Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for phf20b

Gene Name Gene ID Reads Annotation
phf20b ENSDARG00000038737, ENSDARG00000111662, ENSDARG00000116554 1385 PHD finger protein 20, b [Source:ZFIN;Acc:ZDB-GENE-040822-33]










Genes with expression patterns similar to phf20b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. phf20b ENSDARG00000038737, ENSDARG00000111662, ENSDARG00000116554 1385 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 PHD finger protein 20, b [Source:ZFIN;Acc:ZDB-GENE-040822-33]
2. zgc:110540 ENSDARG00000054929 2154 2.268 - 0.786 - - - - - 0.754 0.728 zgc:110540 [Source:ZFIN;Acc:ZDB-GENE-050327-77]
3. marcksa ENSDARG00000004049 2518 2.248 - - - 0.723 - - - 0.792 0.733 myristoylated alanine-rich protein kinase C substrate a [Source:ZFIN;Acc:ZDB-GENE-050522-145]
4. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 2.246 - - 0.702 - - - - 0.736 0.808 cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
5. TAF15 ENSDARG00000070019 5102 2.237 - - 0.710 - - - - 0.747 0.780 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-061215-102]
6. cmtm6 ENSDARG00000099631 641 1.715 0.901 - - - - - 0.814 - - CKLF-like MARVEL transmembrane domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-030729-15]
7. zgc:110626 ENSDARG00000053159 1124 1.711 0.917 0.794 - - - - - - - zgc:110626 [Source:ZFIN;Acc:ZDB-GENE-050417-447]
8. wdr74 ENSDARG00000061993, ENSDARG00000111467, ENSDARG00000115634 416 1.708 0.904 0.804 - - - - - - - WD repeat domain 74 [Source:ZFIN;Acc:ZDB-GENE-060929-1138]
9. bub1 ENSDARG00000077029 634 1.707 0.924 0.783 - - - - - - - BUB1 mitotic checkpoint serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-081104-75]
10. sox4a ENSDARG00000004588, ENSDARG00000096389 2213 1.706 0.941 - - - - - - 0.765 - SRY (sex determining region Y)-box 4a [Source:ZFIN;Acc:ZDB-GENE-030131-8290]
11. zgc:66475 ENSDARG00000099519 1348 1.679 0.944 0.735 - - - - - - - zgc:66475 [Source:ZFIN;Acc:ZDB-GENE-040426-1644]
12. lzic ENSDARG00000055899 638 1.675 0.919 - - - - - - 0.756 - leucine zipper and CTNNBIP1 domain containing [Source:ZFIN;Acc:ZDB-GENE-040718-342]
13. mto1 ENSDARG00000055679 859 1.659 0.921 - - - - 0.738 - - - mitochondrial tRNA translation optimization 1 [Source:ZFIN;Acc:ZDB-GENE-070209-253]
14. ankrd10b ENSDARG00000004771 654 1.642 0.938 0.704 - - - - - - - ankyrin repeat domain 10b [Source:ZFIN;Acc:ZDB-GENE-061013-49]
15. lsm7 ENSDARG00000058328 7191 1.632 0.861 - - - - - - - 0.771 LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-030131-8284]
16. zc4h2 ENSDARG00000015314, ENSDARG00000112180 5141 1.628 - - 0.793 - - - - 0.835 - zinc finger, C4H2 domain containing [Source:ZFIN;Acc:ZDB-GENE-030131-2207]
17. smarcc1a ENSDARG00000017397 2957 1.624 0.779 - - - - - 0.845 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1a [Source:ZFIN;Acc:ZDB-GENE-080514-3]
18. ccnk ENSDARG00000034146 1255 1.622 0.898 - - - - - - 0.724 - cyclin K [Source:ZFIN;Acc:ZDB-GENE-030131-5126]
19. MAP3K6 MAP3K6 181 1.617 0.894 - - - - 0.723 - - -
20. EPS8L2 ENSDARG00000058108 484 1.614 0.907 - - - - - 0.707 - - EPS8 like 2 [Source:ZFIN;Acc:ZDB-GENE-131121-340]
21. swt1 ENSDARG00000094010 472 1.606 0.903 - - - - - 0.703 - - SWT1 RNA endoribonuclease homolog [Source:ZFIN;Acc:ZDB-GENE-041015-373]
22. usp49 ENSDARG00000000229 706 1.599 0.893 - - 0.706 - - - - - ubiquitin specific peptidase 49 [Source:ZFIN;Acc:ZDB-GENE-050208-484]
23. zc3h15 ENSDARG00000015889 3861 1.597 0.776 - - - - - 0.821 - - zinc finger CCCH-type containing 15 [Source:ZFIN;Acc:ZDB-GENE-030131-6239]
24. wdr47a ENSDARG00000078136 522 1.589 - 0.818 - - - - 0.771 - - WD repeat domain 47a [Source:ZFIN;Acc:ZDB-GENE-070216-3]
25. pou3f2b ENSDARG00000076262, ENSDARG00000112713 2439 1.582 - - - 0.724 - - - 0.858 - POU class 3 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-370]
26. zc2hc1a ENSDARG00000027915, ENSDARG00000112745 974 1.574 0.873 - - - - - - 0.701 - zinc finger, C2HC-type containing 1A [Source:ZFIN;Acc:ZDB-GENE-030131-3132]
27. G3BP2_1 G3BP2_1 2390 1.572 0.823 - - 0.749 - - - - -
28. rbm25 rbm25 3629 1.571 - 0.856 - - - - - - 0.715
29. kdm4b ENSDARG00000099675 2037 1.568 0.865 - - - - - - 0.703 - lysine (K)-specific demethylase 4B [Source:ZFIN;Acc:ZDB-GENE-060503-664]
30. abca1a ENSDARG00000074635 1085 1.568 0.850 - - - - - - 0.718 - ATP-binding cassette, sub-family A (ABC1), member 1A [Source:ZFIN;Acc:ZDB-GENE-031006-12]
31. si:dkeyp-113d7.10 ENSDARG00000092359 1585 1.562 - - - - - - - 0.859 0.703 si:dkeyp-113d7.10 [Source:ZFIN;Acc:ZDB-GENE-061207-80]
32. nat8l ENSDARG00000077256, ENSDARG00000115322 3513 1.561 - - 0.710 - - - - 0.851 - N-acetyltransferase 8-like [Source:ZFIN;Acc:ZDB-GENE-030729-4]
33. mex3b ENSDARG00000058369 1867 1.559 - - - 0.849 - - - 0.710 - mex-3 RNA binding family member B [Source:ZFIN;Acc:ZDB-GENE-030131-2628]
34. wnt6b ENSDARG00000073935 236 1.558 0.800 - - - - - 0.758 - - wingless-type MMTV integration site family, member 6b [Source:ZFIN;Acc:ZDB-GENE-070912-513]
35. IL17RD ENSDARG00000098359 2309 1.55 0.761 - - - - - 0.789 - - interleukin 17 receptor D [Source:ZFIN;Acc:ZDB-GENE-020320-5]
36. CABZ01080568.2 CABZ01080568.2 2137 1.548 - 0.754 - - - - - 0.794 -
37. hmgb1a ENSDARG00000099175, ENSDARG00000114353 17231 1.547 - - - - - - - 0.822 0.725 high mobility group box 1a [Source:ZFIN;Acc:ZDB-GENE-030131-341]
38. kmt2a ENSDARG00000004537 2169 1.543 - 0.758 0.785 - - - - - - lysine (K)-specific methyltransferase 2A [Source:ZFIN;Acc:ZDB-GENE-080521-3]
39. arhgap24 ENSDARG00000100973 1105 1.542 - 0.795 - - - - 0.747 - - Rho GTPase activating protein 24 [Source:ZFIN;Acc:ZDB-GENE-091118-20]
40. polr2d ENSDARG00000076509 3386 1.541 0.801 - - - - - - - 0.740 polymerase (RNA) II (DNA directed) polypeptide D [Source:ZFIN;Acc:ZDB-GENE-040714-2]
41. igf1ra ENSDARG00000027423, ENSDARG00000113936, ENSDARG00000116846 2228 1.54 0.798 - - - - - - 0.742 - insulin-like growth factor 1a receptor [Source:ZFIN;Acc:ZDB-GENE-020503-1]
42. zbtb18 ENSDARG00000028228 3653 1.536 - - - - - - - 0.810 0.726 zinc finger and BTB domain containing 18 [Source:ZFIN;Acc:ZDB-GENE-050419-73]
43. gmpr2 ENSDARG00000061301 1132 1.536 - 0.833 - - - - 0.703 - - guanosine monophosphate reductase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1238]
44. scn3b ENSDARG00000062359 242 1.528 - - - - - - 0.712 0.816 - sodium channel, voltage-gated, type III, beta [Source:ZFIN;Acc:ZDB-GENE-070920-2]
45. tubgcp3 ENSDARG00000029133, ENSDARG00000116225 525 1.526 - 0.719 - - - - 0.807 - - tubulin, gamma complex associated protein 3 [Source:ZFIN;Acc:ZDB-GENE-030616-538]
46. dhx9 ENSDARG00000079725 1241 1.523 - - - 0.754 - - - 0.769 - DEAH (Asp-Glu-Ala-His) box helicase 9 [Source:ZFIN;Acc:ZDB-GENE-070912-171]
47. CR848032.1 ENSDARG00000102710 338 1.522 - 0.744 - - - - 0.778 - -
48. tia1 ENSDARG00000052536, ENSDARG00000114478 4392 1.522 - - 0.720 - - - - 0.802 - TIA1 cytotoxic granule-associated RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-1506]
49. midn ENSDARG00000018524 7559 1.516 - 0.716 - - - - - 0.800 - midnolin [Source:ZFIN;Acc:ZDB-GENE-030131-2433]
50. zgc:113348 ENSDARG00000103795 1351 1.516 - - - - - 0.714 - 0.802 - zgc:113348 [Source:ZFIN;Acc:ZDB-GENE-050227-10]
51. gpm6ab ENSDARG00000004621 5825 1.51 0.757 - - - - - - 0.753 - glycoprotein M6Ab [Source:ZFIN;Acc:ZDB-GENE-030710-8]
52. magoh ENSDARG00000038635, ENSDARG00000109837 2880 1.498 - - - - - - 0.706 0.792 - mago homolog, exon junction complex subunit [Source:ZFIN;Acc:ZDB-GENE-041216-1]
53. fam60al 2846 1.497 - - 0.718 - - - - 0.779 - family with sequence similarity 60, member A, like
54. ttc39c ENSDARG00000102308, ENSDARG00000115554 748 1.494 - - - - - 0.771 - 0.723 - tetratricopeptide repeat domain 39C [Source:ZFIN;Acc:ZDB-GENE-050522-194]
55. ZFHX3 ENSDARG00000103057 7759 1.491 - - - 0.753 - - - 0.738 - zinc finger homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7577]
56. wdr5 ENSDARG00000016903 4834 1.49 - - - - - - - 0.772 0.718 WD repeat domain 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2082]
57. srrm1 ENSDARG00000001244 4972 1.489 - - 0.737 0.752 - - - - - serine/arginine repetitive matrix 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2789]
58. tpt1 ENSDARG00000092693 1110 1.477 - 0.769 - 0.708 - - - - - tumor protein, translationally-controlled 1 [Source:ZFIN;Acc:ZDB-GENE-990603-10]
59. smc2 ENSDARG00000017744, ENSDARG00000114076 2271 1.476 - - - 0.752 - - - - 0.724 structural maintenance of chromosomes 2 [Source:ZFIN;Acc:ZDB-GENE-030131-105]
60. AMBRA1 AMBRA1 382 1.475 - - - - - 0.721 0.754 - -
61. 5S_rRNA_21 5S_rRNA_21 1323 1.474 - - - - - - 0.729 0.745 -
62. CHD1 ENSDARG00000103787 1645 1.474 - - 0.725 - - - - 0.749 - chromodomain helicase DNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7120]
63. tjp3 ENSDARG00000002909 1978 1.471 0.763 - - - - - 0.708 - - tight junction protein 3 [Source:ZFIN;Acc:ZDB-GENE-030828-10]
64. edc4 ENSDARG00000062266, ENSDARG00000114070 2505 1.47 - - - 0.737 - 0.733 - - - enhancer of mRNA decapping 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5032]
65. RAB33A ENSDARG00000057394, ENSDARG00000115279 380 1.469 - - - - - - 0.700 0.769 - RAB33A, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-060825-283]
66. cadpsa ENSDARG00000043661 160 1.466 - - - - - - 0.712 0.754 - Ca2+-dependent activator protein for secretion a [Source:ZFIN;Acc:ZDB-GENE-030616-525]
67. parp1 ENSDARG00000019529 6787 1.466 - - - - - - - 0.755 0.711 poly (ADP-ribose) polymerase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3955]
68. BX085195.1 BX085195.1 995 1.465 - - - - - 0.756 - - 0.709
69. lbr ENSDARG00000014013 4835 1.465 0.702 - - - - - - - 0.763 lamin B receptor [Source:ZFIN;Acc:ZDB-GENE-030804-11]
70. nup188 ENSDARG00000030022 2398 1.462 - 0.705 - 0.757 - - - - - nucleoporin 188 [Source:ZFIN;Acc:ZDB-GENE-030131-7184]
71. hic1l ENSDARG00000045660 1489 1.46 - - - - - 0.714 - 0.746 - hypermethylated in cancer 1 like [Source:ZFIN;Acc:ZDB-GENE-030620-1]
72. kctd6b ENSDARG00000023703, ENSDARG00000116734 2621 1.458 - - - - - - 0.721 - 0.737 potassium channel tetramerization domain containing 6b [Source:ZFIN;Acc:ZDB-GENE-040718-14]
73. ctnnb1 ENSDARG00000014571 12004 1.456 - - 0.715 - - - - 0.741 - catenin (cadherin-associated protein), beta 1 [Source:ZFIN;Acc:ZDB-GENE-980526-362]
74. thoc6 ENSDARG00000037966, ENSDARG00000110342, ENSDARG00000116948 554 1.451 - - - - - - - 0.743 0.708 THO complex 6 [Source:ZFIN;Acc:ZDB-GENE-041010-198]
75. anxa4 ENSDARG00000036456 3332 1.447 0.713 0.734 - - - - - - - annexin A4 [Source:ZFIN;Acc:ZDB-GENE-030707-1]
76. suv39h1b ENSDARG00000055753 1540 1.442 - - - 0.741 - - - 0.701 - suppressor of variegation 3-9 homolog 1b [Source:ZFIN;Acc:ZDB-GENE-030131-5105]
77. ilf2 ENSDARG00000014591 14543 1.432 - - - - - - - 0.714 0.718 interleukin enhancer binding factor 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2345]
78. CR457447.1 ENSDARG00000097243 693 1.428 - - - - - 0.709 - 0.719 - uncharacterized LOC110437905 [Source:NCBI gene;Acc:110437905]
79. aif1l ENSDARG00000009336 1340 1.428 - - - - - - - 0.719 0.709 allograft inflammatory factor 1-like [Source:ZFIN;Acc:ZDB-GENE-030131-9646]
80. plp1a ENSDARG00000103732 3544 1.422 - - - 0.716 - - - 0.706 - proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
81. GTF3C1 GTF3C1 836 1.419 - 0.713 - - - - 0.706 - -
82. lppr3a lppr3a 1294 1.419 - - - 0.713 - - - - 0.706
83. actl6a ENSDARG00000070828, ENSDARG00000115348 1961 1.416 - - - - - - 0.713 - 0.703 actin-like 6A [Source:ZFIN;Acc:ZDB-GENE-020419-36]
84. si:ch211-120j21.1 si:ch211-120j21.1 638 0.957 0.957 - - - - - - - -
85. pcnxl3 pcnxl3 756 0.954 0.954 - - - - - - - -
86. gpcpd1 ENSDARG00000016011 2563 0.948 0.948 - - - - - - - - glycerophosphocholine phosphodiesterase 1 [Source:ZFIN;Acc:ZDB-GENE-060503-472]
87. map3k7 ENSDARG00000020469 2845 0.945 0.945 - - - - - - - - mitogen-activated protein kinase kinase kinase 7 [Source:ZFIN;Acc:ZDB-GENE-041001-135]
88. efnb2b ENSDARG00000074050 77 0.945 0.945 - - - - - - - - ephrin-B2b [Source:ZFIN;Acc:ZDB-GENE-010618-1]
89. MRPL52 ENSDARG00000090568 4402 0.943 0.943 - - - - - - - - mitochondrial ribosomal protein L52 [Source:ZFIN;Acc:ZDB-GENE-110325-1]
90. iah1 ENSDARG00000015765 326 0.942 0.942 - - - - - - - - isoamyl acetate hydrolyzing esterase 1 (putative) [Source:ZFIN;Acc:ZDB-GENE-041008-186]
91. kifc3 ENSDARG00000054978 1220 0.94 0.940 - - - - - - - - kinesin family member C3 [Source:ZFIN;Acc:ZDB-GENE-030131-3724]
92. tax1bp3 ENSDARG00000059177 4324 0.939 0.939 - - - - - - - - Tax1 (human T-cell leukemia virus type I) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2830]
93. synj2bp ENSDARG00000028321 1143 0.939 0.939 - - - - - - - - synaptojanin 2 binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-6531]
94. grp ENSDARG00000043074 747 0.939 0.939 - - - - - - - - gastrin-releasing peptide [Source:ZFIN;Acc:ZDB-GENE-060526-117]
95. mat2al ENSDARG00000063665, ENSDARG00000109637, ENSDARG00000111463 447 0.938 0.938 - - - - - - - - methionine adenosyltransferase II, alpha-like [Source:ZFIN;Acc:ZDB-GENE-060421-5255]
96. rhov ENSDARG00000070434 808 0.937 0.937 - - - - - - - - ras homolog family member V [Source:ZFIN;Acc:ZDB-GENE-031002-10]
97. zgc:162946 zgc:162946 74 0.937 0.937 - - - - - - - -
98. prdm9 ENSDARG00000005382, ENSDARG00000110150 572 0.936 0.936 - - - - - - - - PR domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-040426-1319]
99. C11H19orf25 C11H19orf25 491 0.934 0.934 - - - - - - - -
100. commd2 ENSDARG00000003373 540 0.933 0.933 - - - - - - - - COMM domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040718-118]

There are 1185 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA