934 - - - - - 0.707 extracellular matrix protein 2, female organ and adipocyte specific [Source:ZFIN;Acc:ZDB-GENE-050208-651]
97. denr ENSDARG00000037229 8370 1.638 0.833 - 0.805 - - - - - - density-regulated protein [Source:ZFIN;Acc:ZDB-GENE-040718-450]
98. sgcb ENSDARG00000052341 4168 1.634 0.930 0.704 - - - - - - - sarcoglycan, beta (dystrophin-associated glycoprotein) [Source:ZFIN;Acc:ZDB-GENE-030131-6695]
99. elovl6 ENSDARG00000004402, ENSDARG00000114205 2286 1.63 0.917 - - - - - 0.713 - - ELOVL fatty acid elongase 6 [Source:ZFIN;Acc:ZDB-GENE-030114-1]
100. lepre1 lepre1 5346 1.629 - 0.760 0.869 - - - - - -

There are 2495 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA