Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for phc3

Gene Name Gene ID Reads Annotation
phc3 ENSDARG00000074604 2 polyhomeotic homolog 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-070912-369]










Genes with expression patterns similar to phc3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. phc3 ENSDARG00000074604 2 5 - - 1.000 1.000 1.000 - - 1.000 1.000 polyhomeotic homolog 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-070912-369]
2. phox2ba ENSDARG00000075330 1 2 - - - 1.000 - - - - 1.000 paired-like homeobox 2ba [Source:ZFIN;Acc:ZDB-GENE-090313-51]
3. kiss1 ENSDARG00000075829 4 2 - - - 1.000 1.000 - - - - KiSS-1 metastasis suppressor [Source:ZFIN;Acc:ZDB-GENE-080128-1]
4. zgc:173708 zgc:173708 2 2 - - - - 1.000 - - - 1.000
5. or137-8 ENSDARG00000105705 1 2 - - - 1.000 - - - - 1.000 odorant receptor, family H, subfamily 137, member 8 [Source:ZFIN;Acc:ZDB-GENE-070806-28]
6. si:ch211-153j24.3 ENSDARG00000068428 0 2 - - - - 1.000 - - - 1.000 si:ch211-153j24.3 [Source:ZFIN;Acc:ZDB-GENE-041014-38]
7. zgc:171731 ENSDARG00000014657, ENSDARG00000112592 5 2 - - - 1.000 - - - - 1.000 zgc:171731 [Source:ZFIN;Acc:ZDB-GENE-071004-27]
8. CABZ01001466.1 CABZ01001466.1 1 2 - - - 1.000 1.000 - - - -
9. PDILT PDILT 6 2 - - - 1.000 - - - - 1.000
10. BICD2_1 BICD2_1 18 2 - - - 1.000 - - - 1.000 -
11. DTWD2 ENSDARG00000101873 1 2 - - - - 1.000 - - 1.000 - DTW domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-120215-183]
12. MYO7B MYO7B 8 1.918 - - 0.918 - 1.000 - - - -
13. ptger2a ENSDARG00000011434 6 1.864 - - 0.864 - 1.000 - - - - prostaglandin E receptor 2a (subtype EP2) [Source:ZFIN;Acc:ZDB-GENE-040426-1321]
14. gnrh3 ENSDARG00000056214, ENSDARG00000112890 226 1.856 - - - 0.856 1.000 - - - - gonadotropin-releasing hormone 3 [Source:ZFIN;Acc:ZDB-GENE-030724-4]
15. trim62 ENSDARG00000060901 12 1.817 - - - 0.817 1.000 - - - - tripartite motif containing 62 [Source:ZFIN;Acc:ZDB-GENE-070112-502]
16. or111-11 ENSDARG00000041019 5 1.813 - - - - 1.000 - - - 0.813 odorant receptor, family D, subfamily 111, member 11 [Source:ZFIN;Acc:ZDB-GENE-010308-10]
17. ccdc14 ENSDARG00000098734 3 1.811 - - - 0.811 1.000 - - - - coiled-coil domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-120215-134]
18. CCDC74B CCDC74B 8 1.731 - - - 0.731 1.000 - - - -
19. HTR7 17 1.678 - - 0.918 - - - - - 0.760 5-hydroxytryptamine receptor 7
20. si:ch211-181d7.1 ENSDARG00000088274, ENSDARG00000091847 18 1.609 - - 0.728 0.881 - - - - - si:ch211-181d7.1 [Source:ZFIN;Acc:ZDB-GENE-121214-14]
21. SNORD15_1 SNORD15_1 1 1 - - - - 1.000 - - - -
22. CT990567.1 ENSDARG00000100384 0 1 - - - - - - - - 1.000
23. KCNMB3 KCNMB3 5 1 - - - - - - - - 1.000
24. GARNL3 GARNL3 1 1 - - - - - - - - 1.000
25. CABZ01015787.1 CABZ01015787.1 6 1 - - - - - - - 1.000 -
26. si:dkey-52j6.1 si:dkey-52j6.1 3 1 - - - - 1.000 - - - -
27. si:ch211-57f7.7 ENSDARG00000093131 8 1 - - - - - - - - 1.000 si:ch211-57f7.7 [Source:ZFIN;Acc:ZDB-GENE-090313-119]
28. Metazoa_SRP_5 Metazoa_SRP_5 2 1 - - - - - - - - 1.000
29. es1 ENSDARG00000094516 2 1 - - - 1.000 - - - - - es1 protein [Source:ZFIN;Acc:ZDB-GENE-980526-188]
30. nrn1la ENSDARG00000069368, ENSDARG00000112044, ENSDARG00000112869 16 1 - - - - 1.000 - - - - neuritin 1-like a [Source:NCBI gene;Acc:100004307]
31. nfil3-4 ENSDARG00000092346 3 1 - - - - 1.000 - - - - nuclear factor, interleukin 3 regulated, member 4 [Source:ZFIN;Acc:ZDB-GENE-070424-214]
32. CR352226.3 ENSDARG00000095872 0 1 - - - 1.000 - - - - -
33. si:dkey-14o6.7 si:dkey-14o6.7 9 1 - - - 1.000 - - - - -
34. si:ch211-12e13.12 ENSDARG00000094737 1 1 - - - - - - - 1.000 - si:ch211-12e13.12 [Source:ZFIN;Acc:ZDB-GENE-070424-121]
35. ENSDARG00000086339 ENSDARG00000086339 1 1 - - - - - - - 1.000 -
36. LRFN5 LRFN5 1 1 - - - - - - - 1.000 -
37. si:dkey-225h23.4 si:dkey-225h23.4 7 1 - - - - - - - 1.000 -
38. or137-3 ENSDARG00000070344 1 1 - - - - - - - - 1.000 odorant receptor, family H, subfamily 137, member 3 [Source:ZFIN;Acc:ZDB-GENE-070806-24]
39. U3_6 U3_6 0 1 - - - - - - - - 1.000
40. men1_1 ENSDARG00000089456 3 1 - - - - 1.000 - - - - multiple endocrine neoplasia I [Source:ZFIN;Acc:ZDB-GENE-991110-12]
41. zgc:162235 zgc:162235 9 1 - - - - 1.000 - - - -
42. rac1l ENSDARG00000054649, ENSDARG00000096549 2 1 - - - - 1.000 - - - - Rac family small GTPase 1, like [Source:ZFIN;Acc:ZDB-GENE-060315-6]
43. CU929391.2 ENSDARG00000090304 3 1 - - 1.000 - - - - - -
44. zgc:112958 zgc:112958 5 1 - - - 1.000 - - - - -
45. dand5 ENSDARG00000036471 8 1 - - - - - - - 1.000 - DAN domain family, member 5 [Source:ZFIN;Acc:ZDB-GENE-040421-2]
46. CT573356.3 CT573356.3 2 1 - - - - - - - - 1.000
47. CMA1 CMA1 0 1 - - - 1.000 - - - - -
48. CABZ01085394.1 CABZ01085394.1 0 1 - - - - 1.000 - - - -
49. si:ch211-264f5.5 si:ch211-264f5.5 2 1 - - - - - - - 1.000 -
50. si:dkey-233e3.6 si:dkey-233e3.6 1 1 - - - - - - - 1.000 -
51. CABZ01071058.1 CABZ01071058.1 4 1 - - - 1.000 - - - - -
52. si:dkey-20f20.3 si:dkey-20f20.3 7 1 - - - - - - - - 1.000
53. mrap ENSDARG00000091992 9 1 - - - - - - - - 1.000 melanocortin 2 receptor accessory protein [Source:ZFIN;Acc:ZDB-GENE-060503-387]
54. ALOX5_1 ALOX5_1 0 1 - - - - 1.000 - - - -
55. tmem174 ENSDARG00000035388 2 1 - - - - 1.000 - - - - transmembrane protein 174 [Source:ZFIN;Acc:ZDB-GENE-080819-2]
56. si:dkey-185p13.1 ENSDARG00000095837 12 1 - - - 1.000 - - - - - si:dkey-185p13.1 [Source:ZFIN;Acc:ZDB-GENE-110411-125]
57. si:ch1073-219n12.1 71 1 - - - 1.000 - - - - - si:ch1073-219n12.1, transcript variant X1
58. pi15b ENSDARG00000061292 1 1 - - - - 1.000 - - - - peptidase inhibitor 15b [Source:ZFIN;Acc:ZDB-GENE-070912-590]
59. si:dkey-71l1.1 ENSDARG00000052411 11 1 - - - - - - - - 1.000 si:dkey-71l1.1 [Source:ZFIN;Acc:ZDB-GENE-070705-489]
60. BX088718.1 ENSDARG00000101847 3 1 - - - - 1.000 - - - -
61. fam113 ENSDARG00000002685 0 1 - - - - - - - - 1.000 family with sequence similarity 113 [Source:ZFIN;Acc:ZDB-GENE-041212-23]
62. ONECUT3 ONECUT3 2 1 - - - - - - - - 1.000
63. si:ch73-138e16.7 si:ch73-138e16.7 0 1 - - - - - - - - 1.000
64. SNORD83 SNORD83 43 1 - - - - 1.000 - - - -
65. CR388413.1 ENSDARG00000100537 1 1 - - - - - - - - 1.000
66. BAI2 BAI2 0 1 - - - - 1.000 - - - -
67. CT737190.3 CT737190.3 0 1 - - - - 1.000 - - - -
68. KCNB1 ENSDARG00000060095, ENSDARG00000112775 5 1 - - - 1.000 - - - - - potassium voltage-gated channel, Shab-related subfamily, member 1 [Source:ZFIN;Acc:ZDB-GENE-090831-3]
69. or115-1 ENSDARG00000018521 1 1 - - - - - - - - 1.000 odorant receptor, family F, subfamily 115, member 1 [Source:ZFIN;Acc:ZDB-GENE-010309-2]
70. si:dkey-26i13.8 ENSDARG00000062606 13 1 - - - - - - - - 1.000 si:dkey-26i13.8 [Source:ZFIN;Acc:ZDB-GENE-090312-134]
71. si:dkey-256e7.8 ENSDARG00000092022 4 1 - - - 1.000 - - - - - si:dkey-256e7.8 [Source:ZFIN;Acc:ZDB-GENE-090313-283]
72. si:dkey-11d18.2 0 1 - - - - 1.000 - - - - si:dkey-11d18.2
73. BX323796.1 BX323796.1 2 1 - - - - 1.000 - - - -
74. dnaaf3 ENSDARG00000092662 20 1 - - - 1.000 - - - - - dynein, axonemal, assembly factor 3 [Source:ZFIN;Acc:ZDB-GENE-091204-296]
75. st3gal1l ENSDARG00000079310 10 1 - - - - 1.000 - - - - ST3 beta-galactoside alpha-2,3-sialyltransferase 1, like [Source:ZFIN;Acc:ZDB-GENE-060321-2]
76. si:dkey-6a5.3 ENSDARG00000094001 0 1 - - - - 1.000 - - - - si:dkey-6a5.3 [Source:ZFIN;Acc:ZDB-GENE-041210-128]
77. CCDC15 ENSDARG00000067517 28 1 - - - - - - - - 1.000 coiled-coil domain containing 15 [Source:ZFIN;Acc:ZDB-GENE-120411-25]
78. or111-10 ENSDARG00000091216 0 1 - - - - - - - - 1.000 odorant receptor, family D, subfamily 111, member 10 [Source:ZFIN;Acc:ZDB-GENE-000329-10]
79. BX005082.1 ENSDARG00000098558 2 1 - - - 1.000 - - - - -
80. nitr1l 0 1 - - - - - - - - 1.000 novel immune-type receptor 1l, transcript variant X2
81. KCNH2 KCNH2 1 1 - - - 1.000 - - - - -
82. BX897720.4 BX897720.4 0 1 - - - - 1.000 - - - -
83. crygm5 ENSDARG00000041179, ENSDARG00000112467 1 1 - - - - - - - - 1.000 crystallin, gamma M5 [Source:ZFIN;Acc:ZDB-GENE-041024-6]
84. fabp10a ENSDARG00000038439 4 1 - - - - 1.000 - - - - fatty acid binding protein 10a, liver basic [Source:ZFIN;Acc:ZDB-GENE-020318-1]
85. si:rp71-18l21.1 si:rp71-18l21.1 2 1 - - - - 1.000 - - - -
86. trim35-31 ENSDARG00000052097, ENSDARG00000111232 0 1 - - - - - - - 1.000 - tripartite motif containing 35-31 [Source:ZFIN;Acc:ZDB-GENE-061009-3]
87. si:dkey-101n15.3 si:dkey-101n15.3 1 1 - - - 1.000 - - - - -
88. zgc:110045 ENSDARG00000057141, ENSDARG00000110961 4 1 - - - - - - - 1.000 - zgc:110045 [Source:ZFIN;Acc:ZDB-GENE-050706-149]
89. CR382281.1 ENSDARG00000100098 135 1 - - - - 1.000 - - - -
90. si:ch211-280c16.3 0 1 - - - 1.000 - - - - - si:ch211-280c16.3
91. CABZ01080434.1 ENSDARG00000102438 4 1 - - - - 1.000 - - - -
92. si:ch211-215m21.11 si:ch211-215m21.11 2 1 - - - 1.000 - - - - -
93. BX511066.4 BX511066.4 6 1 - - - 1.000 - - - - -
94. RASSF7 RASSF7 0 1 - - - - - - - - 1.000
95. kcnq3 ENSDARG00000060085 0 1 - - - - - - - - 1.000 potassium voltage-gated channel, KQT-like subfamily, member 3 [Source:ZFIN;Acc:ZDB-GENE-070912-301]
96. SGPP2 ENSDARG00000079608 1 1 - - - - 1.000 - - - - sphingosine-1-phosphate phosphatase 2 [Source:HGNC Symbol;Acc:HGNC:19953]
97. si:dkeyp-35f12.3 si:dkeyp-35f12.3 3 1 - - - - 1.000 - - - -
98. si:dkey-94a14.1 si:dkey-94a14.1 0 1 - - - - - - - - 1.000
99. si:dkey-20j3.4 si:dkey-20j3.4 4 1 - - - - 1.000 - - - -
100. CABZ01117474.1 CABZ01117474.1 2 1 - - - - 1.000 - - - -

There are 514 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA