Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for pfdn1

Gene Name Gene ID Reads Annotation
pfdn1 ENSDARG00000014536 6969 prefoldin subunit 1 [Source:ZFIN;Acc:ZDB-GENE-050306-50]










Genes with expression patterns similar to pfdn1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pfdn1 ENSDARG00000014536 6969 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 prefoldin subunit 1 [Source:ZFIN;Acc:ZDB-GENE-050306-50]
2. srsf11 ENSDARG00000098574 12801 2.661 - - 0.777 0.918 - 0.966 - - - serine/arginine-rich splicing factor 11 [Source:ZFIN;Acc:ZDB-GENE-030131-605]
3. zc4h2 ENSDARG00000015314, ENSDARG00000112180 5141 2.581 - 0.714 - 0.957 - - 0.910 - - zinc finger, C4H2 domain containing [Source:ZFIN;Acc:ZDB-GENE-030131-2207]
4. tomm5 ENSDARG00000068265 11813 2.555 0.749 0.987 0.819 - - - - - - translocase of outer mitochondrial membrane 5 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040724-90]
5. zgc:101846 15202 2.38 0.718 - - 0.862 - - 0.800 - - zgc:101846
6. uqcrc1 ENSDARG00000052304, ENSDARG00000110068 13973 2.209 0.717 - 0.780 - - 0.712 - - - ubiquinol-cytochrome c reductase core protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1792]
7. tjp1a ENSDARG00000077506 2658 1.972 - - - 0.981 - 0.991 - - - tight junction protein 1a [Source:ZFIN;Acc:ZDB-GENE-031001-2]
8. rb1 ENSDARG00000006782 1445 1.971 - - - 0.984 - 0.987 - - - retinoblastoma 1 [Source:ZFIN;Acc:ZDB-GENE-040428-1]
9. tomm7 ENSDARG00000067717 4452 1.926 - - - - - 0.996 0.930 - - translocase of outer mitochondrial membrane 7 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-060825-115]
10. crb3b ENSDARG00000068182 683 1.919 - - - - - 0.988 0.931 - - crumbs homolog 3b [Source:ZFIN;Acc:ZDB-GENE-060610-3]
11. strap ENSDARG00000007405 6426 1.91 - - - 0.985 - - 0.925 - - serine/threonine kinase receptor associated protein [Source:ZFIN;Acc:ZDB-GENE-040426-1110]
12. nup98 ENSDARG00000074955 3998 1.91 - - - 0.976 - - 0.934 - - nucleoporin 98 [Source:ZFIN;Acc:ZDB-GENE-040426-1180]
13. eif3s10 ENSDARG00000076815 10822 1.9 - - - 0.962 - - 0.938 - - eukaryotic translation initiation factor 3, subunit 10 (theta) [Source:ZFIN;Acc:ZDB-GENE-030131-5726]
14. nop2 ENSDARG00000043304 2511 1.891 - - 0.908 0.983 - - - - - NOP2 nucleolar protein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-050309-7]
15. rbm4.2 ENSDARG00000055080 5241 1.89 - - - - - 0.974 0.916 - - RNA binding motif protein 4.2 [Source:ZFIN;Acc:ZDB-GENE-030131-3019]
16. si:ch211-114c12.2 ENSDARG00000028542, ENSDARG00000111053 5495 1.888 - - - - - 0.986 0.902 - - si:ch211-114c12.2 [Source:ZFIN;Acc:ZDB-GENE-030131-8522]
17. dag1 ENSDARG00000016153 10886 1.884 - - - 0.951 - - 0.933 - - dystroglycan 1 [Source:ZFIN;Acc:ZDB-GENE-021223-1]
18. brd7 ENSDARG00000008380 3654 1.879 - - 0.903 0.976 - - - - - bromodomain containing 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2687]
19. QPCT ENSDARG00000089717 1383 1.869 - - - - - 0.985 0.884 - - glutaminyl-peptide cyclotransferase [Source:ZFIN;Acc:ZDB-GENE-130827-1]
20. tex2 ENSDARG00000078186 2467 1.856 - - - - - 0.987 0.869 - - testis expressed 2 [Source:ZFIN;Acc:ZDB-GENE-070615-7]
21. ywhah ENSDARG00000005560 11079 1.822 - - 0.837 - - 0.985 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide [Source:ZFIN;Acc:ZDB-GENE-040426-2191]
22. C2CD2 ENSDARG00000105000 2573 1.818 - - 0.905 - - - 0.913 - - C2 calcium-dependent domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-110728-1]
23. clint1a ENSDARG00000025535 4965 1.812 - - 0.845 - - 0.967 - - - clathrin interactor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2590]
24. sepw2a 8597 1.795 - - - 0.968 - - 0.827 - - selenoprotein W, 2a
25. naa10 ENSDARG00000071060, ENSDARG00000111093, ENSDARG00000116173 4657 1.788 0.800 - - 0.988 - - - - - N(alpha)-acetyltransferase 10, NatA catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-040426-2648]
26. zgc:77086 ENSDARG00000014015 4908 1.783 - - 0.895 - - - 0.888 - - zgc:77086 [Source:ZFIN;Acc:ZDB-GENE-040426-2238]
27. zgc:77439 ENSDARG00000039211 1492 1.783 - - - - - 0.979 0.804 - - zgc:77439 [Source:ZFIN;Acc:ZDB-GENE-031010-24]
28. AL929434.1 AL929434.1 3294 1.783 - - 0.796 - - 0.987 - - -
29. ptprfb ENSDARG00000005754 7178 1.768 - - 0.807 0.961 - - - - - protein tyrosine phosphatase, receptor type, f, b [Source:ZFIN;Acc:ZDB-GENE-060503-530]
30. lsm4 ENSDARG00000023852 6083 1.758 - - 0.855 - - - 0.903 - - LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-040426-1652]
31. gas1a ENSDARG00000077298 10891 1.756 - - - 0.901 - - 0.855 - - growth arrest-specific 1a [Source:ZFIN;Acc:ZDB-GENE-050302-155]
32. arpc4l ENSDARG00000058225 10107 1.735 - - 0.803 0.932 - - - - - actin related protein 2/3 complex, subunit 4, like [Source:ZFIN;Acc:ZDB-GENE-040808-18]
33. edf1 ENSDARG00000009950 10518 1.73 0.766 - - 0.964 - - - - - endothelial differentiation-related factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1710]
34. cdca8 ENSDARG00000043137 7541 1.724 - 0.986 0.738 - - - - - - cell division cycle associated 8 [Source:ZFIN;Acc:ZDB-GENE-041114-171]
35. eif4ebp3l ENSDARG00000041607 5257 1.717 - - - - - 0.994 0.723 - - eukaryotic translation initiation factor 4E binding protein 3, like [Source:ZFIN;Acc:ZDB-GENE-030826-26]
36. CABZ01079490.1 CABZ01079490.1 1808 1.708 - 0.718 - - - 0.990 - - -
37. eef1b2 ENSDARG00000044521 26570 1.7 0.734 - - 0.966 - - - - - eukaryotic translation elongation factor 1 beta 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7310]
38. minos1 ENSDARG00000101619 5273 1.698 0.720 - - - - 0.978 - - - mitochondrial inner membrane organizing system 1 [Source:ZFIN;Acc:ZDB-GENE-060825-325]
39. CPEB4 CPEB4 3249 1.697 - 0.705 - - - 0.992 - - -
40. emc3 ENSDARG00000020607 3406 1.695 - 0.716 - 0.979 - - - - - ER membrane protein complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2904]
41. si:dkeyp-44a8.2 ENSDARG00000092493 8308 1.694 - - 0.710 - - 0.984 - - - si:dkeyp-44a8.2 [Source:ZFIN;Acc:ZDB-GENE-070705-542]
42. sdha ENSDARG00000016721 8255 1.693 0.730 - - 0.963 - - - - - succinate dehydrogenase complex, subunit A, flavoprotein (Fp) [Source:ZFIN;Acc:ZDB-GENE-040426-874]
43. arpc4 ENSDARG00000054063 6150 1.693 - - - 0.974 - - - - 0.719 actin related protein 2/3 complex, subunit 4 [Source:ZFIN;Acc:ZDB-GENE-010724-9]
44. palm1a ENSDARG00000026882, ENSDARG00000115356 3425 1.693 0.701 - - - - 0.992 - - - paralemmin 1a [Source:ZFIN;Acc:ZDB-GENE-050417-409]
45. akap12b ENSDARG00000055678, ENSDARG00000110544 8317 1.687 0.714 - - 0.973 - - - - - A kinase (PRKA) anchor protein 12b [Source:ZFIN;Acc:ZDB-GENE-030131-9753]
46. ppp3ccb ENSDARG00000057456, ENSDARG00000116250 6265 1.683 0.713 - - 0.970 - - - - - protein phosphatase 3, catalytic subunit, gamma isozyme, b [Source:ZFIN;Acc:ZDB-GENE-070112-1102]
47. CORO1C CORO1C 5554 1.681 0.749 - - - - - 0.932 - -
48. fgfr2 ENSDARG00000058115 6743 1.679 - 0.700 - 0.979 - - - - - fibroblast growth factor receptor 2 [Source:ZFIN;Acc:ZDB-GENE-030323-1]
49. PSIP1 PSIP1 5252 1.677 0.790 - 0.887 - - - - - -
50. psma3 ENSDARG00000086618 6200 1.677 - 0.708 - 0.969 - - - - - proteasome subunit alpha 3 [Source:ZFIN;Acc:ZDB-GENE-050913-120]
51. NDUFC2 ENSDARG00000102115 7848 1.675 0.785 - 0.890 - - - - - - NADH:ubiquinone oxidoreductase subunit C2 [Source:ZFIN;Acc:ZDB-GENE-050320-87]
52. rps11 ENSDARG00000053058 16233 1.669 - - 0.807 0.862 - - - - - ribosomal protein S11 [Source:ZFIN;Acc:ZDB-GENE-040426-2701]
53. taldo1 ENSDARG00000103369 3804 1.668 - - - 0.967 - - 0.701 - - transaldolase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3277]
54. zgmrpl4 zgmrpl4 1754 1.665 0.734 - - - - - 0.931 - -
55. hfe2 4113 1.665 0.717 - - - - - 0.948 - - hemochromatosis type 2
56. thbs4a ENSDARG00000102777 625 1.656 - 0.719 - - - - 0.937 - - thrombospondin 4a [Source:ZFIN;Acc:ZDB-GENE-080215-11]
57. cyb5r3 ENSDARG00000005891 4440 1.652 - - - - - 0.845 0.807 - - cytochrome b5 reductase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3281]
58. ppib ENSDARG00000092798 21969 1.65 - - - - - 0.726 0.924 - - peptidylprolyl isomerase B (cyclophilin B) [Source:ZFIN;Acc:ZDB-GENE-040426-1955]
59. setbp1 ENSDARG00000093799 4499 1.643 - 0.716 - - - - 0.927 - - SET binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060526-72]
60. C2H6orf52 C2H6orf52 2847 1.642 - - - - - - 0.939 - 0.703
61. rpl32 ENSDARG00000054818, ENSDARG00000110237, ENSDARG00000115707 37036 1.64 0.816 - - 0.824 - - - - - ribosomal protein L32 [Source:ZFIN;Acc:ZDB-GENE-060331-105]
62. eef1da ENSDARG00000102291 9339 1.637 0.789 - - - - - 0.848 - - eukaryotic translation elongation factor 1 delta a (guanine nucleotide exchange protein) [Source:ZFIN;Acc:ZDB-GENE-040426-2740]
63. txlnbb ENSDARG00000076241 6396 1.632 0.727 - - 0.905 - - - - - taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
64. AIMP1 ENSDARG00000060036 4136 1.629 0.732 - - - - - 0.897 - - aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 [Source:ZFIN;Acc:ZDB-GENE-060825-144]
65. lin7c ENSDARG00000027322 3083 1.628 0.709 - - - - - 0.919 - - lin-7 homolog C (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-041011-2]
66. ecm2 ENSDARG00000071549 1527 1.627 - - 0.877 - - - 0.750 - - extracellular matrix protein 2, female organ and adipocyte specific [Source:ZFIN;Acc:ZDB-GENE-050208-651]
67. smyd1b ENSDARG00000091253 4964 1.624 0.711 - - - - - 0.913 - - SET and MYND domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-060522-1]
68. zc3h14 ENSDARG00000041402, ENSDARG00000109544 2477 1.622 - 0.712 0.910 - - - - - - zinc finger CCCH-type containing 14 [Source:ZFIN;Acc:ZDB-GENE-041014-257]
69. AP2A1 ENSDARG00000054320 5591 1.618 - - 0.812 - - 0.806 - - - adaptor related protein complex 2 subunit alpha 1 [Source:ZFIN;Acc:ZDB-GENE-090302-2]
70. psmd7 ENSDARG00000102417 4732 1.618 0.731 - 0.887 - - - - - - proteasome 26S subunit, non-ATPase 7 [Source:ZFIN;Acc:ZDB-GENE-030131-5541]
71. si:ch211-198j3.1 si:ch211-198j3.1 5487 1.595 - - - - - - 0.846 - 0.749
72. met ENSDARG00000070903 2088 1.577 - 0.707 - - - - 0.870 - - MET proto-oncogene, receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-041014-1]
73. got2b ENSDARG00000005840 7891 1.565 - - - - - 0.741 0.824 - - glutamic-oxaloacetic transaminase 2b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-7917]
74. ndufb6 ENSDARG00000037259 6515 1.543 0.728 - - - - - 0.815 - - NADH:ubiquinone oxidoreductase subunit B [Source:ZFIN;Acc:ZDB-GENE-040426-1781]
75. rab1a rab1a 14138 1.524 - - 0.807 - - - 0.717 - -
76. C1QBP ENSDARG00000039887 11186 1.521 0.813 - 0.708 - - - - - - complement component 1, q subcomponent binding protein [Source:ZFIN;Acc:ZDB-GENE-050417-408]
77. cct3 ENSDARG00000016173 15869 1.51 0.767 - - - - 0.743 - - - chaperonin containing TCP1, subunit 3 (gamma) [Source:ZFIN;Acc:ZDB-GENE-020419-5]
78. ndufb9 ENSDARG00000041314, ENSDARG00000112557 15434 1.488 - - - - 0.749 - - - 0.739 NADH:ubiquinone oxidoreductase subunit B9 [Source:ZFIN;Acc:ZDB-GENE-030131-8364]
79. sar1ab ENSDARG00000033320 3984 1.484 0.770 0.714 - - - - - - - secretion associated, Ras related GTPase 1Ab [Source:ZFIN;Acc:ZDB-GENE-050417-437]
80. uba1 ENSDARG00000037559 11579 1.482 0.724 - 0.758 - - - - - - ubiquitin-like modifier activating enzyme 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2009]
81. zgc:193541 ENSDARG00000092873 21276 1.479 0.720 - - 0.759 - - - - - zgc:193541 [Source:ZFIN;Acc:ZDB-GENE-081022-15]
82. EIF4G1 EIF4G1 19676 1.475 0.733 - - - - - 0.742 - -
83. eno1a ENSDARG00000022456, ENSDARG00000116458 14401 1.459 0.746 - - - - 0.713 - - - enolase 1a, (alpha) [Source:ZFIN;Acc:ZDB-GENE-030131-6048]
84. whsc1l1 8544 1.432 - 0.711 0.721 - - - - - - Wolf-Hirschhorn syndrome candidate 1-like 1, transcript variant X2
85. kars ENSDARG00000103799 20937 1.426 0.725 - - - - - - - 0.701 lysyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-021115-8]
86. vdac2 ENSDARG00000013623 37765 1.422 0.713 - 0.709 - - - - - - voltage-dependent anion channel 2 [Source:ZFIN;Acc:ZDB-GENE-030131-845]
87. tmpoa ENSDARG00000007315 3638 1.421 0.709 0.712 - - - - - - - thymopoietin a [Source:ZFIN;Acc:ZDB-GENE-030131-6003]
88. rsu1 ENSDARG00000102885 3604 1.414 0.703 0.711 - - - - - - - Ras suppressor protein 1 [Source:ZFIN;Acc:ZDB-GENE-030616-518]
89. dyrk2 ENSDARG00000094646 2163 0.993 - - - - - 0.993 - - - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-2804]
90. cry2a cry2a 2728 0.993 - - - - - 0.993 - - -
91. map1lc3b ENSDARG00000101127 3958 0.993 - - - - - 0.993 - - - microtubule-associated protein 1 light chain 3 beta [Source:ZFIN;Acc:ZDB-GENE-030131-1145]
92. glra4a ENSDARG00000006865, ENSDARG00000109562 1117 0.993 - - - - - 0.993 - - - glycine receptor, alpha 4a [Source:ZFIN;Acc:ZDB-GENE-010410-3]
93. vash2 ENSDARG00000007774 2537 0.993 - - - - - 0.993 - - - vasohibin 2 [Source:ZFIN;Acc:ZDB-GENE-041014-355]
94. rpl10 ENSDARG00000025581, ENSDARG00000115128, ENSDARG00000117015 6574 0.992 - 0.992 - - - - - - - ribosomal protein L10 [Source:ZFIN;Acc:ZDB-GENE-030131-8656]
95. ndufa12 ENSDARG00000042469, ENSDARG00000116793 3843 0.992 - - - - - 0.992 - - - NADH:ubiquinone oxidoreductase subunit A12 [Source:ZFIN;Acc:ZDB-GENE-050828-1]
96. GPANK1 ENSDARG00000053995 1535 0.991 - - - - - 0.991 - - - G patch domain and ankyrin repeats 1 [Source:ZFIN;Acc:ZDB-GENE-070928-32]
97. ptgesl ENSDARG00000068415, ENSDARG00000110236 1718 0.991 - - - - - 0.991 - - - prostaglandin E synthase 2-like [Source:ZFIN;Acc:ZDB-GENE-040426-1063]
98. jph1b ENSDARG00000038826 7416 0.991 - - - - - 0.991 - - - junctophilin 1b [Source:ZFIN;Acc:ZDB-GENE-060616-389]
99. irf2bp2a ENSDARG00000004702 6719 0.991 - - - - - 0.991 - - - interferon regulatory factor 2 binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7809]
100. GOLM1 GOLM1 1845 0.991 - - - - - 0.991 - - -

There are 967 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA