Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for pfn1

Gene Name Gene ID Reads Annotation
pfn1 ENSDARG00000088091 71242 profilin 1 [Source:ZFIN;Acc:ZDB-GENE-031002-33]










Genes with expression patterns similar to pfn1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pfn1 ENSDARG00000088091 71242 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 profilin 1 [Source:ZFIN;Acc:ZDB-GENE-031002-33]
2. krt4 ENSDARG00000017624, ENSDARG00000115790 2008869 3.864 0.724 - - - 0.716 0.764 0.916 0.744 - keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. cfl1l ENSDARG00000012972 109130 3.861 0.739 - - - 0.775 - 0.711 0.842 0.794 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
4. s100a10b ENSDARG00000025254 25240 3.207 0.845 - - - - - 0.925 0.721 0.716 S100 calcium binding protein A10b [Source:ZFIN;Acc:ZDB-GENE-040426-1937]
5. anxa1a ENSDARG00000026726 23173 2.482 0.756 - - - - 0.795 0.931 - - annexin A1a [Source:ZFIN;Acc:ZDB-GENE-030131-6664]
6. tmsb4x ENSDARG00000077777 670040 2.385 0.831 - - - - - 0.803 - 0.751 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
7. si:ch211-157c3.4 ENSDARG00000087093 22736 2.371 0.723 - - - - - 0.863 - 0.785 si:ch211-157c3.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8454]
8. ppl ENSDARG00000101043 9196 2.356 0.742 - - - 0.706 - 0.908 - - periplakin [Source:ZFIN;Acc:ZDB-GENE-041008-196]
9. zgc:193505 ENSDARG00000093584, ENSDARG00000109499 47304 2.321 0.799 - - 0.747 0.775 - - - - zgc:193505 [Source:ZFIN;Acc:ZDB-GENE-030131-7103]
10. krt8 ENSDARG00000058358, ENSDARG00000109279 85624 2.297 - - - 0.860 - - - 0.705 0.732 keratin 8 [Source:ZFIN;Acc:ZDB-GENE-030411-5]
11. pdlim1 ENSDARG00000019845 5765 2.296 0.714 - - - - - 0.840 - 0.742 PDZ and LIM domain 1 (elfin) [Source:ZFIN;Acc:ZDB-GENE-030131-5227]
12. CABZ01074130.1 ENSDARG00000105274 26501 2.294 - - - - - - 0.800 0.773 0.721
13. actb1 ENSDARG00000037746, ENSDARG00000113649 273139 2.29 0.760 - - - 0.715 - - 0.815 - actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
14. prdx5 ENSDARG00000055064 27445 1.749 0.843 - - - - - 0.906 - - peroxiredoxin 5 [Source:ZFIN;Acc:ZDB-GENE-050522-159]
15. MAL 9331 1.707 - - - - - - 0.824 - 0.883 mal, T-cell differentiation protein
16. cldne ENSDARG00000043128 6960 1.695 - - - - - - 0.909 - 0.786 claudin e [Source:ZFIN;Acc:ZDB-GENE-010328-5]
17. gpd1b ENSDARG00000043180 6002 1.678 0.829 - - - - - 0.849 - - glycerol-3-phosphate dehydrogenase 1b [Source:ZFIN;Acc:ZDB-GENE-030131-3906]
18. cldni ENSDARG00000054616, ENSDARG00000111133 16328 1.669 - - - - - - 0.871 - 0.798 claudin i [Source:ZFIN;Acc:ZDB-GENE-010328-9]
19. dap ENSDARG00000000069, ENSDARG00000114419 13155 1.648 0.841 - - - - - 0.807 - - death-associated protein [Source:ZFIN;Acc:ZDB-GENE-000511-3]
20. gm2a ENSDARG00000088439 5387 1.64 0.780 - - - - - 0.860 - - GM2 ganglioside activator [Source:ZFIN;Acc:ZDB-GENE-050417-373]
21. bcap31 ENSDARG00000044972 8708 1.638 0.765 - - - - - 0.873 - - B cell receptor associated protein 31 [Source:ZFIN;Acc:ZDB-GENE-030616-63]
22. tagln2 ENSDARG00000033466, ENSDARG00000110753 7636 1.631 - - - - - - 0.907 - 0.724 transgelin 2 [Source:ZFIN;Acc:ZDB-GENE-020802-2]
23. capns1b ENSDARG00000013804 37726 1.629 0.885 - - - - - - 0.744 - calpain, small subunit 1 b [Source:ZFIN;Acc:ZDB-GENE-030131-5206]
24. mvp ENSDARG00000021242 6875 1.627 0.751 - - - - - 0.876 - - major vault protein [Source:ZFIN;Acc:ZDB-GENE-030826-33]
25. and1 ENSDARG00000088514 37603 1.627 - - - - - - 0.827 0.800 - actinodin1 [Source:ZFIN;Acc:ZDB-GENE-030131-9105]
26. FP067396.1 FP067396.1 32149 1.622 0.829 - - - 0.793 - - - -
27. epcam ENSDARG00000040534, ENSDARG00000110073 3322 1.619 0.801 - - - - - 0.818 - - epithelial cell adhesion molecule [Source:ZFIN;Acc:ZDB-GENE-040426-2209]
28. paics ENSDARG00000033539 30682 1.619 0.759 - - - - - 0.860 - - phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-9762]
29. zgc:56530 zgc:56530 6300 1.618 0.743 - - - - - 0.875 - -
30. and2 ENSDARG00000079302 20939 1.613 - - - - - - 0.873 0.740 - actinodin2 [Source:ZFIN;Acc:ZDB-GENE-041105-2]
31. msxb msxb 2650 1.605 - - - - - - 0.847 - 0.758
32. and3 ENSDARG00000056873 22650 1.604 - - - - - - 0.801 - 0.803 actinodin3 [Source:ZFIN;Acc:ZDB-GENE-040724-185]
33. capn2b ENSDARG00000055592 5431 1.603 - - - - - - 0.835 - 0.768 calpain 2, (m/II) large subunit b [Source:ZFIN;Acc:ZDB-GENE-050522-84]
34. fabp2 ENSDARG00000006427, ENSDARG00000110230 56349 1.598 0.780 - - - - - 0.818 - - fatty acid binding protein 2, intestinal [Source:ZFIN;Acc:ZDB-GENE-991019-5]
35. CU914813.1 CU914813.1 29656 1.592 0.784 - 0.808 - - - - - -
36. krt17 ENSDARG00000094041 7683 1.589 0.795 - - - - - 0.794 - - keratin 17 [Source:ZFIN;Acc:ZDB-GENE-060503-86]
37. capn2a ENSDARG00000091699 5924 1.584 0.713 - - - - - 0.871 - - calpain 2, (m/II) large subunit a [Source:ZFIN;Acc:ZDB-GENE-050320-69]
38. myh9a ENSDARG00000063295 27935 1.584 - - - - 0.714 - 0.870 - - myosin, heavy chain 9a, non-muscle [Source:ZFIN;Acc:ZDB-GENE-030131-5870]
39. atic ENSDARG00000016706 6032 1.584 0.721 - - - - - 0.863 - - 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase [Source:ZFIN;Acc:ZDB-GENE-011212-4]
40. anxa1c ENSDARG00000104359 23181 1.583 - - - - 0.783 - - - 0.800 annexin A1c [Source:ZFIN;Acc:ZDB-GENE-030131-5274]
41. ctsh ENSDARG00000041108 2873 1.583 0.746 - - - - - 0.837 - - cathepsin H [Source:ZFIN;Acc:ZDB-GENE-030131-3539]
42. im:7150988 ENSDARG00000109310 28520 1.581 - - - - - - - 0.771 0.810 im:7150988 [Source:ZFIN;Acc:ZDB-GENE-050309-169]
43. si:dkey-102c8.3 ENSDARG00000113572 4779 1.578 - - - - 0.761 - 0.817 - - si:dkey-102c8.3 [Source:ZFIN;Acc:ZDB-GENE-050208-328]
44. col1a1a ENSDARG00000012405, ENSDARG00000116113 178153 1.577 - - - - - - - 0.814 0.763 collagen, type I, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9102]
45. cyp2y3 ENSDARG00000068493, ENSDARG00000101423 3119 1.576 0.772 - - - - - 0.804 - - cytochrome P450, family 2, subfamily Y, polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-050522-490]
46. ambp ENSDARG00000004296, ENSDARG00000112731 1305 1.574 0.747 - - - - - 0.827 - - alpha-1-microglobulin/bikunin precursor [Source:ZFIN;Acc:ZDB-GENE-040426-1608]
47. TMEM179 ENSDARG00000013292 3452 1.572 0.701 - - - - - 0.871 - - transmembrane protein 179 [Source:ZFIN;Acc:ZDB-GENE-040808-25]
48. zgc:109868 zgc:109868 7474 1.566 0.787 - - - - - 0.779 - -
49. KRT78 KRT78 10751 1.565 0.713 - - - - - 0.852 - -
50. cldnb ENSDARG00000009544 6036 1.56 - - - - 0.714 - 0.846 - - claudin b [Source:ZFIN;Acc:ZDB-GENE-010328-2]
51. bri3 ENSDARG00000086332 8405 1.556 0.801 - - - - - 0.755 - - brain protein I3 [Source:ZFIN;Acc:ZDB-GENE-030131-3038]
52. COL28A1_1 COL28A1_1 11434 1.556 - - - - 0.745 - 0.811 - -
53. sec23b ENSDARG00000019360 6210 1.554 0.783 - - - - - 0.771 - - Sec23 homolog B, COPII coat complex component [Source:ZFIN;Acc:ZDB-GENE-030131-5479]
54. CABZ01045212.1 ENSDARG00000087525 1460 1.543 0.782 - - - - - 0.761 - - major facilitator superfamily domain-containing protein 8-like [Source:NCBI gene;Acc:564731]
55. cdc42l ENSDARG00000040158, ENSDARG00000116748 11671 1.543 - - - - - - 0.839 - 0.704 cell division cycle 42, like [Source:ZFIN;Acc:ZDB-GENE-030131-6069]
56. rhoae rhoae 4047 1.542 0.729 - - - - - 0.813 - -
57. smox ENSDARG00000036967 3816 1.542 0.702 - - - - - 0.840 - - spermine oxidase [Source:ZFIN;Acc:ZDB-GENE-031201-3]
58. rer1 ENSDARG00000012747 6939 1.54 0.725 - - - - - 0.815 - - retention in endoplasmic reticulum sorting receptor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1494]
59. zgc:92061 zgc:92061 21304 1.538 - - - - - - 0.797 - 0.741
60. MPC2 ENSDARG00000024478 4194 1.533 0.780 - - - - - 0.753 - - mitochondrial pyruvate carrier 2 [Source:ZFIN;Acc:ZDB-GENE-030131-330]
61. zgc:161979_1 zgc:161979_1 206500 1.525 0.724 - - - - - 0.801 - -
62. APOA4_1 APOA4_1 3645 1.52 0.745 - - - - - 0.775 - -
63. coro1ca ENSDARG00000035598 9278 1.516 0.741 - - - - - 0.775 - - coronin, actin binding protein, 1Ca [Source:ZFIN;Acc:ZDB-GENE-030114-6]
64. cry3_1 cry3_1 3347 1.497 0.730 - - - - - 0.767 - -
65. jupa ENSDARG00000070787, ENSDARG00000112777 20968 1.496 - - - - 0.714 - 0.782 - - junction plakoglobin a [Source:ZFIN;Acc:ZDB-GENE-991207-22]
66. mt2 ENSDARG00000041623, ENSDARG00000113583 15333 1.496 0.720 - - - - - 0.776 - - metallothionein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4174]
67. sparc ENSDARG00000019353 38281 1.477 - - - - - - - 0.719 0.758 secreted protein, acidic, cysteine-rich (osteonectin) [Source:ZFIN;Acc:ZDB-GENE-030131-9]
68. glula ENSDARG00000099776 14156 1.475 0.711 - - - - - 0.764 - - glutamate-ammonia ligase (glutamine synthase) a [Source:ZFIN;Acc:ZDB-GENE-030131-688]
69. hoga1 ENSDARG00000018944 800 1.466 0.730 - - - - - 0.736 - - 4-hydroxy-2-oxoglutarate aldolase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2242]
70. dgkaa ENSDARG00000060626, ENSDARG00000110977 2315 1.466 0.719 - - - - - 0.747 - - diacylglycerol kinase, alpha a [Source:ZFIN;Acc:ZDB-GENE-060616-305]
71. acsl4a ENSDARG00000004078 4241 1.458 0.718 - - - - - 0.740 - - acyl-CoA synthetase long chain family member 4a [Source:ZFIN;Acc:ZDB-GENE-040426-1565]
72. arf1l arf1l 9119 1.445 0.719 - - - - - 0.726 - -
73. TMEM254 ENSDARG00000109902 3377 1.438 0.709 - - - - - 0.729 - - transmembrane protein 254 [Source:ZFIN;Acc:ZDB-GENE-040426-1348]
74. zgc:85975 4738 1.415 0.710 - - - 0.705 - - - - zgc:85975
75. dmgdh ENSDARG00000025703 6088 1.415 0.714 - - - - - 0.701 - - dimethylglycine dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-080227-8]
76. dlx3b ENSDARG00000014626 3647 1.415 - - - - - - 0.703 - 0.712 distal-less homeobox 3b [Source:ZFIN;Acc:ZDB-GENE-980526-280]
77. BX957362.1 ENSDARG00000105682 1941 1.412 0.709 - - - - - 0.703 - - uncharacterized LOC103911422 [Source:NCBI gene;Acc:103911422]
78. SLC13A4 ENSDARG00000059053 2114 1.408 0.707 - - - - - 0.701 - - solute carrier family 13 (sodium/sulfate symporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-070424-71]
79. apoc1l apoc1l 398664 1.407 0.704 - - - - - 0.703 - -
80. ssr2 ENSDARG00000005230 31940 0.953 - - - - - - 0.953 - - signal sequence receptor, beta [Source:ZFIN;Acc:ZDB-GENE-010413-1]
81. col18a1 col18a1 20555 0.916 - - - - - - 0.916 - -
82. ensab ENSDARG00000061644 2436 0.906 - - - - - - 0.906 - - endosulfine alpha b [Source:ZFIN;Acc:ZDB-GENE-060526-294]
83. gsnb ENSDARG00000045262 4382 0.905 - - - - - - 0.905 - - gelsolin b [Source:ZFIN;Acc:ZDB-GENE-030131-8567]
84. zgc:136410 ENSDARG00000102241 8433 0.903 - - - - - - 0.903 - - zgc:136410 [Source:ZFIN;Acc:ZDB-GENE-060421-6071]
85. PARD3B_1 PARD3B_1 1735 0.902 - - - - - - 0.902 - -
86. igfbp2a ENSDARG00000052470, ENSDARG00000111105 1939 0.898 - - - - - - 0.898 - - insulin-like growth factor binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-000125-12]
87. itgb1b.1 ENSDARG00000053232 4721 0.897 - - - - - - 0.897 - - integrin, beta 1b.1 [Source:ZFIN;Acc:ZDB-GENE-060803-3]
88. zgc:161979 zgc:161979 196746 0.896 - - - - - - 0.896 - -
89. CU915738.1 CU915738.1 3723 0.89 - - - - - - 0.890 - -
90. c3a c3a 6690 0.89 - - - - - - 0.890 - -
91. degs2 ENSDARG00000042544 1912 0.89 - - - - - - 0.890 - - delta(4)-desaturase, sphingolipid 2 [Source:ZFIN;Acc:ZDB-GENE-080228-1]
92. CABZ01007794.1 CABZ01007794.1 14290 0.889 - - - - - - 0.889 - -
93. aqp3a ENSDARG00000003808 9044 0.888 - - - - - - 0.888 - - aquaporin 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2826]
94. cnn2 ENSDARG00000035858 18201 0.887 - - - - - - 0.887 - - calponin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-542]
95. cav1 ENSDARG00000103747 15519 0.884 - - - - - - 0.884 - - caveolin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2415]
96. fn1b ENSDARG00000006526 9542 0.881 - - - - - - 0.881 - - fibronectin 1b [Source:ZFIN;Acc:ZDB-GENE-030131-6545]
97. ppp1r13l ENSDARG00000013777 2260 0.88 - - - - - - 0.880 - - protein phosphatase 1, regulatory subunit 13 like [Source:ZFIN;Acc:ZDB-GENE-050327-33]
98. SERP1_1 ENSDARG00000076223 6668 0.878 - - - - - - 0.878 - - stress associated endoplasmic reticulum protein 1 [Source:HGNC Symbol;Acc:HGNC:10759]
99. krt5 ENSDARG00000058371, ENSDARG00000112017 32812 0.878 - - - - - - 0.878 - - keratin 5 [Source:ZFIN;Acc:ZDB-GENE-991110-23]
100. pck2 ENSDARG00000020956, ENSDARG00000110463 4713 0.875 - - - - - - 0.875 - - phosphoenolpyruvate carboxykinase 2 (mitochondrial) [Source:ZFIN;Acc:ZDB-GENE-040426-2266]

There are 575 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA