Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for per1b

Gene Name Gene ID Reads Annotation
per1b ENSDARG00000012499 320 period circadian clock 1b [Source:ZFIN;Acc:ZDB-GENE-040419-1]










Genes with expression patterns similar to per1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. per1b ENSDARG00000012499 320 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 period circadian clock 1b [Source:ZFIN;Acc:ZDB-GENE-040419-1]
2. tbx18 ENSDARG00000036930 390 2.507 - 0.806 - - - 0.723 - - 0.978 T-box 18 [Source:ZFIN;Acc:ZDB-GENE-020529-2]
3. alpk3a ENSDARG00000078989 1992 2.398 0.715 0.822 - - - - - - 0.861 alpha-kinase 3a [Source:ZFIN;Acc:ZDB-GENE-050419-48]
4. ttc38 ENSDARG00000042188, ENSDARG00000113493 307 1.867 - - - - - - 0.875 - 0.992 tetratricopeptide repeat domain 38 [Source:ZFIN;Acc:ZDB-GENE-050522-318]
5. ano5a ENSDARG00000015731 601 1.798 0.828 - - - - - - - 0.970 anoctamin 5a [Source:ZFIN;Acc:ZDB-GENE-091013-2]
6. enpp6 ENSDARG00000040469 187 1.776 - - - - - - 0.778 - 0.998 ectonucleotide pyrophosphatase/phosphodiesterase 6 [Source:ZFIN;Acc:ZDB-GENE-031205-1]
7. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 1.752 - 0.791 - - - - - - 0.961 ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
8. zgc:113363 ENSDARG00000101206 474 1.734 - 0.777 - - - - - - 0.957 zgc:113363 [Source:ZFIN;Acc:ZDB-GENE-050327-7]
9. arl6 ENSDARG00000032056, ENSDARG00000113281 238 1.722 - - - - - - 0.729 - 0.993 ADP-ribosylation factor-like 6 [Source:ZFIN;Acc:ZDB-GENE-041219-2]
10. gpr1 ENSDARG00000101366 733 1.722 - 0.734 - - - - - - 0.988 G protein-coupled receptor 1 [Source:ZFIN;Acc:ZDB-GENE-091204-457]
11. dnajc12 ENSDARG00000086691 260 1.711 - - - - - - 0.722 - 0.989 DnaJ (Hsp40) homolog, subfamily C, member 12 [Source:ZFIN;Acc:ZDB-GENE-070801-3]
12. zgc:153151 ENSDARG00000069563 126 1.71 - - - - - 0.720 - - 0.990 zgc:153151 [Source:ZFIN;Acc:ZDB-GENE-060825-103]
13. prkcbb ENSDARG00000022254 319 1.702 - - - - - 0.720 - - 0.982 protein kinase C, beta b [Source:ZFIN;Acc:ZDB-GENE-040426-1178]
14. DHX29 ENSDARG00000040326 431 1.688 - - - - - 0.814 0.874 - - DEAH (Asp-Glu-Ala-His) box polypeptide 29 [Source:ZFIN;Acc:ZDB-GENE-130530-606]
15. isoc2 ENSDARG00000013371 1378 1.686 - 0.825 - - - - - - 0.861 isochorismatase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070518-1]
16. sema3aa ENSDARG00000019235, ENSDARG00000116240 1745 1.675 - 0.712 - - - - - - 0.963 sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Aa [Source:ZFIN;Acc:ZDB-GENE-991209-3]
17. traf6 ENSDARG00000028058 478 1.67 - - - 0.791 - - - - 0.879 TNF receptor-associated factor 6 [Source:ZFIN;Acc:ZDB-GENE-030131-5735]
18. gpt2 ENSDARG00000012199 1415 1.666 - 0.841 - - - - - - 0.825 glutamic pyruvate transaminase (alanine aminotransferase) 2 [Source:ZFIN;Acc:ZDB-GENE-030729-8]
19. polr3a ENSDARG00000102569 1072 1.666 - 0.710 - - - - - - 0.956 polymerase (RNA) III (DNA directed) polypeptide A [Source:ZFIN;Acc:ZDB-GENE-050208-103]
20. tmem242 ENSDARG00000037070 1081 1.637 - 0.898 - - - - 0.739 - - transmembrane protein 242 [Source:ZFIN;Acc:ZDB-GENE-040724-146]
21. zfr2 ENSDARG00000071683 780 1.613 - - - - - - 0.724 - 0.889 zinc finger RNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-070705-184]
22. mirlet7i 192 1.609 - - - 0.864 - - 0.745 - - microRNA let-7i
23. xrcc5_1 ENSDARG00000099298 1533 1.603 - - - - - 0.772 - - 0.831 X-ray repair complementing defective repair in Chinese hamster cells 5 [Source:ZFIN;Acc:ZDB-GENE-041008-108]
24. trap1 ENSDARG00000024317, ENSDARG00000114173 2189 1.599 - 0.880 - - - - 0.719 - - TNF receptor-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4257]
25. CASKIN2_1 CASKIN2_1 2299 1.591 - 0.773 - - - - - - 0.818
26. C3H17orf53 C3H17orf53 191 1.583 - - - 0.756 - 0.827 - - -
27. VGLL3 ENSDARG00000038305 242 1.577 0.799 0.778 - - - - - - - vestigial-like family member 3 [Source:ZFIN;Acc:ZDB-GENE-130530-600]
28. mms22l ENSDARG00000074691 232 1.575 - - - 0.766 - - 0.809 - - MMS22-like, DNA repair protein [Source:ZFIN;Acc:ZDB-GENE-030131-3869]
29. mrpl44 ENSDARG00000094277 1778 1.566 - 0.784 - - - - 0.782 - - mitochondrial ribosomal protein L44 [Source:ZFIN;Acc:ZDB-GENE-050913-59]
30. herc2 ENSDARG00000073841 486 1.555 0.756 0.799 - - - - - - - HECT and RLD domain containing E3 ubiquitin protein ligase 2 [Source:ZFIN;Acc:ZDB-GENE-070718-6]
31. sugp1 ENSDARG00000075936 826 1.554 - 0.741 - 0.813 - - - - - SURP and G patch domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-070615-33]
32. nvl ENSDARG00000025605 497 1.554 - - - - - 0.735 0.819 - - nuclear VCP-like [Source:ZFIN;Acc:ZDB-GENE-040426-2871]
33. PTP4A3 ENSDARG00000039997 3814 1.548 0.712 0.836 - - - - - - - protein tyrosine phosphatase type IVA, member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2220]
34. C19H6orf136 C19H6orf136 1387 1.545 - 0.748 - - - - 0.797 - -
35. kcnh6 kcnh6 59 1.539 - - - 0.756 - 0.783 - - -
36. gpd1l ENSDARG00000040024 2182 1.533 - 0.755 - - - 0.778 - - - glycerol-3-phosphate dehydrogenase 1 like [Source:ZFIN;Acc:ZDB-GENE-041010-220]
37. lipt1 ENSDARG00000025233 385 1.53 - - - 0.729 - 0.801 - - - lipoyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-060929-112]
38. rpf2 ENSDARG00000043960 2719 1.529 - 0.736 - - - - 0.793 - - ribosome production factor 2 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2501]
39. CABZ01039301.1 CABZ01039301.1 189 1.528 - - - 0.752 - 0.776 - - -
40. timm8a ENSDARG00000023672, ENSDARG00000114203 1075 1.521 - 0.739 - - - - 0.782 - - translocase of inner mitochondrial membrane 8 homolog A (yeast) [Source:ZFIN;Acc:ZDB-GENE-040801-158]
41. mef2cb ENSDARG00000009418 1124 1.517 0.746 0.771 - - - - - - - myocyte enhancer factor 2cb [Source:ZFIN;Acc:ZDB-GENE-040901-7]
42. tmem161b ENSDARG00000055989 680 1.505 - - - 0.749 - - 0.756 - - transmembrane protein 161B [Source:ZFIN;Acc:ZDB-GENE-040426-2693]
43. CCDC137 ENSDARG00000104024, ENSDARG00000110733 1855 1.504 - 0.801 - - - 0.703 - - - coiled-coil domain containing 137 [Source:ZFIN;Acc:ZDB-GENE-060929-1206]
44. tbl3 ENSDARG00000052344 1530 1.502 - 0.791 - - - 0.711 - - - transducin (beta)-like 3 [Source:ZFIN;Acc:ZDB-GENE-041114-104]
45. si:dkey-96h14.3 si:dkey-96h14.3 355 1.491 - - - 0.741 - - 0.750 - -
46. gal3st1 gal3st1 108 1.471 - - - 0.756 - - 0.715 - -
47. asb5b ENSDARG00000053222 1207 1.47 0.730 0.740 - - - - - - - ankyrin repeat and SOCS box containing 5b [Source:ZFIN;Acc:ZDB-GENE-050417-271]
48. PLEKHH3 ENSDARG00000070174 2117 1.468 - - - - - 0.734 - - 0.734 pleckstrin homology, MyTH4 and FERM domain containing H3 [Source:HGNC Symbol;Acc:HGNC:26105]
49. ssna1 ENSDARG00000101300 403 1.46 - - - 0.714 - - 0.746 - - Sjogren syndrome nuclear autoantigen 1 [Source:ZFIN;Acc:ZDB-GENE-081104-255]
50. si:ch211-132g1.3 ENSDARG00000089477 769 1.446 0.725 - - - - 0.721 - - - si:ch211-132g1.3 [Source:ZFIN;Acc:ZDB-GENE-090312-148]
51. limk1b ENSDARG00000003022 172 1.439 - 0.705 - 0.734 - - - - - LIM domain kinase 1b [Source:ZFIN;Acc:ZDB-GENE-110411-106]
52. orai1b ENSDARG00000004154, ENSDARG00000111828 364 1.438 - 0.729 - 0.709 - - - - - ORAI calcium release-activated calcium modulator 1b [Source:ZFIN;Acc:ZDB-GENE-050522-100]
53. tjp1a ENSDARG00000077506 2658 1.436 - - - - - - 0.703 - 0.733 tight junction protein 1a [Source:ZFIN;Acc:ZDB-GENE-031001-2]
54. si:dkey-66i24.9 ENSDARG00000096689 796 1.431 - - - - - 0.710 0.721 - - si:dkey-66i24.9 [Source:ZFIN;Acc:ZDB-GENE-130531-63]
55. kcnf1a ENSDARG00000027940 155 1.427 - 0.701 - 0.726 - - - - - potassium voltage-gated channel, subfamily F, member 1a [Source:ZFIN;Acc:ZDB-GENE-041001-217]
56. dmtf1 ENSDARG00000025824, ENSDARG00000109819, ENSDARG00000110011 364 1.426 - 0.705 - 0.721 - - - - - cyclin D binding myb-like transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-040718-413]
57. mef2d ENSDARG00000040237 6144 1.425 0.700 0.725 - - - - - - - myocyte enhancer factor 2d [Source:ZFIN;Acc:ZDB-GENE-990415-164]
58. pxk ENSDARG00000063195 851 1.42 - 0.701 - - - - 0.719 - - PX domain containing serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-050208-393]
59. AKR1C1 AKR1C1 32 1.413 - - - - - 0.704 0.709 - -
60. CABZ01063402.1 CABZ01063402.1 64 0.998 - - - - - - - - 0.998
61. CT030712.1 ENSDARG00000044355 83 0.998 - - - - - - - - 0.998 uncharacterized LOC100534830 [Source:NCBI gene;Acc:100534830]
62. myo18ab ENSDARG00000061862 124 0.998 - - - - - - - - 0.998 myosin XVIIIAb [Source:ZFIN;Acc:ZDB-GENE-080423-1]
63. ERAP1_1 ERAP1_1 64 0.998 - - - - - - - - 0.998
64. si:ch211-89o5.1 si:ch211-89o5.1 91 0.998 - - - - - - - - 0.998
65. si:dkey-246e3.4 ENSDARG00000086390 50 0.998 - - - - - - - - 0.998 si:dkey-246e3.4 [Source:ZFIN;Acc:ZDB-GENE-130531-58]
66. FAM83H FAM83H 190 0.997 - - - - - - - - 0.997
67. CR388047.3 ENSDARG00000117023 89 0.997 - - - - - - - - 0.997
68. ACBD3 ENSDARG00000042623 159 0.997 - - - - - - - - 0.997 acyl-Coenzyme A binding domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1930]
69. rnf165a ENSDARG00000077906 133 0.995 - - - - - - - - 0.995 ring finger protein 165a [Source:ZFIN;Acc:ZDB-GENE-091118-64]
70. casp2 ENSDARG00000062052 559 0.995 - - - - - - - - 0.995 caspase 2, apoptosis-related cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-030825-3]
71. calhm2 ENSDARG00000039482 138 0.994 - - - - - - - - 0.994 calcium homeostasis modulator 2 [Source:ZFIN;Acc:ZDB-GENE-030616-561]
72. MIER3 MIER3 114 0.994 - - - - - - - - 0.994
73. tp53i11b ENSDARG00000006025 569 0.993 - - - - - - - - 0.993 tumor protein p53 inducible protein 11b [Source:ZFIN;Acc:ZDB-GENE-030131-6328]
74. eve1 ENSDARG00000056012 144 0.993 - - - - - - - - 0.993 even-skipped-like1 [Source:ZFIN;Acc:ZDB-GENE-980526-69]
75. prmt10 prmt10 312 0.993 - - - - - - - - 0.993
76. trim33l ENSDARG00000086126 241 0.993 - - - - - - - - 0.993 tripartite motif containing 33, like [Source:ZFIN;Acc:ZDB-GENE-030131-5695]
77. lrp1bb ENSDARG00000061517 172 0.992 - - - - - - - - 0.992 low density lipoprotein receptor-related protein 1Bb [Source:ZFIN;Acc:ZDB-GENE-070912-401]
78. TPMT TPMT 138 0.992 - - - - - - - - 0.992
79. si:ch211-195h23.3 ENSDARG00000068431 322 0.992 - - - - - - - - 0.992 si:ch211-195h23.3 [Source:ZFIN;Acc:ZDB-GENE-070912-174]
80. asb13b ENSDARG00000089833 251 0.991 - - - - - - - - 0.991 ankyrin repeat and SOCS box containing 13b [Source:ZFIN;Acc:ZDB-GENE-091118-116]
81. cd36 ENSDARG00000032639 288 0.991 - - - - - - - - 0.991 CD36 molecule (thrombospondin receptor) [Source:ZFIN;Acc:ZDB-GENE-040718-55]
82. cadpsa ENSDARG00000043661 160 0.99 - - - - - - - - 0.990 Ca2+-dependent activator protein for secretion a [Source:ZFIN;Acc:ZDB-GENE-030616-525]
83. MAP1S MAP1S 123 0.989 - - - - - - - - 0.989
84. si:ch211-232i5.1 ENSDARG00000078072 1337 0.989 - - - - - - - - 0.989 si:ch211-232i5.1 [Source:ZFIN;Acc:ZDB-GENE-070705-127]
85. FP236810.2 ENSDARG00000113218 140 0.988 - - - - - - - - 0.988 UDP-glucuronosyltransferase 2B20-like [Source:NCBI gene;Acc:571561]
86. TIMP4 TIMP4 599 0.988 - - - - - - - - 0.988
87. nxnl2 ENSDARG00000003934 386 0.987 - - - - - - - - 0.987 nucleoredoxin like 2 [Source:ZFIN;Acc:ZDB-GENE-041212-55]
88. nfu1 ENSDARG00000068125 1743 0.987 - - - - - - - - 0.987 NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050417-365]
89. pglyrp5 ENSDARG00000068382, ENSDARG00000112609 120 0.987 - - - - - - - - 0.987 peptidoglycan recognition protein 5 [Source:ZFIN;Acc:ZDB-GENE-050419-71]
90. si:ch211-129c21.1 ENSDARG00000024775 371 0.987 - - - - - - - - 0.987 si:ch211-129c21.1 [Source:ZFIN;Acc:ZDB-GENE-030131-5796]
91. ecd ENSDARG00000022944, ENSDARG00000114710 273 0.987 - - - - - - - - 0.987 ecdysoneless homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-6304]
92. KIF2A_1 ENSDARG00000043571 189 0.987 - - - - - - - - 0.987 kinesin family member 2A [Source:HGNC Symbol;Acc:HGNC:6318]
93. gba2 ENSDARG00000061472 171 0.986 - - - - - - - - 0.986 glucosidase, beta (bile acid) 2 [Source:ZFIN;Acc:ZDB-GENE-070522-3]
94. C20H1orf131 C20H1orf131 406 0.986 - - - - - - - - 0.986
95. si:ch73-138e16.8 175 0.986 - - - - - - - - 0.986 si:ch73-138e16.8
96. cog2 ENSDARG00000004037 462 0.985 - - - - - - - - 0.985 component of oligomeric golgi complex 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2671]
97. CR954145.1 CR954145.1 327 0.985 - - - - - - - - 0.985
98. GRAMD2 GRAMD2 300 0.985 - - - - - - - - 0.985
99. zgc:112263 zgc:112263 473 0.985 - - - - - - - - 0.985
100. glsb ENSDARG00000040705 1439 0.985 - - - - - - - - 0.985 glutaminase b [Source:ZFIN;Acc:ZDB-GENE-030616-550]

There are 1517 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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