Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for per3

Gene Name Gene ID Reads Annotation
per3 ENSDARG00000010519 331 period circadian clock 3 [Source:ZFIN;Acc:ZDB-GENE-000804-1]










Genes with expression patterns similar to per3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. per3 ENSDARG00000010519 331 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 period circadian clock 3 [Source:ZFIN;Acc:ZDB-GENE-000804-1]
2. slc6a6a ENSDARG00000012534 183 1.696 0.751 - - - - - - 0.945 - solute carrier family 6 (neurotransmitter transporter), member 6a [Source:ZFIN;Acc:ZDB-GENE-081104-1]
3. CR381544.1 ENSDARG00000088187 821 1.671 0.721 - - - - - - 0.950 -
4. eapp ENSDARG00000017272 404 1.654 - - - - - 0.844 - 0.810 - e2f-associated phosphoprotein [Source:ZFIN;Acc:ZDB-GENE-030131-5529]
5. rdh8b ENSDARG00000105060 183 1.602 0.769 - - - - - - 0.833 - retinol dehydrogenase 8b [Source:ZFIN;Acc:ZDB-GENE-040426-1759]
6. thap11 ENSDARG00000036055 238 1.569 0.837 - - - - - 0.732 - - THAP domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-040426-2121]
7. nfkb2 ENSDARG00000038687, ENSDARG00000112821 468 1.54 0.837 0.703 - - - - - - - nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100) [Source:ZFIN;Acc:ZDB-GENE-030131-6701]
8. rab11fip1a ENSDARG00000046124 69 1.42 0.704 0.716 - - - - - - - RAB11 family interacting protein 1 (class I) a [Source:ZFIN;Acc:ZDB-GENE-051113-116]
9. BX511021.1 ENSDARG00000073936 647 0.964 - - - - - - - 0.964 - ferritin, middle subunit-like [Source:NCBI gene;Acc:100006428]
10. BX005410.2 BX005410.2 44 0.963 - - - - - - - 0.963 -
11. CABZ01045230.1 CABZ01045230.1 158 0.961 - - - - - - - 0.961 -
12. si:dkey-157e10.7 si:dkey-157e10.7 105 0.961 - - - - - - - 0.961 -
13. SHANK1 ENSDARG00000060539 102 0.961 - - - - - - - 0.961 - SH3 and multiple ankyrin repeat domains 1 [Source:ZFIN;Acc:ZDB-GENE-130530-691]
14. PIGB ENSDARG00000105011 277 0.961 0.961 - - - - - - - - phosphatidylinositol glycan anchor biosynthesis, class B [Source:ZFIN;Acc:ZDB-GENE-040426-1216]
15. ly75 ENSDARG00000053113 196 0.96 - - - - - - - 0.960 - lymphocyte antigen 75 [Source:ZFIN;Acc:ZDB-GENE-050309-166]
16. si:ch211-283g2.2 ENSDARG00000108340, ENSDARG00000108953 59 0.959 - - - - - - - 0.959 - si:ch211-283g2.2 [Source:ZFIN;Acc:ZDB-GENE-060526-151]
17. C20H1orf112 C20H1orf112 316 0.959 - - - - - - - 0.959 -
18. pde6b ENSDARG00000011671 44 0.958 - - - - - - - 0.958 - phosphodiesterase 6B, cGMP-specific, rod, beta [Source:ZFIN;Acc:ZDB-GENE-090421-2]
19. prkag3b ENSDARG00000000369 1945 0.958 - - - - - - - 0.958 - protein kinase, AMP-activated, gamma 3b non-catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-060421-6938]
20. pex5la ENSDARG00000022518, ENSDARG00000109971, ENSDARG00000110029, ENSDARG00000112628 28 0.958 - - - - - - - 0.958 - peroxisomal biogenesis factor 5-like a [Source:ZFIN;Acc:ZDB-GENE-070705-298]
21. ankdd1b ENSDARG00000025866 51 0.958 - - - - - - - 0.958 - ankyrin repeat and death domain containing 1B [Source:ZFIN;Acc:ZDB-GENE-060526-136]
22. jam3a ENSDARG00000114589 630 0.958 - - - - - - - 0.958 - junctional adhesion molecule 3a [Source:ZFIN;Acc:ZDB-GENE-070424-177]
23. si:ch73-167f18.3 si:ch73-167f18.3 78 0.958 - - - - - - - 0.958 -
24. adcyap1a ENSDARG00000004015 67 0.958 - - - - - - - 0.958 - adenylate cyclase activating polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-020809-4]
25. IKZF4 ENSDARG00000037068 36 0.958 - - - - - - - 0.958 - IKAROS family zinc finger 4 [Source:ZFIN;Acc:ZDB-GENE-180319-1]
26. si:dkey-100h21.2 si:dkey-100h21.2 30 0.958 - - - - - - - 0.958 -
27. b3galtla b3galtla 111 0.957 - - - - - - - 0.957 -
28. zgc:174877 ENSDARG00000079278 143 0.957 - - - - - - - 0.957 - zgc:174877 [Source:ZFIN;Acc:ZDB-GENE-041008-66]
29. CIT CIT 212 0.957 - - - - - - - 0.957 -
30. mea1 ENSDARG00000039820 589 0.957 - - - - - - - 0.957 - male-enhanced antigen 1 [Source:ZFIN;Acc:ZDB-GENE-070424-117]
31. mir130b 180 0.957 - - - - - - - 0.957 - microRNA 130b
32. spef2 ENSDARG00000098330 59 0.957 - - - - - - - 0.957 - sperm flagellar 2 [Source:ZFIN;Acc:ZDB-GENE-060526-47]
33. TTF1_4 TTF1_4 504 0.957 - - - - - - - 0.957 -
34. GDPD4_1 GDPD4_1 190 0.956 - - - - - - - 0.956 -
35. VDAC3 ENSDARG00000003695 34 0.956 - - - - - - - 0.956 - voltage-dependent anion channel 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2380]
36. pars2 ENSDARG00000044404, ENSDARG00000109425 271 0.956 - - - - - - - 0.956 - prolyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-4219]
37. ypel2b ENSDARG00000087258, ENSDARG00000116766 539 0.955 - - - - - - - 0.955 - yippee-like 2b [Source:ZFIN;Acc:ZDB-GENE-110419-2]
38. POLQ ENSDARG00000044622, ENSDARG00000110374 94 0.955 - - - - - - - 0.955 - polymerase (DNA directed), theta [Source:ZFIN;Acc:ZDB-GENE-040724-232]
39. MAP7 MAP7 98 0.955 - - - - - - - 0.955 -
40. hoxa4a 37 0.955 - - - - - - - 0.955 - homeobox A4a, transcript variant X4
41. rpgra ENSDARG00000056617 77 0.954 - - - - - - - 0.954 - retinitis pigmentosa GTPase regulator a [Source:ZFIN;Acc:ZDB-GENE-070912-423]
42. KBTBD13_1 KBTBD13_1 116 0.954 - - - - - - - 0.954 -
43. pdlim3b ENSDARG00000014248, ENSDARG00000111275 708 0.954 - - - - - - - 0.954 - PDZ and LIM domain 3b [Source:ZFIN;Acc:ZDB-GENE-060130-104]
44. si:dkey-17e6.2 si:dkey-17e6.2 72 0.953 - - - - - - - 0.953 -
45. nrxn2b ENSDARG00000063150 343 0.952 - - - - - - - 0.952 - neurexin 2b [Source:ZFIN;Acc:ZDB-GENE-070206-7]
46. pus7 ENSDARG00000031774 195 0.952 - - - - - - - 0.952 - pseudouridylate synthase 7 [Source:ZFIN;Acc:ZDB-GENE-060620-1]
47. chrna3 ENSDARG00000100991, ENSDARG00000116434 63 0.951 - - - - - - - 0.951 - cholinergic receptor, nicotinic, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-070822-1]
48. rwdd2b ENSDARG00000055426 294 0.95 - - - - - - - 0.950 - RWD domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-041001-119]
49. tarsl2 ENSDARG00000092774 505 0.95 - - - - - - - 0.950 - threonyl-tRNA synthetase-like 2 [Source:ZFIN;Acc:ZDB-GENE-081104-490]
50. p2rx3b ENSDARG00000029718 105 0.95 - - - - - - - 0.950 - purinergic receptor P2X, ligand-gated ion channel, 3b [Source:ZFIN;Acc:ZDB-GENE-030319-3]
51. pard3 pard3 161 0.95 - - - - - - - 0.950 -
52. enosf1 ENSDARG00000038359 209 0.948 - - - - - - - 0.948 - enolase superfamily member 1 [Source:ZFIN;Acc:ZDB-GENE-060929-780]
53. ANGPT4 ENSDARG00000076787 140 0.948 - - - - - - - 0.948 - angiopoietin 4 [Source:ZFIN;Acc:ZDB-GENE-110104-1]
54. ncoa6 ENSDARG00000071272 759 0.948 - - - - - - - 0.948 - nuclear receptor coactivator 6 [Source:ZFIN;Acc:ZDB-GENE-080403-12]
55. aatkb ENSDARG00000104442 392 0.946 - - - - - - - 0.946 - apoptosis-associated tyrosine kinase b [Source:ZFIN;Acc:ZDB-GENE-100812-6]
56. hn1a hn1a 115 0.946 - - - - - - - 0.946 -
57. si:dkey-8k3.2 ENSDARG00000038424 285 0.945 - - - - - - - 0.945 - si:dkey-8k3.2 [Source:ZFIN;Acc:ZDB-GENE-100922-98]
58. usp4 ENSDARG00000014770 1684 0.945 - - - - - - - 0.945 - ubiquitin specific peptidase 4 (proto-oncogene) [Source:ZFIN;Acc:ZDB-GENE-041008-187]
59. HYKK HYKK 261 0.945 - - - - - - - 0.945 -
60. zgc:174688 zgc:174688 170 0.945 - - - - - - - 0.945 -
61. TFPT ENSDARG00000089572, ENSDARG00000111694 112 0.945 - - - - - - - 0.945 - TCF3 (E2A) fusion partner [Source:ZFIN;Acc:ZDB-GENE-140106-241]
62. camk2d1 ENSDARG00000043010 669 0.944 - - - - - - - 0.944 - calcium/calmodulin-dependent protein kinase (CaM kinase) II delta 1 [Source:ZFIN;Acc:ZDB-GENE-040801-121]
63. ALPK1 195 0.944 - - - - - - - 0.944 - alpha-kinase 1
64. si:dkey-253d23.2 ENSDARG00000071589 143 0.944 - - - - - - - 0.944 - si:dkey-253d23.2 [Source:ZFIN;Acc:ZDB-GENE-050208-410]
65. commd1 ENSDARG00000031203 340 0.942 - - - - - - - 0.942 - copper metabolism (Murr1) domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060512-329]
66. reep1 ENSDARG00000014854 915 0.942 - - - - - - - 0.942 - receptor accessory protein 1 [Source:ZFIN;Acc:ZDB-GENE-110411-267]
67. nrp2b ENSDARG00000038446 783 0.942 - - - - - - - 0.942 - neuropilin 2b [Source:ZFIN;Acc:ZDB-GENE-040611-3]
68. nrg2a ENSDARG00000077818 854 0.939 - - - - - - - 0.939 - neuregulin 2a [Source:ZFIN;Acc:ZDB-GENE-070615-10]
69. pdxka ENSDARG00000088959 217 0.938 - - - - - - - 0.938 - pyridoxal (pyridoxine, vitamin B6) kinase a [Source:ZFIN;Acc:ZDB-GENE-030131-8376]
70. pex16 ENSDARG00000058202 486 0.937 - - - - - - - 0.937 - peroxisomal biogenesis factor 16 [Source:ZFIN;Acc:ZDB-GENE-050626-49]
71. adora1 adora1 149 0.937 - - - - - - - 0.937 -
72. dclk1a ENSDARG00000018856 177 0.937 - - - - - - - 0.937 - doublecortin-like kinase 1a [Source:ZFIN;Acc:ZDB-GENE-061013-124]
73. TCAIM ENSDARG00000079881 424 0.936 - - - - - - - 0.936 - T cell activation inhibitor, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-160113-67]
74. cyp4v8 ENSDARG00000062132, ENSDARG00000111608 92 0.936 - - - - - - - 0.936 - cytochrome P450, family 4, subfamily V, polypeptide 8 [Source:ZFIN;Acc:ZDB-GENE-061103-601]
75. reep3l reep3l 608 0.935 - - - - - - - 0.935 -
76. smarcd2 ENSDARG00000088877 416 0.935 - - - - - - - 0.935 - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 [Source:ZFIN;Acc:ZDB-GENE-080215-1]
77. fgf12a ENSDARG00000027957 143 0.934 - - - - - - - 0.934 - fibroblast growth factor 12a [Source:ZFIN;Acc:ZDB-GENE-050221-6]
78. si:dkey-169l5.3 si:dkey-169l5.3 239 0.934 - - - - - - - 0.934 -
79. timm10 ENSDARG00000069116 4459 0.932 - - - - - - - 0.932 - translocase of inner mitochondrial membrane 10 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-427]
80. IPP ENSDARG00000075339 194 0.93 - - - - - - - 0.930 - intracisternal A particle-promoted polypeptide [Source:ZFIN;Acc:ZDB-GENE-080204-28]
81. CR790363.1 ENSDARG00000097364 145 0.929 - - - - - - - 0.929 -
82. LMOD3 ENSDARG00000062662, ENSDARG00000115769 456 0.929 - - - - - - - 0.929 - leiomodin 3 (fetal) [Source:ZFIN;Acc:ZDB-GENE-090313-353]
83. STON1 368 0.928 0.928 - - - - - - - - stonin 1
84. EPS8L2 ENSDARG00000058108 484 0.927 - - - - - - - 0.927 - EPS8 like 2 [Source:ZFIN;Acc:ZDB-GENE-131121-340]
85. zgc:122979 ENSDARG00000004187 61 0.927 - - - - - - - 0.927 - zgc:122979 [Source:ZFIN;Acc:ZDB-GENE-051127-45]
86. si:ch211-216l23.2 ENSDARG00000069122, ENSDARG00000115838 1365 0.926 - - - - - - - 0.926 - si:ch211-216l23.2 [Source:ZFIN;Acc:ZDB-GENE-030131-3806]
87. NHSL2 ENSDARG00000089066 374 0.926 - - - - - - - 0.926 - NHS-like 2 [Source:ZFIN;Acc:ZDB-GENE-130530-951]
88. CABZ01080599.2 CABZ01080599.2 192 0.926 - - - - - - - 0.926 -
89. si:ch73-387e10.3 si:ch73-387e10.3 517 0.923 - - - - - - - 0.923 -
90. hace1 ENSDARG00000062280 556 0.922 0.922 - - - - - - - - HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 [Source:ZFIN;Acc:ZDB-GENE-110411-52]
91. zgc:162948 ENSDARG00000053695 301 0.921 - - - - - - - 0.921 - zgc:162948 [Source:ZFIN;Acc:ZDB-GENE-070424-46]
92. si:ch73-73d17.3 si:ch73-73d17.3 925 0.921 - - - - - - - 0.921 -
93. tmem161b ENSDARG00000055989 680 0.92 - - - - - - - 0.920 - transmembrane protein 161B [Source:ZFIN;Acc:ZDB-GENE-040426-2693]
94. ptpdc1 ptpdc1 281 0.919 - - - - - - - 0.919 -
95. C8H17orf59 C8H17orf59 494 0.918 - - - - - - - 0.918 -
96. tmie ENSDARG00000069423 305 0.917 - - - - - - - 0.917 - transmembrane inner ear [Source:ZFIN;Acc:ZDB-GENE-061207-9]
97. pnn ENSDARG00000015851 1269 0.917 - - - - - - - 0.917 - pinin, desmosome associated protein [Source:ZFIN;Acc:ZDB-GENE-060519-3]
98. ENSDARG00000029117 ENSDARG00000029117 80 0.917 - - - - - - - 0.917 -
99. git2a ENSDARG00000061915 884 0.916 - - - - - - - 0.916 - G protein-coupled receptor kinase interacting ArfGAP 2a [Source:ZFIN;Acc:ZDB-GENE-060526-267]
100. CABZ01003826.1 CABZ01003826.1 486 0.916 - - - - - - - 0.916 -

There are 596 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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