Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for pgam5

Gene Name Gene ID Reads Annotation
pgam5 ENSDARG00000035608 4044 PGAM family member 5, serine/threonine protein phosphatase, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-683]










Genes with expression patterns similar to pgam5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pgam5 ENSDARG00000035608 4044 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 PGAM family member 5, serine/threonine protein phosphatase, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-683]
2. CR387996.1 ENSDARG00000097774 3037 2.701 - 0.999 - - - - - 0.905 0.797
3. hdgfrp2 7462 2.547 0.780 - 0.940 - - 0.827 - - - hepatoma-derived growth factor-related protein 2, transcript variant X1
4. NAT16 ENSDARG00000086222 4682 2.542 0.825 0.995 - - - 0.722 - - - N-acetyltransferase 16 [Source:ZFIN;Acc:ZDB-GENE-030219-43]
5. nsa2 ENSDARG00000007708 6329 2.5 - 0.992 - - - - - 0.762 0.746 NSA2 ribosome biogenesis homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-488]
6. fam118b ENSDARG00000078983 1822 2.496 - - 0.998 - - - 0.710 - 0.788 family with sequence similarity 118, member B [Source:ZFIN;Acc:ZDB-GENE-060810-6]
7. GATAD2B ENSDARG00000005834 3855 2.489 - - - - 0.722 0.841 - 0.926 - GATA zinc finger domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-060503-655]
8. cnbpa ENSDARG00000045776 8648 2.421 0.706 0.944 - - - - - - 0.771 CCHC-type zinc finger, nucleic acid binding protein a [Source:ZFIN;Acc:ZDB-GENE-030131-5045]
9. znf319 znf319 3027 2.401 0.750 - - - - 0.724 - 0.927 -
10. dcbld2 ENSDARG00000062177, ENSDARG00000112201 3795 2.325 0.756 - - - - 0.795 - - 0.774 discoidin, CUB and LCCL domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1822]
11. ewsr1b ENSDARG00000020465, ENSDARG00000117011 10260 2.297 - 0.828 - - - 0.767 0.702 - - EWS RNA-binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-1600]
12. kntc1 ENSDARG00000101670 859 2.232 0.714 - - 0.753 - - 0.765 - - kinetochore associated 1 [Source:ZFIN;Acc:ZDB-GENE-050208-92]
13. nop16 ENSDARG00000044402 3645 2.195 0.723 - - 0.715 - - - - 0.757 NOP16 nucleolar protein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-267]
14. psma6b ENSDARG00000013966 4410 1.911 - - 0.995 - - - - 0.916 - proteasome subunit alpha 6b [Source:ZFIN;Acc:ZDB-GENE-040718-329]
15. arih2 ENSDARG00000012848 7087 1.9 - 0.994 - - - - - 0.906 - ariadne homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-2158]
16. ENSDARG00000087348 ENSDARG00000087348 2870 1.881 - - 0.996 - - - - 0.885 -
17. cops7a ENSDARG00000022788, ENSDARG00000112421 5302 1.852 - - 0.996 - - - - 0.856 - COP9 constitutive photomorphogenic homolog subunit 7A [Source:ZFIN;Acc:ZDB-GENE-030131-8680]
18. nme3 ENSDARG00000100990 3889 1.85 - 0.991 - - - - - 0.859 - NME/NM23 nucleoside diphosphate kinase 3 [Source:ZFIN;Acc:ZDB-GENE-000210-34]
19. celf1 ENSDARG00000005315 5598 1.84 - - 0.982 - - - - 0.858 - cugbp, Elav-like family member 1 [Source:ZFIN;Acc:ZDB-GENE-000501-1]
20. zgc:110339 ENSDARG00000046030 8180 1.839 - 0.898 0.941 - - - - - - zgc:110339 [Source:ZFIN;Acc:ZDB-GENE-050417-323]
21. brd8 ENSDARG00000025071 2605 1.795 - - 0.998 - - - - - 0.797 bromodomain containing 8 [Source:ZFIN;Acc:ZDB-GENE-030722-10]
22. btg2 ENSDARG00000020298 6616 1.792 - - 0.983 - - - - 0.809 - B-cell translocation gene 2 [Source:ZFIN;Acc:ZDB-GENE-000210-15]
23. nhp2l1b nhp2l1b 3898 1.786 0.791 0.995 - - - - - - -
24. gnb4b ENSDARG00000115383 7457 1.781 - - 0.990 - - - - - 0.791 guanine nucleotide binding protein (G protein), beta polypeptide 4b [Source:ZFIN;Acc:ZDB-GENE-041114-167]
25. zgc:65772 zgc:65772 2092 1.773 - - - - - - - 0.921 0.852
26. rae1 ENSDARG00000007196, ENSDARG00000113905 3321 1.773 - - 0.956 - - - - - 0.817 ribonucleic acid export 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1029]
27. tbp ENSDARG00000014994 1591 1.772 - - 0.998 - - - - - 0.774 TATA box binding protein [Source:ZFIN;Acc:ZDB-GENE-030616-563]
28. dhx15 ENSDARG00000015392 7496 1.769 - 0.991 - - - - - - 0.778 DEAH (Asp-Glu-Ala-His) box helicase 15 [Source:ZFIN;Acc:ZDB-GENE-030131-650]
29. skp2 ENSDARG00000004937, ENSDARG00000114929 1584 1.751 0.835 - - - - - - 0.916 - S-phase kinase-associated protein 2, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-030219-158]
30. MKI67 ENSDARG00000091150 11038 1.732 - 0.866 - - - - - 0.866 - marker of proliferation Ki-67 [Source:ZFIN;Acc:ZDB-GENE-030131-9771]
31. dnmt1 ENSDARG00000030756 2741 1.729 0.733 - 0.996 - - - - - - DNA (cytosine-5-)-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-990714-15]
32. atf4b2 atf4b2 4734 1.728 - - - - - - - 0.927 0.801
33. dnaja2 ENSDARG00000104066 11946 1.727 - - 0.944 - - - - - 0.783 DnaJ (Hsp40) homolog, subfamily A, member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2884]
34. upf3b ENSDARG00000000489, ENSDARG00000116719 2088 1.722 - 0.999 - 0.723 - - - - - UPF3B, regulator of nonsense mediated mRNA decay [Source:ZFIN;Acc:ZDB-GENE-040426-1630]
35. mrpl54 ENSDARG00000071468 2715 1.721 0.726 0.995 - - - - - - - mitochondrial ribosomal protein L54 [Source:ZFIN;Acc:ZDB-GENE-050208-381]
36. kmt2cb ENSDARG00000075560 4816 1.721 - - 0.987 - - - - - 0.734 lysine (K)-specific methyltransferase 2Cb [Source:ZFIN;Acc:ZDB-GENE-070705-340]
37. atrx ENSDARG00000042236, ENSDARG00000112921, ENSDARG00000116878 7922 1.72 - - - - - - 0.798 0.922 - alpha thalassemia/mental retardation syndrome X-linked homolog (human) [Source:ZFIN;Acc:ZDB-GENE-030912-11]
38. clasp2 ENSDARG00000020345 3382 1.718 - - - - - - - 0.912 0.806 cytoplasmic linker associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2343]
39. hp1bp3 ENSDARG00000044669 23708 1.713 - - - - - 0.860 - 0.853 - heterochromatin protein 1, binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-060810-79]
40. usp9 ENSDARG00000013708 9057 1.71 - 0.975 - - - - 0.735 - - ubiquitin specific peptidase 9 [Source:ZFIN;Acc:ZDB-GENE-061019-1]
41. stip1 ENSDARG00000004906 7742 1.709 0.719 - 0.990 - - - - - - stress-induced phosphoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-041121-17]
42. CABZ01034082.1 ENSDARG00000099583 2237 1.708 - - 0.998 - - - 0.710 - -
43. dr1 ENSDARG00000105098, ENSDARG00000113528 5263 1.704 - - - - - - 0.829 0.875 - down-regulator of transcription 1 [Source:ZFIN;Acc:ZDB-GENE-061013-797]
44. FUZ ENSDARG00000079730 821 1.702 - - 0.999 - - - - - 0.703 fuzzy planar cell polarity protein [Source:ZFIN;Acc:ZDB-GENE-090609-2]
45. igf2bp3 ENSDARG00000010266 5789 1.695 - 0.995 - - - - - - 0.700 insulin-like growth factor 2 mRNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-000308-1]
46. ewsr1a ENSDARG00000020258, ENSDARG00000113252 11221 1.688 - 0.979 - - - - 0.709 - - EWS RNA-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2317]
47. ppm1g ENSDARG00000075559 6516 1.681 - - - - - - - 0.893 0.788 protein phosphatase, Mg2+/Mn2+ dependent, 1G [Source:ZFIN;Acc:ZDB-GENE-030425-4]
48. Sep-06 Sep-06 5465 1.68 - - - - - - 0.770 0.910 -
49. gipc1 ENSDARG00000104483 2913 1.678 - - - - - 0.746 - 0.932 - GIPC PDZ domain containing family, member 1 [Source:ZFIN;Acc:ZDB-GENE-060726-1]
50. CDCA4 ENSDARG00000042319 7918 1.664 - - - - - 0.747 - 0.917 - cell division cycle associated 4 [Source:ZFIN;Acc:ZDB-GENE-030131-1695]
51. sox9b ENSDARG00000043923 5375 1.662 0.712 - 0.950 - - - - - - SRY (sex determining region Y)-box 9b [Source:ZFIN;Acc:ZDB-GENE-001103-2]
52. max ENSDARG00000024844 6035 1.66 - - - - - - 0.838 0.822 - myc associated factor X [Source:ZFIN;Acc:ZDB-GENE-990415-152]
53. hmgb3a ENSDARG00000056725 15668 1.659 - - - - - - 0.732 0.927 - high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
54. id2a ENSDARG00000055283 7428 1.659 - 0.947 - - - 0.712 - - - inhibitor of DNA binding 2a [Source:ZFIN;Acc:ZDB-GENE-020910-1]
55. aebp1 ENSDARG00000091726 906 1.657 - - - - - - - 0.890 0.767 AE binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2390]
56. nae1 ENSDARG00000011301, ENSDARG00000111542 1505 1.652 - - - - - 0.729 - 0.923 - nedd8 activating enzyme E1 subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1552]
57. rbm4.2 ENSDARG00000055080 5241 1.652 - - - - - - - 0.894 0.758 RNA binding motif protein 4.2 [Source:ZFIN;Acc:ZDB-GENE-030131-3019]
58. brd1a ENSDARG00000013596, ENSDARG00000116694 547 1.648 - - - - - - 0.720 0.928 - bromodomain containing 1a [Source:ZFIN;Acc:ZDB-GENE-041008-168]
59. pcif1 ENSDARG00000099084 2851 1.648 - - - - - 0.715 - 0.933 - PDX1 C-terminal inhibiting factor 1 [Source:ZFIN;Acc:ZDB-GENE-120920-2]
60. NELL2A ENSDARG00000090690 840 1.646 - - - 0.705 - - - 0.941 - neural EGFL like 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7972]
61. psmd8 ENSDARG00000020454 6645 1.645 - - - - - - 0.769 - 0.876 proteasome 26S subunit, non-ATPase 8 [Source:ZFIN;Acc:ZDB-GENE-040625-136]
62. ube2i ube2i 13024 1.644 - - - - - - 0.715 0.929 -
63. smad3a ENSDARG00000036096, ENSDARG00000117146 2668 1.634 - - - - - - - 0.896 0.738 SMAD family member 3a [Source:ZFIN;Acc:ZDB-GENE-000509-3]
64. setbp1 ENSDARG00000093799 4499 1.631 - - - - - 0.778 - 0.853 - SET binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060526-72]
65. psma2 ENSDARG00000040121 2504 1.627 - - - - - - 0.700 0.927 - proteasome subunit alpha 2 [Source:ZFIN;Acc:ZDB-GENE-050522-479]
66. rybpb ENSDARG00000053459 1464 1.626 - - - - - 0.824 - - 0.802 RING1 and YY1 binding protein b [Source:ZFIN;Acc:ZDB-GENE-061103-96]
67. blcap ENSDARG00000052073 8646 1.622 - - 0.834 - - 0.788 - - - bladder cancer associated protein [Source:ZFIN;Acc:ZDB-GENE-000330-7]
68. lmo3 ENSDARG00000008720, ENSDARG00000114518 4773 1.621 - - - - - 0.709 - 0.912 - LIM domain only 3 [Source:ZFIN;Acc:ZDB-GENE-050522-201]
69. hnrnpa0l_1 ENSDARG00000036161, ENSDARG00000076380, ENSDARG00000114889 553 1.621 - - - - - 0.704 - 0.917 - heterogeneous nuclear ribonucleoprotein A0, like [Source:ZFIN;Acc:ZDB-GENE-030131-618]
70. smc4 ENSDARG00000038882 4373 1.621 - - - - - - - 0.901 0.720 structural maintenance of chromosomes 4 [Source:ZFIN;Acc:ZDB-GENE-020419-21]
71. si:ch211-113a14.18 ENSDARG00000051735 1253 1.613 0.703 - - - - - - 0.910 - si:ch211-113a14.18 [Source:ZFIN;Acc:ZDB-GENE-121214-116]
72. mcm4 ENSDARG00000040041 7971 1.612 - - - - - 0.752 - - 0.860 minichromosome maintenance complex component 4 [Source:ZFIN;Acc:ZDB-GENE-030131-9544]
73. hat1 ENSDARG00000034916 5712 1.608 - - - - - - 0.762 - 0.846 histone acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040912-99]
74. myef2 ENSDARG00000059398 6050 1.594 - - - - - - 0.703 0.891 - myelin expression factor 2 [Source:ZFIN;Acc:ZDB-GENE-051120-114]
75. rps29 ENSDARG00000041232 71334 1.593 0.782 - 0.811 - - - - - - ribosomal protein S29 [Source:ZFIN;Acc:ZDB-GENE-040622-5]
76. isoc2 ENSDARG00000013371 1378 1.588 - - - - - - - 0.883 0.705 isochorismatase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070518-1]
77. mepce ENSDARG00000059461 703 1.583 - - - - - 0.717 - 0.866 - methylphosphate capping enzyme [Source:ZFIN;Acc:ZDB-GENE-030131-3936]
78. SMAD4 SMAD4 3233 1.582 - - - - - - - 0.789 0.793
79. smc1al ENSDARG00000058203 8838 1.582 - - - - - 0.849 - 0.733 - structural maintenance of chromosomes 1A, like [Source:ZFIN;Acc:ZDB-GENE-040426-57]
80. gna11b ENSDARG00000053326 5118 1.578 - - - - - - 0.739 0.839 - guanine nucleotide binding protein (G protein), alpha 11b (Gq class) [Source:ZFIN;Acc:ZDB-GENE-041121-9]
81. srsf3a ENSDARG00000025397, ENSDARG00000100815 11622 1.576 - - - - - 0.818 0.758 - - serine/arginine-rich splicing factor 3a [Source:ZFIN;Acc:ZDB-GENE-030616-631]
82. sumo3a ENSDARG00000028119 13447 1.573 - - - - - 0.824 0.749 - - small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
83. CHMP4B CHMP4B 1387 1.57 - - - - - - - 0.868 0.702
84. hoxa9a ENSDARG00000105013 1509 1.566 0.853 - - - - 0.713 - - - homeobox A9a [Source:ZFIN;Acc:ZDB-GENE-000823-1]
85. tuba8l3 ENSDARG00000070155 7525 1.565 0.735 - - - - 0.830 - - - tubulin, alpha 8 like 3 [Source:ZFIN;Acc:ZDB-GENE-040801-77]
86. ralbp1 ENSDARG00000078653 2440 1.564 - - - - - 0.723 - 0.841 - ralA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2098]
87. aurkb ENSDARG00000037640 4874 1.561 - - - - - 0.727 - - 0.834 aurora kinase B [Source:ZFIN;Acc:ZDB-GENE-020419-40]
88. SNRPG ENSDARG00000099667 18697 1.56 - - 0.821 - - 0.739 - - - small nuclear ribonucleoprotein polypeptide G [Source:ZFIN;Acc:ZDB-GENE-040912-105]
89. marcksl1b ENSDARG00000035715 37390 1.556 0.753 - - - - - - 0.803 - MARCKS-like 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2315]
90. wdr43 ENSDARG00000077264 1992 1.546 0.754 - - - - - - - 0.792 WD repeat domain 43 [Source:ZFIN;Acc:ZDB-GENE-021231-3]
91. cbsb ENSDARG00000010946 5779 1.543 - 0.828 - - - 0.715 - - - cystathionine-beta-synthase b [Source:ZFIN;Acc:ZDB-GENE-021030-3]
92. atrip ENSDARG00000063076 385 1.542 0.801 - - - - - - - 0.741 ATR interacting protein [Source:ZFIN;Acc:ZDB-GENE-050208-331]
93. trip13 ENSDARG00000025043 796 1.536 0.775 - - 0.761 - - - - - thyroid hormone receptor interactor 13 [Source:ZFIN;Acc:ZDB-GENE-040426-1488]
94. tcf3b ENSDARG00000099999, ENSDARG00000112646 3589 1.534 0.715 - - - - - - 0.819 - transcription factor 3b [Source:ZFIN;Acc:ZDB-GENE-051113-64]
95. Sep-02 Sep-02 10074 1.531 - - - - - 0.785 0.746 - -
96. rpl38 ENSDARG00000006413 59590 1.53 0.720 0.810 - - - - - - - ribosomal protein L38 [Source:ZFIN;Acc:ZDB-GENE-030131-8752]
97. sms ENSDARG00000008155 1192 1.529 0.761 - - - - 0.768 - - - spermine synthase [Source:ZFIN;Acc:ZDB-GENE-040625-150]
98. calm1b ENSDARG00000034187 13158 1.527 0.781 - - - - - - 0.746 - calmodulin 1b [Source:ZFIN;Acc:ZDB-GENE-030804-2]
99. ptenb ENSDARG00000056623 5783 1.527 - - - - - 0.780 0.747 - - phosphatase and tensin homolog B [Source:ZFIN;Acc:ZDB-GENE-030616-47]
100. bri3bp ENSDARG00000010108 6295 1.526 - - - - - 0.725 - 0.801 - bri3 binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-5254]

There are 1430 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA