Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for pgd

Gene Name Gene ID Reads Annotation
pgd ENSDARG00000015343, ENSDARG00000117150 2512 phosphogluconate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-040426-2807]










Genes with expression patterns similar to pgd

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pgd ENSDARG00000015343, ENSDARG00000117150 2512 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 phosphogluconate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-040426-2807]
2. piezo1 ENSDARG00000076870 4704 2.49 - 0.824 - - - - 0.756 0.910 - piezo-type mechanosensitive ion channel component 1 [Source:ZFIN;Acc:ZDB-GENE-041111-255]
3. cbx5 ENSDARG00000061187 24026 2.379 - - - - - 0.779 0.748 0.852 - chromobox homolog 5 (HP1 alpha homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-5553]
4. CABZ01092303.1 CABZ01092303.1 8825 2.374 - - - - - 0.765 0.770 0.839 -
5. epb41l4a ENSDARG00000040087 1013 2.333 - 0.898 - - - 0.722 0.713 - - erythrocyte membrane protein band 4.1 like 4A [Source:ZFIN;Acc:ZDB-GENE-990415-20]
6. pvrl1b 1645 1.894 - 0.917 - - - - - 0.977 - poliovirus receptor-related 1b
7. brd1b ENSDARG00000051798 1712 1.868 - 0.883 - - - - - 0.985 - bromodomain containing 1b [Source:ZFIN;Acc:ZDB-GENE-070209-98]
8. nucb1 ENSDARG00000054833 2009 1.84 - 0.867 - - - - - 0.973 - nucleobindin 1 [Source:ZFIN;Acc:ZDB-GENE-060825-222]
9. CEP350 ENSDARG00000058000 2887 1.832 - 0.858 - - - - - 0.974 - centrosomal protein 350 [Source:ZFIN;Acc:ZDB-GENE-030131-6975]
10. fermt1 ENSDARG00000052652 2394 1.826 - 0.854 - - - - - 0.972 - fermitin family member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3264]
11. prickle1b ENSDARG00000045694 7536 1.825 - - - - - 0.846 - 0.979 - prickle homolog 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2152]
12. fam114a1 ENSDARG00000008287, ENSDARG00000116401 949 1.81 - 0.813 - - - - - 0.997 - family with sequence similarity 114, member A1 [Source:ZFIN;Acc:ZDB-GENE-070410-52]
13. smad9 368 1.809 - - - 0.811 - - - 0.998 - SMAD family member 9, transcript variant X1
14. si:ch211-120e1.6 si:ch211-120e1.6 292 1.748 - 0.903 - 0.845 - - - - -
15. creld2 ENSDARG00000029071, ENSDARG00000116264 333 1.746 - 0.909 - 0.837 - - - - - cysteine-rich with EGF-like domains 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1626]
16. ARID3C ENSDARG00000067729, ENSDARG00000114447 8069 1.744 - - - - - 0.788 - 0.956 - AT rich interactive domain 3C (BRIGHT-like) [Source:ZFIN;Acc:ZDB-GENE-060526-12]
17. arhgdig ENSDARG00000004034 10368 1.743 - - - - - - 0.774 0.969 - Rho GDP dissociation inhibitor (GDI) gamma [Source:ZFIN;Acc:ZDB-GENE-040426-1493]
18. cav1 ENSDARG00000103747 15519 1.742 - - - - - - 0.809 0.933 - caveolin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2415]
19. prdm9 ENSDARG00000005382, ENSDARG00000110150 572 1.732 - 0.896 - 0.836 - - - - - PR domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-040426-1319]
20. plxnb2a ENSDARG00000003811, ENSDARG00000094799 1662 1.728 - - - - - 0.734 - 0.994 - plexin b2a [Source:ZFIN;Acc:ZDB-GENE-030131-8917]
21. OTTDARG00000032278 OTTDARG00000032278 1016 1.727 - 0.925 - - - - 0.802 - -
22. copb2 ENSDARG00000038743, ENSDARG00000114286 6404 1.726 - - - - - - 0.737 0.989 - coatomer protein complex, subunit beta 2 [Source:ZFIN;Acc:ZDB-GENE-010724-7]
23. ppp2r1b ppp2r1b 3469 1.711 - 0.732 - - - - - 0.979 -
24. otud5b ENSDARG00000056840, ENSDARG00000114052 2199 1.71 - - - - - 0.719 - 0.991 - OTU deubiquitinase 5b [Source:ZFIN;Acc:ZDB-GENE-040801-50]
25. CHORDC1 CHORDC1 544 1.708 - 0.912 - 0.796 - - - - -
26. ylpm1 ENSDARG00000043680 7676 1.707 - 0.771 - - - - - 0.936 - YLP motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2196]
27. ano10a ENSDARG00000057736 1306 1.704 - - - - - - 0.719 0.985 - anoctamin 10a [Source:ZFIN;Acc:ZDB-GENE-050913-43]
28. adam10a ENSDARG00000053468 9308 1.703 - 0.900 - - - - 0.803 - - ADAM metallopeptidase domain 10a [Source:ZFIN;Acc:ZDB-GENE-040917-2]
29. acaa2 ENSDARG00000038881 2649 1.701 - - - - - - 0.719 0.982 - acetyl-CoA acyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1996]
30. smox ENSDARG00000036967 3816 1.7 - - - - - - 0.737 0.963 - spermine oxidase [Source:ZFIN;Acc:ZDB-GENE-031201-3]
31. TRIM14 TRIM14 1424 1.698 - 0.931 - 0.767 - - - - -
32. ATOX1 ENSDARG00000087693 4016 1.697 - 0.893 - - - - 0.804 - - antioxidant 1 copper chaperone [Source:ZFIN;Acc:ZDB-GENE-120720-2]
33. fbxo28 ENSDARG00000027159 9602 1.692 - - - - - - 0.755 0.937 - F-box protein 28 [Source:ZFIN;Acc:ZDB-GENE-030131-4665]
34. ARF5 ENSDARG00000070472, ENSDARG00000115687 6101 1.691 - - - - - 0.704 - 0.987 - ADP-ribosylation factor 5 [Source:ZFIN;Acc:ZDB-GENE-030910-5]
35. ankrd50l ENSDARG00000007077 1115 1.688 - 0.898 - 0.790 - - - - - ankyrin repeat domain 50-like [Source:ZFIN;Acc:ZDB-GENE-041008-117]
36. ftr67 ENSDARG00000098820 611 1.682 - 0.834 - 0.848 - - - - - finTRIM family, member 67 [Source:ZFIN;Acc:ZDB-GENE-060312-27]
37. ap1m3 ENSDARG00000039512, ENSDARG00000113914, ENSDARG00000116700 647 1.679 - 0.846 - 0.833 - - - - - adaptor related protein complex 1 subunit mu 3 [Source:ZFIN;Acc:ZDB-GENE-040801-159]
38. smim14 ENSDARG00000005799, ENSDARG00000110934 1094 1.679 - - - - - - 0.701 0.978 - small integral membrane protein 14 [Source:ZFIN;Acc:ZDB-GENE-040426-22]
39. sec22a ENSDARG00000078328 1207 1.673 - 0.939 - 0.734 - - - - - SEC22 homolog A, vesicle trafficking protein [Source:ZFIN;Acc:ZDB-GENE-030131-3553]
40. casp7 ENSDARG00000091836 657 1.673 - 0.898 - - - 0.775 - - - caspase 7, apoptosis-related cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-050522-506]
41. h1fx ENSDARG00000054058 4075 1.67 - 0.751 - - - - - 0.919 - H1 histone family, member X [Source:ZFIN;Acc:ZDB-GENE-030131-1228]
42. cdh11 ENSDARG00000021442 1601 1.667 - 0.894 - - - 0.773 - - - cadherin 11, type 2, OB-cadherin (osteoblast) [Source:ZFIN;Acc:ZDB-GENE-980526-170]
43. coro7 ENSDARG00000089616 2141 1.664 - 0.958 - 0.706 - - - - - coronin 7 [Source:ZFIN;Acc:ZDB-GENE-050706-137]
44. fam89a ENSDARG00000079979 4375 1.662 - - - - - - 0.723 0.939 - family with sequence similarity 89, member A [Source:ZFIN;Acc:ZDB-GENE-111019-1]
45. pltp ENSDARG00000104495 1037 1.66 - 0.935 - - - 0.725 - - - phospholipid transfer protein [Source:ZFIN;Acc:ZDB-GENE-040801-22]
46. lpcat3 ENSDARG00000075178, ENSDARG00000109670 2713 1.645 - 0.878 - - - - 0.767 - - lysophosphatidylcholine acyltransferase 3 [Source:ZFIN;Acc:ZDB-GENE-041111-232]
47. elovl7a ENSDARG00000069279, ENSDARG00000114975 1963 1.637 - 0.852 - - - - 0.785 - - ELOVL fatty acid elongase 7a [Source:ZFIN;Acc:ZDB-GENE-030131-6149]
48. nedd8 ENSDARG00000007989 3896 1.634 - 0.876 - - - - 0.758 - - neural precursor cell expressed, developmentally down-regulated 8 [Source:ZFIN;Acc:ZDB-GENE-030616-588]
49. plcd1b ENSDARG00000034080 4074 1.632 - - - - - - 0.719 0.913 - phospholipase C, delta 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9435]
50. itgb1b.2 ENSDARG00000022689 523 1.632 - 0.882 - - - - 0.750 - - integrin, beta 1b.2 [Source:ZFIN;Acc:ZDB-GENE-040426-2598]
51. COL4A3BP COL4A3BP 3288 1.631 - 0.917 - - - - 0.714 - -
52. pak4 ENSDARG00000018110 1962 1.628 - 0.815 - 0.813 - - - - - p21 protein (Cdc42/Rac)-activated kinase 4 [Source:ZFIN;Acc:ZDB-GENE-040704-69]
53. ACTR3 ENSDARG00000091138 1739 1.623 - - - - - - 0.743 0.880 - ARP3 actin related protein 3 homolog [Source:ZFIN;Acc:ZDB-GENE-040428-2]
54. asmtl ENSDARG00000021433, ENSDARG00000114151 550 1.622 - 0.894 - - - 0.728 - - - acetylserotonin O-methyltransferase-like [Source:ZFIN;Acc:ZDB-GENE-030131-2854]
55. s100v1 ENSDARG00000070427 6633 1.619 - - - - - - 0.788 0.831 - S100 calcium binding protein V1 [Source:ZFIN;Acc:ZDB-GENE-080407-1]
56. tagln2 ENSDARG00000033466, ENSDARG00000110753 7636 1.613 - - - - - - 0.778 0.835 - transgelin 2 [Source:ZFIN;Acc:ZDB-GENE-020802-2]
57. idh1 ENSDARG00000025375, ENSDARG00000112650, ENSDARG00000117104 6100 1.603 - - - - - - 0.723 0.880 - isocitrate dehydrogenase 1 (NADP+), soluble [Source:ZFIN;Acc:ZDB-GENE-031006-1]
58. nrm ENSDARG00000063690 1371 1.598 - 0.786 - - - - 0.812 - - nurim [Source:ZFIN;Acc:ZDB-GENE-060503-445]
59. zfp36l2 ENSDARG00000021806, ENSDARG00000116819 2176 1.597 - 0.822 - - - - 0.775 - - zinc finger protein 36, C3H type-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5873]
60. pdia3 ENSDARG00000102640 7239 1.587 - - - 0.778 - 0.809 - - - protein disulfide isomerase family A, member 3 [Source:ZFIN;Acc:ZDB-GENE-031002-9]
61. tbca ENSDARG00000016754 6427 1.587 - - - - - 0.857 0.730 - - tubulin cofactor a [Source:ZFIN;Acc:ZDB-GENE-040426-962]
62. optn ENSDARG00000002663, ENSDARG00000111364 1440 1.583 - 0.808 - - - - 0.775 - - optineurin [Source:ZFIN;Acc:ZDB-GENE-030131-8103]
63. txn ENSDARG00000044125, ENSDARG00000116040 4758 1.583 - - - - - - 0.713 0.870 - thioredoxin [Source:ZFIN;Acc:ZDB-GENE-040718-162]
64. gorasp2 ENSDARG00000015126 3923 1.581 - 0.858 - - - - 0.723 - - golgi reassembly stacking protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1659]
65. ahr2 ENSDARG00000021833 762 1.575 - - - 0.831 - 0.744 - - - aryl hydrocarbon receptor 2 [Source:ZFIN;Acc:ZDB-GENE-990714-16]
66. irs1 ENSDARG00000054087 1809 1.574 - 0.870 - 0.704 - - - - - insulin receptor substrate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-872]
67. rac2 ENSDARG00000038010 5837 1.569 - 0.791 - - - - - 0.778 - Rac family small GTPase 2 [Source:ZFIN;Acc:ZDB-GENE-040625-27]
68. CABZ01062452.1 CABZ01062452.1 1721 1.568 - 0.804 - - - - 0.764 - -
69. tet3 ENSDARG00000062646 6672 1.567 - 0.857 - - - - 0.710 - - tet methylcytosine dioxygenase 3 [Source:ZFIN;Acc:ZDB-GENE-060526-109]
70. gpx7 ENSDARG00000091511 3045 1.566 - - - 0.703 - - - 0.863 - glutathione peroxidase 7 [Source:ZFIN;Acc:ZDB-GENE-050522-419]
71. ppp1r13l ENSDARG00000013777 2260 1.562 - 0.772 - - - - 0.790 - - protein phosphatase 1, regulatory subunit 13 like [Source:ZFIN;Acc:ZDB-GENE-050327-33]
72. pef1 ENSDARG00000023989 3013 1.562 - - - 0.795 - - 0.767 - - penta-EF-hand domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040801-259]
73. SVIL SVIL 2589 1.562 - - - - - 0.701 0.861 - -
74. sec24d ENSDARG00000045946 2395 1.562 - - - - - 0.727 0.835 - - SEC24 homolog D, COPII coat complex component [Source:ZFIN;Acc:ZDB-GENE-070117-2501]
75. slc39a9 ENSDARG00000070447 971 1.561 - 0.821 - 0.740 - - - - - solute carrier family 39, member 9 [Source:ZFIN;Acc:ZDB-GENE-060314-3]
76. arpc5b ENSDARG00000019062 2786 1.559 - - - - - 0.795 0.764 - - actin related protein 2/3 complex, subunit 5B [Source:ZFIN;Acc:ZDB-GENE-040120-7]
77. ZBTB16 ZBTB16 3385 1.556 - 0.800 - - - - 0.756 - -
78. phactr4a ENSDARG00000015552 1315 1.554 - - - 0.753 - 0.801 - - - phosphatase and actin regulator 4a [Source:ZFIN;Acc:ZDB-GENE-051030-69]
79. yipf2 ENSDARG00000021399 702 1.542 - - - 0.837 - 0.705 - - - Yip1 domain family, member 2 [Source:ZFIN;Acc:ZDB-GENE-040724-124]
80. aqp3a ENSDARG00000003808 9044 1.542 - - - 0.709 - - 0.833 - - aquaporin 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2826]
81. irf2bp2b ENSDARG00000098635 1961 1.541 - 0.783 - - - - 0.758 - - interferon regulatory factor 2 binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-040426-2574]
82. bnip3la ENSDARG00000025468 3097 1.541 - 0.787 - - - - 0.754 - - BCL2 interacting protein 3 like a [Source:ZFIN;Acc:ZDB-GENE-030131-2283]
83. myl9b ENSDARG00000008030 7830 1.533 - 0.724 - - - - - 0.809 - myosin, light chain 9b, regulatory [Source:ZFIN;Acc:ZDB-GENE-040426-2296]
84. nt5c2a ENSDARG00000039399 3062 1.533 - - - - - 0.759 0.774 - - 5'-nucleotidase, cytosolic IIa [Source:ZFIN;Acc:ZDB-GENE-030131-3566]
85. ddx56 ENSDARG00000020913 1070 1.53 - 0.778 - 0.752 - - - - - DEAD (Asp-Glu-Ala-Asp) box helicase 56 [Source:ZFIN;Acc:ZDB-GENE-040825-3]
86. gng5 ENSDARG00000039830 12102 1.527 - - - - - 0.784 0.743 - - guanine nucleotide binding protein (G protein), gamma 5 [Source:ZFIN;Acc:ZDB-GENE-030131-9966]
87. pgrmc1 ENSDARG00000054172 5423 1.527 - - - - - 0.812 0.715 - - progesterone receptor membrane component 1 [Source:ZFIN;Acc:ZDB-GENE-041114-91]
88. pxn_1 pxn_1 3991 1.523 - 0.739 - - - - 0.784 - -
89. map3k7 ENSDARG00000020469 2845 1.523 - 0.811 - - - - 0.712 - - mitogen-activated protein kinase kinase kinase 7 [Source:ZFIN;Acc:ZDB-GENE-041001-135]
90. frem2b ENSDARG00000102626 1416 1.521 - - - - - 0.755 0.766 - - Fras1 related extracellular matrix protein 2b [Source:ZFIN;Acc:ZDB-GENE-081119-4]
91. atp6v0ca ENSDARG00000057853 23277 1.521 - - - - - 0.746 0.775 - - ATPase H+ transporting V0 subunit ca [Source:ZFIN;Acc:ZDB-GENE-020419-23]
92. dda1 ENSDARG00000076074, ENSDARG00000109308 1993 1.521 - - - - - 0.787 0.734 - - DET1 and DDB1 associated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2137]
93. psph ENSDARG00000040314 1359 1.52 - 0.751 - - - - 0.769 - - phosphoserine phosphatase [Source:ZFIN;Acc:ZDB-GENE-050809-127]
94. PGAP3 ENSDARG00000057531, ENSDARG00000112574 2046 1.519 - - - 0.793 - - 0.726 - - post-GPI attachment to proteins 3 [Source:ZFIN;Acc:ZDB-GENE-080204-27]
95. hspa5 ENSDARG00000103846 4661 1.519 - 0.784 - - - 0.735 - - - heat shock protein 5 [Source:ZFIN;Acc:ZDB-GENE-031001-11]
96. ZFP36 ZFP36 1677 1.518 - 0.768 - - - - 0.750 - -
97. dcun1d1 ENSDARG00000099642 2043 1.517 - - - 0.774 - 0.743 - - - DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5443]
98. cnn2 ENSDARG00000035858 18201 1.516 - - - - - - 0.787 0.729 - calponin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-542]
99. zfand2a ENSDARG00000103511 829 1.515 - 0.812 - 0.703 - - - - - zinc finger, AN1-type domain 2A [Source:ZFIN;Acc:ZDB-GENE-040426-1596]
100. snai2 ENSDARG00000040046 2415 1.514 - 0.762 - - - - 0.752 - - snail family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030326-6]

There are 1500 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA