Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for pfdn4

Gene Name Gene ID Reads Annotation
pfdn4 ENSDARG00000061228 8266 prefoldin subunit 4 [Source:ZFIN;Acc:ZDB-GENE-100922-122]










Genes with expression patterns similar to pfdn4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pfdn4 ENSDARG00000061228 8266 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 prefoldin subunit 4 [Source:ZFIN;Acc:ZDB-GENE-100922-122]
2. map1lc3b ENSDARG00000101127 3958 2.565 0.910 0.895 - - - - 0.760 - - microtubule-associated protein 1 light chain 3 beta [Source:ZFIN;Acc:ZDB-GENE-030131-1145]
3. eya3 ENSDARG00000036100 1965 2.429 - 0.912 0.797 - - - 0.720 - - EYA transcriptional coactivator and phosphatase 3 [Source:ZFIN;Acc:ZDB-GENE-060503-864]
4. rnf10 ENSDARG00000079687 6768 2.418 - 0.848 0.782 - - - 0.788 - - ring finger protein 10 [Source:ZFIN;Acc:ZDB-GENE-030131-2969]
5. ndufs1 ENSDARG00000028546 5795 2.407 - 0.937 - - - 0.714 0.756 - - NADH:ubiquinone oxidoreductase core subunit S1 [Source:ZFIN;Acc:ZDB-GENE-030131-478]
6. si:ch211-121a2.2 ENSDARG00000039682 1240 2.404 - 0.919 - - - 0.764 0.721 - - si:ch211-121a2.2 [Source:ZFIN;Acc:ZDB-GENE-070705-21]
7. ddx39ab ENSDARG00000015111 11619 2.327 - - 0.785 0.737 - - 0.805 - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Ab [Source:ZFIN;Acc:ZDB-GENE-040426-2902]
8. ifrd2 ENSDARG00000036811, ENSDARG00000115385 3697 2.31 - - - - 0.807 0.774 0.729 - - interferon-related developmental regulator 2 [Source:ZFIN;Acc:ZDB-GENE-040801-140]
9. atp5d 20825 2.304 0.712 - - - 0.809 0.783 - - - ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit
10. atf4b1 atf4b1 17316 2.285 0.739 - 0.772 - - 0.774 - - -
11. phb ENSDARG00000057414 9551 2.268 - - 0.767 - 0.734 - 0.767 - - prohibitin [Source:ZFIN;Acc:ZDB-GENE-030131-6577]
12. mier1b ENSDARG00000001447 1680 1.887 0.905 - - - - - - - 0.982 mesoderm induction early response 1b, transcriptional regulator [Source:ZFIN;Acc:ZDB-GENE-070705-170]
13. atp5mf ENSDARG00000037867 11052 1.872 0.892 - - - - - - - 0.980 ATP synthase membrane subunit f [Source:ZFIN;Acc:ZDB-GENE-050309-87]
14. aamp ENSDARG00000045019 2818 1.853 0.929 0.924 - - - - - - - angio-associated, migratory cell protein [Source:ZFIN;Acc:ZDB-GENE-040426-2370]
15. yap1 ENSDARG00000068401, ENSDARG00000112952 16365 1.846 - 0.891 - - - - - - 0.955 Yes-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9710]
16. naa15a ENSDARG00000003213 5889 1.832 - - - - - - 0.847 - 0.985 N(alpha)-acetyltransferase 15, NatA auxiliary subunit a [Source:ZFIN;Acc:ZDB-GENE-030131-2392]
17. ubqln4 ENSDARG00000052975 6453 1.83 0.843 - - - - - - - 0.987 ubiquilin 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6269]
18. snx12 ENSDARG00000019060 9563 1.796 - - 0.810 - - - - - 0.986 sorting nexin 12 [Source:ZFIN;Acc:ZDB-GENE-040426-787]
19. cnih4 ENSDARG00000087759 3937 1.793 0.821 - - - - - - - 0.972 cornichon family AMPA receptor auxiliary protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-868]
20. acbd6 ENSDARG00000039456 2355 1.792 - - - - 0.805 - - - 0.987 acyl-CoA binding domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-030131-2810]
21. prdx3 ENSDARG00000032102, ENSDARG00000114240 10034 1.79 - 0.895 - - - - 0.895 - - peroxiredoxin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-18]
22. tars ENSDARG00000013250, ENSDARG00000110996, ENSDARG00000113759 4599 1.784 0.949 - 0.835 - - - - - - threonyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-041010-218]
23. pfkfb3 ENSDARG00000001953 656 1.78 0.896 0.884 - - - - - - - 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2724]
24. atpif1a 6030 1.78 - 0.945 - - - - 0.835 - - ATPase inhibitory factor 1a
25. rgs12b ENSDARG00000036774 5088 1.763 0.877 0.886 - - - - - - - regulator of G protein signaling 12b [Source:ZFIN;Acc:ZDB-GENE-031006-13]
26. rtf1 ENSDARG00000008947 6596 1.757 - 0.924 0.833 - - - - - - RTF1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-030131-6778]
27. C1QBP ENSDARG00000039887 11186 1.755 - - - - - - 0.771 - 0.984 complement component 1, q subcomponent binding protein [Source:ZFIN;Acc:ZDB-GENE-050417-408]
28. psmb1 ENSDARG00000009640 8628 1.742 0.945 - 0.797 - - - - - - proteasome subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-040618-2]
29. sdhb ENSDARG00000075768 5493 1.742 - 0.925 - - - - 0.817 - - succinate dehydrogenase complex, subunit B, iron sulfur (Ip) [Source:ZFIN;Acc:ZDB-GENE-030131-8005]
30. mrpl36 ENSDARG00000070607 4069 1.74 - 0.964 - - - - 0.776 - - mitochondrial ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-060503-821]
31. zgc:195001 ENSDARG00000070484 3281 1.736 - - 0.756 - - - - - 0.980 zgc:195001 [Source:ZFIN;Acc:ZDB-GENE-081022-173]
32. nid1a ENSDARG00000068710 3948 1.734 - - - - - - 0.754 - 0.980 nidogen 1a [Source:ZFIN;Acc:ZDB-GENE-050302-58]
33. tmeff1b ENSDARG00000056740 11253 1.731 - - - - - - - 0.774 0.957 transmembrane protein with EGF-like and two follistatin-like domains 1b [Source:ZFIN;Acc:ZDB-GENE-050706-143]
34. pikfyve ENSDARG00000056112 1583 1.727 0.849 0.878 - - - - - - - phosphoinositide kinase, FYVE finger containing [Source:ZFIN;Acc:ZDB-GENE-030131-9636]
35. atp5o 10343 1.723 0.887 - - - - - 0.836 - - ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit
36. csrnp2 ENSDARG00000075972 1650 1.721 - 0.889 - - - - - 0.832 - cysteine-serine-rich nuclear protein 2 [Source:ZFIN;Acc:ZDB-GENE-090312-137]
37. hnrnpk ENSDARG00000018914 8841 1.72 - 0.878 0.842 - - - - - - heterogeneous nuclear ribonucleoprotein K [Source:ZFIN;Acc:ZDB-GENE-040426-1926]
38. rnf7 ENSDARG00000055524 3390 1.715 - 0.914 - - - - 0.801 - - ring finger protein 7 [Source:ZFIN;Acc:ZDB-GENE-050220-12]
39. syne2b ENSDARG00000053484 9225 1.715 - - - - - - 0.755 - 0.960 spectrin repeat containing, nuclear envelope 2b [Source:ZFIN;Acc:ZDB-GENE-071218-5]
40. fermt2 ENSDARG00000020242 9351 1.715 - 0.945 - - - - 0.770 - - fermitin family member 2 [Source:ZFIN;Acc:ZDB-GENE-050506-132]
41. ttc27 ENSDARG00000007918 1228 1.71 0.901 - - - 0.809 - - - - tetratricopeptide repeat domain 27 [Source:ZFIN;Acc:ZDB-GENE-030102-1]
42. aurkaip1 ENSDARG00000074985 2214 1.709 0.936 - - - - - 0.773 - - aurora kinase A interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-070928-24]
43. snrpc ENSDARG00000009871 9567 1.708 - 0.940 - - - - 0.768 - - small nuclear ribonucleoprotein polypeptide C [Source:ZFIN;Acc:ZDB-GENE-020419-26]
44. ctsf ENSDARG00000063095 4564 1.7 0.901 - 0.799 - - - - - - cathepsin F [Source:ZFIN;Acc:ZDB-GENE-030131-9831]
45. zgc:158296 ENSDARG00000070923 3935 1.7 0.951 - - - - - 0.749 - - zgc:158296 [Source:ZFIN;Acc:ZDB-GENE-070112-1272]
46. rap2c ENSDARG00000015649 4709 1.699 - 0.912 - - - - 0.787 - - RAP2C, member of RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-041024-1]
47. ptbp3 ENSDARG00000043757 6760 1.695 0.791 0.904 - - - - - - - polypyrimidine tract binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-091116-1]
48. adss ENSDARG00000002071 5497 1.692 - 0.955 - - - - 0.737 - - adenylosuccinate synthase [Source:ZFIN;Acc:ZDB-GENE-050417-337]
49. cttnbp2 ENSDARG00000040991 1697 1.687 - 0.918 - - - - 0.769 - - cortactin binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8134]
50. gyg1a ENSDARG00000011934 2276 1.687 - 0.930 - - - - 0.757 - - glycogenin 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2910]
51. SNORD72 SNORD72 4018 1.685 0.939 - - - - - - 0.746 -
52. cdk11b ENSDARG00000102546 1579 1.683 - 0.892 0.791 - - - - - - cyclin-dependent kinase 11B [Source:ZFIN;Acc:ZDB-GENE-041212-74]
53. meis4.1a meis4.1a 1165 1.676 - 0.907 - - - - 0.769 - -
54. cnbpb ENSDARG00000070922 14606 1.676 - - - - - 0.871 0.805 - - CCHC-type zinc finger, nucleic acid binding protein b [Source:ZFIN;Acc:ZDB-GENE-030131-7782]
55. PSIP1 PSIP1 5252 1.676 - 0.918 - - - - 0.758 - -
56. hnrpl 6412 1.673 0.925 - - - - - 0.748 - - heterogeneous nuclear ribonucleoprotein L, transcript variant X1
57. zgc:66479 ENSDARG00000008732 3347 1.673 0.953 - - - - - 0.720 - - zgc:66479 [Source:ZFIN;Acc:ZDB-GENE-031030-10]
58. ndufs5 ENSDARG00000006290 15918 1.671 - - 0.882 - - - - - 0.789 NADH:ubiquinone oxidoreductase subunit S5 [Source:ZFIN;Acc:ZDB-GENE-050522-437]
59. si:ch211-156j16.1 ENSDARG00000092035 7441 1.668 - 0.942 - - - - 0.726 - - si:ch211-156j16.1 [Source:ZFIN;Acc:ZDB-GENE-030131-4106]
60. rps9 ENSDARG00000011405, ENSDARG00000113248 100731 1.663 0.751 - - - - - - - 0.912 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
61. eaf2 ENSDARG00000010432 3768 1.662 - - 0.815 - - - 0.847 - - ELL associated factor 2 [Source:ZFIN;Acc:ZDB-GENE-040625-179]
62. farsa ENSDARG00000098825 2813 1.661 0.913 - - - - - 0.748 - - phenylalanyl-tRNA synthetase subunit alpha [Source:ZFIN;Acc:ZDB-GENE-050512-2]
63. lsm4 ENSDARG00000023852 6083 1.659 0.924 - - - 0.735 - - - - LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-040426-1652]
64. cox6b2 ENSDARG00000037860 33134 1.659 - - - - - 0.842 0.817 - - cytochrome c oxidase subunit 6B2 [Source:ZFIN;Acc:ZDB-GENE-040426-1566]
65. erlin1 ENSDARG00000021991 5664 1.657 - 0.904 - - - - 0.753 - - ER lipid raft associated 1 [Source:ZFIN;Acc:ZDB-GENE-050327-13]
66. cox14 ENSDARG00000092124 2229 1.654 0.915 - - - - - 0.739 - - cytochrome c oxidase assembly factor COX14 [Source:ZFIN;Acc:ZDB-GENE-060503-626]
67. ttk ENSDARG00000041361 3911 1.654 - - 0.860 - 0.794 - - - - ttk protein kinase [Source:ZFIN;Acc:ZDB-GENE-030123-1]
68. vat1 ENSDARG00000056481, ENSDARG00000111382 7389 1.652 0.904 - - - - - 0.748 - - vesicle amine transport 1 [Source:ZFIN;Acc:ZDB-GENE-030616-178]
69. metap2b_1 ENSDARG00000102571 5507 1.651 - - - - - 0.810 0.841 - - methionyl aminopeptidase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-2172]
70. pygmb ENSDARG00000013317 5454 1.651 0.924 - - - - - 0.727 - - phosphorylase, glycogen, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-1206]
71. nr2f1a ENSDARG00000052695 5037 1.65 - 0.915 0.735 - - - - - - nuclear receptor subfamily 2, group F, member 1a [Source:ZFIN;Acc:ZDB-GENE-980526-115]
72. eif4h ENSDARG00000042252 6742 1.649 - - 0.857 - - - 0.792 - - eukaryotic translation initiation factor 4h [Source:ZFIN;Acc:ZDB-GENE-010328-19]
73. pik3r1 ENSDARG00000038524 3615 1.646 - 0.877 - - - - - - 0.769 phosphoinositide-3-kinase, regulatory subunit 1 (alpha) [Source:ZFIN;Acc:ZDB-GENE-030131-1280]
74. klf11a ENSDARG00000030844 3972 1.644 - 0.846 - - 0.798 - - - - Kruppel-like factor 11a [Source:ZFIN;Acc:ZDB-GENE-030131-3568]
75. mrpl19 ENSDARG00000011885 2208 1.644 0.925 - - - - - 0.719 - - mitochondrial ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040801-55]
76. dcaf7 ENSDARG00000054355 3517 1.641 0.925 - - - - - 0.716 - - ddb1 and cul4 associated factor 7 [Source:ZFIN;Acc:ZDB-GENE-030131-9511]
77. flot2a ENSDARG00000004830 5276 1.641 - 0.904 - - - - 0.737 - - flotillin 2a [Source:ZFIN;Acc:ZDB-GENE-020430-3]
78. xpo1b ENSDARG00000063229 2529 1.639 - - 0.809 - - - - 0.830 - exportin 1 (CRM1 homolog, yeast) b [Source:ZFIN;Acc:ZDB-GENE-070530-6]
79. mybphb ENSDARG00000003081 5208 1.639 0.933 - - - - - 0.706 - - myosin binding protein Hb [Source:ZFIN;Acc:ZDB-GENE-030131-9794]
80. fxr1 ENSDARG00000022968 2831 1.638 - 0.935 - - - - 0.703 - - fragile X mental retardation, autosomal homolog 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5431]
81. cav3 ENSDARG00000024141 14906 1.638 0.708 - - - - - - - 0.930 caveolin 3 [Source:ZFIN;Acc:ZDB-GENE-050522-426]
82. TNRC6A ENSDARG00000079688 14433 1.635 - - - - - - 0.782 - 0.853 trinucleotide repeat containing 6a [Source:ZFIN;Acc:ZDB-GENE-030131-2519]
83. cnbpa ENSDARG00000045776 8648 1.635 - - 0.719 - 0.916 - - - - CCHC-type zinc finger, nucleic acid binding protein a [Source:ZFIN;Acc:ZDB-GENE-030131-5045]
84. col1a2 ENSDARG00000020007 36228 1.634 - 0.919 0.715 - - - - - - collagen, type I, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8415]
85. smx5 ENSDARG00000070867, ENSDARG00000111500, ENSDARG00000113078, ENSDARG00000113975 3132 1.632 0.932 - - - - - - 0.700 - smx5 [Source:ZFIN;Acc:ZDB-GENE-000616-10]
86. sdha ENSDARG00000016721 8255 1.631 - - - - 0.775 - 0.856 - - succinate dehydrogenase complex, subunit A, flavoprotein (Fp) [Source:ZFIN;Acc:ZDB-GENE-040426-874]
87. usp4 ENSDARG00000014770 1684 1.628 0.909 - - - - - 0.719 - - ubiquitin specific peptidase 4 (proto-oncogene) [Source:ZFIN;Acc:ZDB-GENE-041008-187]
88. ppp1r3ca ENSDARG00000071005, ENSDARG00000111817, ENSDARG00000112962 2641 1.628 0.920 - - - - - 0.708 - - protein phosphatase 1, regulatory subunit 3Ca [Source:ZFIN;Acc:ZDB-GENE-040718-70]
89. USMG5 USMG5 10356 1.627 - - 0.761 - - - 0.866 - -
90. vps4a ENSDARG00000030114 933 1.626 0.908 - - - - - 0.718 - - vacuolar protein sorting 4a homolog A (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060929-388]
91. nol11 ENSDARG00000026767 2528 1.626 - 0.915 - - - - 0.711 - - nucleolar protein 11 [Source:ZFIN;Acc:ZDB-GENE-030131-419]
92. eno1a ENSDARG00000022456, ENSDARG00000116458 14401 1.624 - 0.911 - - - - 0.713 - - enolase 1a, (alpha) [Source:ZFIN;Acc:ZDB-GENE-030131-6048]
93. spata13 ENSDARG00000062837 5330 1.622 0.873 - - - 0.749 - - - - spermatogenesis associated 13 [Source:ZFIN;Acc:ZDB-GENE-091116-25]
94. kpnb3 ENSDARG00000040245 7967 1.621 - - - - 0.822 - 0.799 - - karyopherin (importin) beta 3 [Source:ZFIN;Acc:ZDB-GENE-030424-2]
95. u2surp ENSDARG00000061490 2814 1.619 - 0.903 - - - - 0.716 - - U2 snRNP-associated SURP domain containing [Source:ZFIN;Acc:ZDB-GENE-070912-400]
96. ewsr1a ENSDARG00000020258, ENSDARG00000113252 11221 1.617 0.914 - 0.703 - - - - - - EWS RNA-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2317]
97. zgc:55733 ENSDARG00000103845 1550 1.615 0.902 - - - - - 0.713 - - zgc:55733 [Source:ZFIN;Acc:ZDB-GENE-040426-791]
98. camlg ENSDARG00000100409 2157 1.615 0.913 - - - - - 0.702 - - calcium modulating ligand [Source:ZFIN;Acc:ZDB-GENE-040426-2407]
99. pelo ENSDARG00000055477 1927 1.612 0.860 - - - - - 0.752 - - pelota mRNA surveillance and ribosome rescue factor [Source:ZFIN;Acc:ZDB-GENE-040426-1074]
100. drg1 ENSDARG00000039345 7545 1.609 - - 0.836 - - - 0.773 - - developmentally regulated GTP binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8767]

There are 1542 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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