Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for pfdn2

Gene Name Gene ID Reads Annotation
pfdn2 ENSDARG00000025391, ENSDARG00000110096 3176 prefoldin subunit 2 [Source:ZFIN;Acc:ZDB-GENE-060519-27]










Genes with expression patterns similar to pfdn2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pfdn2 ENSDARG00000025391, ENSDARG00000110096 3176 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 prefoldin subunit 2 [Source:ZFIN;Acc:ZDB-GENE-060519-27]
2. smyd1b ENSDARG00000091253 4964 3.302 0.781 0.764 - - - 0.800 0.957 - - SET and MYND domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-060522-1]
3. AIMP1 ENSDARG00000060036 4136 3.282 0.719 0.778 - - - 0.838 0.947 - - aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 [Source:ZFIN;Acc:ZDB-GENE-060825-144]
4. hfe2 4113 3.164 0.763 0.709 - - - 0.724 0.968 - - hemochromatosis type 2
5. ptp4a3 ENSDARG00000039997 1964 2.546 0.719 0.853 - - - - 0.974 - - protein tyrosine phosphatase type IVA, member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2220]
6. ndufv1 ENSDARG00000036438 8437 2.502 0.771 - - - - 0.871 - - 0.860 NADH:ubiquinone oxidoreductase core subunit V1 [Source:ZFIN;Acc:ZDB-GENE-040808-73]
7. dag1 ENSDARG00000016153 10886 2.499 0.700 - - - - - 0.969 - 0.830 dystroglycan 1 [Source:ZFIN;Acc:ZDB-GENE-021223-1]
8. eya1 ENSDARG00000014259, ENSDARG00000116267 5111 2.497 0.771 0.887 - - - 0.839 - - - EYA transcriptional coactivator and phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-990712-18]
9. hdgfrp2 7462 2.497 0.773 0.759 - - - - 0.965 - - hepatoma-derived growth factor-related protein 2, transcript variant X1
10. calm1b ENSDARG00000034187 13158 2.446 0.818 - - - - 0.832 - - 0.796 calmodulin 1b [Source:ZFIN;Acc:ZDB-GENE-030804-2]
11. ATP5J_2 ATP5J_2 2381 2.441 0.794 0.804 - - - 0.843 - - -
12. txlnbb ENSDARG00000076241 6396 2.44 0.794 0.825 - - - 0.821 - - - taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
13. cnbpa ENSDARG00000045776 8648 2.438 0.717 - - - - 0.761 0.960 - - CCHC-type zinc finger, nucleic acid binding protein a [Source:ZFIN;Acc:ZDB-GENE-030131-5045]
14. rassf8b ENSDARG00000045485 1568 2.433 0.792 0.769 - - - - - - 0.872 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8b [Source:ZFIN;Acc:ZDB-GENE-040426-1338]
15. stac3 ENSDARG00000098883 1765 2.409 0.838 0.797 - - - 0.774 - - - SH3 and cysteine rich domain 3 [Source:ZFIN;Acc:ZDB-GENE-040801-248]
16. smyd2b ENSDARG00000005629 8181 2.388 0.787 0.818 - - - 0.783 - - - SET and MYND domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-041001-201]
17. ndufb6 ENSDARG00000037259 6515 2.385 0.778 0.721 - - - - 0.886 - - NADH:ubiquinone oxidoreductase subunit B [Source:ZFIN;Acc:ZDB-GENE-040426-1781]
18. PTPLA PTPLA 4044 2.381 0.749 0.828 - - - 0.804 - - -
19. sh3bgr ENSDARG00000021633 3498 2.37 0.761 0.815 - - - 0.794 - - - SH3 domain binding glutamate-rich protein [Source:ZFIN;Acc:ZDB-GENE-040801-27]
20. sucla2 ENSDARG00000005359 5992 2.362 0.747 0.723 - - - 0.892 - - - succinate-CoA ligase, ADP-forming, beta subunit [Source:ZFIN;Acc:ZDB-GENE-040426-1963]
21. chrna1 ENSDARG00000009021 2931 2.35 0.805 0.740 - - - 0.805 - - - cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
22. klhl40a ENSDARG00000039052 2537 2.341 0.781 0.732 - - - 0.828 - - - kelch-like family member 40a [Source:ZFIN;Acc:ZDB-GENE-050916-1]
23. eif2s3 ENSDARG00000008292 17051 2.34 0.773 0.757 - - - - 0.810 - - eukaryotic translation initiation factor 2, subunit 3 gamma [Source:ZFIN;Acc:ZDB-GENE-030131-5552]
24. si:ch211-242b18.1 ENSDARG00000054723 2929 2.339 0.754 0.790 - - - 0.795 - - - si:ch211-242b18.1 [Source:ZFIN;Acc:ZDB-GENE-030131-1518]
25. myod1 ENSDARG00000030110 6019 2.333 0.729 0.789 - - - 0.815 - - - myogenic differentiation 1 [Source:ZFIN;Acc:ZDB-GENE-980526-561]
26. prmt1 ENSDARG00000010246 11311 2.322 0.772 0.762 - - - 0.788 - - - protein arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-693]
27. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 2.316 0.783 0.791 - - - 0.742 - - - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
28. cacng1 cacng1 3118 2.313 0.781 0.727 - - - 0.805 - - -
29. sptb ENSDARG00000030490 7128 2.313 0.792 0.803 - - - 0.718 - - - spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
30. fitm1 ENSDARG00000056464 1759 2.303 0.752 0.749 - - - 0.802 - - - fat storage-inducing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-050306-28]
31. gypc ENSDARG00000041546 1487 2.303 0.708 0.723 - - - 0.872 - - - glycophorin C (Gerbich blood group) [Source:ZFIN;Acc:ZDB-GENE-030131-7930]
32. psma8 ENSDARG00000010965 8321 2.291 - - - - - 0.775 0.806 - 0.710 proteasome subunit alpha 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2194]
33. znf648 ENSDARG00000104823 1918 2.289 0.736 0.788 - - - 0.765 - - - zinc finger protein 648 [Source:ZFIN;Acc:ZDB-GENE-120215-149]
34. tnnt2d ENSDARG00000002988 7590 2.289 0.783 0.757 - - - 0.749 - - - troponin T2d, cardiac [Source:ZFIN;Acc:ZDB-GENE-050626-97]
35. lix1l ENSDARG00000063244 2061 2.287 0.712 - - - - 0.739 - - 0.836 limb and CNS expressed 1 like [Source:ZFIN;Acc:ZDB-GENE-060503-777]
36. NRAP ENSDARG00000009341 3565 2.287 0.784 0.709 - - - 0.794 - - - nebulin-related anchoring protein [Source:ZFIN;Acc:ZDB-GENE-060616-224]
37. hint1 ENSDARG00000103824, ENSDARG00000110789 8302 2.269 0.714 - - - - 0.788 - - 0.767 histidine triad nucleotide binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040927-8]
38. MYOT ENSDARG00000076312 1791 2.267 0.726 0.774 - - - 0.767 - - - myotilin [Source:ZFIN;Acc:ZDB-GENE-110411-129]
39. vwde ENSDARG00000103443 5758 2.258 0.701 0.796 - - - 0.761 - - - von Willebrand factor D and EGF domains [Source:ZFIN;Acc:ZDB-GENE-060929-1226]
40. lpl ENSDARG00000087697 2578 2.249 - 0.745 - 0.706 - 0.798 - - - lipoprotein lipase [Source:ZFIN;Acc:ZDB-GENE-990415-139]
41. ryr3 ENSDARG00000071331 6795 2.248 0.714 0.756 - - - 0.778 - - - ryanodine receptor 3 [Source:ZFIN;Acc:ZDB-GENE-041001-165]
42. PTP4A3 ENSDARG00000039997 3814 2.243 0.701 0.713 - - - 0.829 - - - protein tyrosine phosphatase type IVA, member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2220]
43. EHBP1L1 EHBP1L1 2500 2.232 0.702 0.788 - - - 0.742 - - -
44. TENC1 TENC1 1729 2.229 0.716 0.760 - - - 0.753 - - -
45. dnajc19 ENSDARG00000044420 1756 2.221 0.722 0.741 - - - 0.758 - - - DnaJ (Hsp40) homolog, subfamily C, member 19 [Source:ZFIN;Acc:ZDB-GENE-040426-1730]
46. myhc4 ENSDARG00000035438 1322 2.209 0.722 0.750 - - - 0.737 - - - myosin heavy chain 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6206]
47. kcnma1a ENSDARG00000079840 2584 2.206 0.720 0.722 - - - 0.764 - - - potassium large conductance calcium-activated channel, subfamily M, alpha member 1a [Source:ZFIN;Acc:ZDB-GENE-070202-9]
48. FHOD3_1 FHOD3_1 983 2.145 0.715 0.713 - - - 0.717 - - -
49. lin7c ENSDARG00000027322 3083 1.813 - - - - - - 0.948 - 0.865 lin-7 homolog C (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-041011-2]
50. dpp9 ENSDARG00000052606 2279 1.788 - 0.827 - - - - 0.961 - - dipeptidyl-peptidase 9 [Source:ZFIN;Acc:ZDB-GENE-061013-777]
51. lrp1b lrp1b 3216 1.784 - - - - - - 0.929 - 0.855
52. cbsb ENSDARG00000010946 5779 1.783 - - - - - 0.823 0.960 - - cystathionine-beta-synthase b [Source:ZFIN;Acc:ZDB-GENE-021030-3]
53. junbb ENSDARG00000104773 2536 1.763 - - - - - - 0.904 - 0.859 JunB proto-oncogene, AP-1 transcription factor subunit b [Source:ZFIN;Acc:ZDB-GENE-040426-2666]
54. gnl3 ENSDARG00000006219 3854 1.762 - 0.803 - - - - 0.959 - - guanine nucleotide binding protein-like 3 (nucleolar) [Source:ZFIN;Acc:ZDB-GENE-030131-616]
55. glud1a ENSDARG00000008816, ENSDARG00000114252 3468 1.757 - - - - - - 0.867 - 0.890 glutamate dehydrogenase 1a [Source:ZFIN;Acc:ZDB-GENE-030114-2]
56. auh ENSDARG00000042975 1841 1.752 - 0.790 - - - - 0.962 - - AU RNA binding protein/enoyl-CoA hydratase [Source:ZFIN;Acc:ZDB-GENE-040801-95]
57. klf6a ENSDARG00000029072 3758 1.752 - - - - - - 0.940 - 0.812 Kruppel-like factor 6a [Source:ZFIN;Acc:ZDB-GENE-021115-9]
58. PPP1R27 PPP1R27 646 1.741 - - - - - 0.767 0.974 - -
59. CNOT4 CNOT4 899 1.726 - 0.770 - - - - 0.956 - -
60. casc4 ENSDARG00000074490 2019 1.715 - 0.756 - - - - 0.959 - - cancer susceptibility candidate 4 [Source:ZFIN;Acc:ZDB-GENE-091130-1]
61. C2H6orf52 C2H6orf52 2847 1.706 - 0.753 - - - - 0.953 - -
62. kmt2bb ENSDARG00000060697 5230 1.706 - 0.744 - - - - 0.962 - - lysine (K)-specific methyltransferase 2Bb [Source:ZFIN;Acc:ZDB-GENE-080521-1]
63. BX294110.1 ENSDARG00000096875 1761 1.697 0.804 - - - - - - - 0.893
64. skp1 ENSDARG00000003151 8172 1.697 - - - - - 0.754 0.943 - - S-phase kinase-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1707]
65. rassf1 ENSDARG00000004840 1248 1.69 0.735 - - - - - 0.955 - - Ras association (RalGDS/AF-6) domain family 1 [Source:ZFIN;Acc:ZDB-GENE-040912-14]
66. tomm7 ENSDARG00000067717 4452 1.679 - - 0.709 - - - 0.970 - - translocase of outer mitochondrial membrane 7 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-060825-115]
67. bves ENSDARG00000058548 2291 1.676 0.709 - - - - - 0.967 - - blood vessel epicardial substance [Source:ZFIN;Acc:ZDB-GENE-040624-11]
68. lrpprc ENSDARG00000043970 3847 1.672 - 0.796 - - - - - - 0.876 leucine-rich pentatricopeptide repeat containing [Source:ZFIN;Acc:ZDB-GENE-030131-7887]
69. zgmrpl4 zgmrpl4 1754 1.671 0.718 - - - - - 0.953 - -
70. nexn ENSDARG00000057317 10972 1.668 0.805 - - - - 0.863 - - - nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
71. src ENSDARG00000008107 3643 1.667 - 0.709 - - - - 0.958 - - v-src avian sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-030131-3809]
72. casp3a ENSDARG00000017905, ENSDARG00000113754 2819 1.662 - 0.716 - - - - 0.946 - - caspase 3, apoptosis-related cysteine peptidase a [Source:ZFIN;Acc:ZDB-GENE-011210-1]
73. zgc:86811 ENSDARG00000035573 958 1.659 - 0.781 - - - - - - 0.878 zgc:86811 [Source:ZFIN;Acc:ZDB-GENE-040625-113]
74. mibp2 ENSDARG00000101844 17444 1.657 0.833 - - - - 0.824 - - - muscle-specific beta 1 integrin binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-031113-14]
75. wnk1b ENSDARG00000039392 3587 1.654 - 0.816 - - - - - - 0.838 WNK lysine deficient protein kinase 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2656]
76. cdon ENSDARG00000061328 1441 1.652 - 0.705 - - - - 0.947 - - cell adhesion associated, oncogene regulated [Source:ZFIN;Acc:ZDB-GENE-021115-4]
77. nhsl1b ENSDARG00000042627 3697 1.648 - 0.700 - - - - 0.948 - - NHS-like 1b [Source:ZFIN;Acc:ZDB-GENE-040910-1]
78. si:ch211-198j3.1 si:ch211-198j3.1 5487 1.647 - - - - - 0.752 0.895 - -
79. zgc:77086 ENSDARG00000014015 4908 1.645 0.736 - - - - - 0.909 - - zgc:77086 [Source:ZFIN;Acc:ZDB-GENE-040426-2238]
80. vbp1 ENSDARG00000030241 10619 1.645 - 0.810 - - - 0.835 - - - von Hippel-Lindau binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050522-494]
81. TRIM63 TRIM63 1600 1.639 - 0.735 - - - 0.904 - - -
82. zgc:158296 ENSDARG00000070923 3935 1.639 - 0.814 - - - 0.825 - - - zgc:158296 [Source:ZFIN;Acc:ZDB-GENE-070112-1272]
83. pvalb3 ENSDARG00000022817, ENSDARG00000117131 4180 1.638 - 0.847 - - - 0.791 - - - parvalbumin 3 [Source:ZFIN;Acc:ZDB-GENE-040426-945]
84. psmd12 ENSDARG00000052377 7763 1.633 - - - - - - - 0.739 0.894 proteasome 26S subunit, non-ATPase 12 [Source:ZFIN;Acc:ZDB-GENE-030131-617]
85. DNAJA4 ENSDARG00000051762 5657 1.631 - 0.827 - - - 0.804 - - - DnaJ heat shock protein family (Hsp40) member A4 [Source:HGNC Symbol;Acc:HGNC:14885]
86. Sep-12 Sep-12 1828 1.628 - 0.706 - - - - 0.922 - -
87. MRPS12_1 MRPS12_1 2714 1.627 - - - - - 0.745 - - 0.882
88. zgc:92518 ENSDARG00000016343 3837 1.625 0.799 - - - - 0.826 - - - zgc:92518 [Source:ZFIN;Acc:ZDB-GENE-040718-53]
89. znf592 ENSDARG00000060885 776 1.624 - 0.747 - - - - - - 0.877 zinc finger protein 592 [Source:ZFIN;Acc:ZDB-GENE-030131-9613]
90. HECW1 HECW1 1531 1.623 - - - - - 0.715 - - 0.908
91. zgc:101846 15202 1.621 0.764 - - - - - 0.857 - - zgc:101846
92. eif4bb ENSDARG00000010194, ENSDARG00000112432 12555 1.621 0.832 0.789 - - - - - - - eukaryotic translation initiation factor 4Bb [Source:ZFIN;Acc:ZDB-GENE-030131-8563]
93. rab5if ENSDARG00000074790 8807 1.621 - 0.748 - - - - - - 0.873 RAB5 interacting factor [Source:ZFIN;Acc:ZDB-GENE-030131-5938]
94. pygma ENSDARG00000055518 15972 1.616 0.790 0.826 - - - - - - - phosphorylase, glycogen, muscle A [Source:ZFIN;Acc:ZDB-GENE-050522-482]
95. flncb ENSDARG00000018820 5595 1.612 0.784 - - - - 0.828 - - - filamin C, gamma b (actin binding protein 280) [Source:ZFIN;Acc:ZDB-GENE-041008-175]
96. txn2 ENSDARG00000034777 4071 1.602 0.701 0.901 - - - - - - - thioredoxin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1795]
97. dtnba ENSDARG00000077694 5483 1.6 0.766 0.834 - - - - - - - dystrobrevin, beta a [Source:ZFIN;Acc:ZDB-GENE-030131-3967]
98. lnpa ENSDARG00000063646, ENSDARG00000115902 2373 1.597 - 0.819 - - - 0.778 - - - limb and neural patterns a [Source:ZFIN;Acc:ZDB-GENE-030131-4960]
99. ppp5c ENSDARG00000034313 8794 1.596 - - - - - 0.825 0.771 - - protein phosphatase 5, catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-050327-75]
100. klhl41b ENSDARG00000006757 10762 1.595 0.771 - - - - 0.824 - - - kelch-like family member 41b [Source:ZFIN;Acc:ZDB-GENE-030131-9875]

There are 1452 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA