Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for pelo

Gene Name Gene ID Reads Annotation
pelo ENSDARG00000055477 1927 pelota mRNA surveillance and ribosome rescue factor [Source:ZFIN;Acc:ZDB-GENE-040426-1074]










Genes with expression patterns similar to pelo

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pelo ENSDARG00000055477 1927 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 pelota mRNA surveillance and ribosome rescue factor [Source:ZFIN;Acc:ZDB-GENE-040426-1074]
2. MRPL52 ENSDARG00000090568 4402 3.155 - 0.806 0.793 - - - 0.766 0.790 - mitochondrial ribosomal protein L52 [Source:ZFIN;Acc:ZDB-GENE-110325-1]
3. esd ENSDARG00000019496 3192 2.956 - 0.739 0.772 - - - 0.720 - 0.725 esterase D/formylglutathione hydrolase [Source:ZFIN;Acc:ZDB-GENE-050417-328]
4. cog2 ENSDARG00000004037 462 2.574 - - 0.939 - - - 0.737 - 0.898 component of oligomeric golgi complex 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2671]
5. zgc:66479 ENSDARG00000008732 3347 2.545 0.920 0.750 - - - - 0.875 - - zgc:66479 [Source:ZFIN;Acc:ZDB-GENE-031030-10]
6. slc25a39 ENSDARG00000007449 630 2.541 - 0.735 - - - - - 0.892 0.914 solute carrier family 25, member 39 [Source:ZFIN;Acc:ZDB-GENE-040426-1250]
7. eif1axa ENSDARG00000029003, ENSDARG00000114914 3973 2.536 - - 0.742 - - - - 0.904 0.890 eukaryotic translation initiation factor 1A X-linked a [Source:ZFIN;Acc:ZDB-GENE-041010-185]
8. PRRG1 ENSDARG00000043283 2779 2.39 - - - 0.810 - - 0.704 0.876 - proline rich Gla (G-carboxyglutamic acid) 1 [Source:ZFIN;Acc:ZDB-GENE-041010-20]
9. stxbp3 ENSDARG00000008142 2604 2.39 - - - - - - 0.734 0.749 0.907 syntaxin binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2833]
10. ssbp1 ENSDARG00000039350 809 2.371 - 0.712 - - - - 0.776 0.883 - single-stranded DNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050417-340]
11. utp3 ENSDARG00000056720 922 2.333 - 0.755 - 0.708 - - - 0.870 - UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040912-163]
12. tlk1a ENSDARG00000042467 2339 2.272 - 0.760 - - - - 0.767 0.745 - tousled-like kinase 1a [Source:ZFIN;Acc:ZDB-GENE-071008-2]
13. actr1 ENSDARG00000011611 3879 2.242 - 0.805 0.714 - - - - 0.723 - ARP1 actin related protein 1, centractin [Source:ZFIN;Acc:ZDB-GENE-040426-2695]
14. CR942805.1 CR942805.1 94 1.914 - - 0.960 - - - - 0.954 -
15. CABZ01073174.1 CABZ01073174.1 581 1.908 - - 0.959 - - - - 0.949 -
16. lrrc40 ENSDARG00000017708 1156 1.888 0.988 - - - - - - 0.900 - leucine rich repeat containing 40 [Source:ZFIN;Acc:ZDB-GENE-030131-6062]
17. TOM1L2 ENSDARG00000056394 793 1.854 0.957 - - - - - - 0.897 - target of myb1 like 2 membrane trafficking protein [Source:HGNC Symbol;Acc:HGNC:11984]
18. ddx27 ENSDARG00000091831 1471 1.846 - - - - - - - 0.943 0.903 DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Source:ZFIN;Acc:ZDB-GENE-031001-8]
19. lama5 ENSDARG00000058543 2782 1.846 0.927 - 0.919 - - - - - - laminin, alpha 5 [Source:ZFIN;Acc:ZDB-GENE-030131-9823]
20. ppp1r3ca ENSDARG00000071005, ENSDARG00000111817, ENSDARG00000112962 2641 1.841 0.928 - 0.913 - - - - - - protein phosphatase 1, regulatory subunit 3Ca [Source:ZFIN;Acc:ZDB-GENE-040718-70]
21. CCDC167 ENSDARG00000045850 1024 1.833 - - 0.930 - - - - - 0.903 coiled-coil domain containing 167 [Source:ZFIN;Acc:ZDB-GENE-041210-79]
22. pon1 ENSDARG00000032496 1375 1.823 0.951 - - - - - - - 0.872 paraoxonase 1 [Source:ZFIN;Acc:ZDB-GENE-040912-6]
23. tead3a ENSDARG00000074321 2240 1.812 0.950 - 0.862 - - - - - - TEA domain family member 3 a [Source:ZFIN;Acc:ZDB-GENE-031112-10]
24. gpt2l ENSDARG00000019541 3397 1.811 0.935 - - - - - - - 0.876 glutamic pyruvate transaminase (alanine aminotransferase) 2, like [Source:ZFIN;Acc:ZDB-GENE-050302-11]
25. zgc:136439 ENSDARG00000009267 720 1.808 - - 0.929 - - - - 0.879 - zgc:136439 [Source:ZFIN;Acc:ZDB-GENE-060421-2858]
26. stk17b ENSDARG00000014348, ENSDARG00000114208 1447 1.805 - - - - - - - 0.884 0.921 serine/threonine kinase 17b (apoptosis-inducing) [Source:ZFIN;Acc:ZDB-GENE-040426-1499]
27. tradd ENSDARG00000036057, ENSDARG00000117083 1583 1.798 - - - - - - - 0.897 0.901 tnfrsf1a-associated via death domain [Source:ZFIN;Acc:ZDB-GENE-000511-5]
28. lmo4b ENSDARG00000054749, ENSDARG00000115402 1397 1.797 0.957 - - - - - - 0.840 - LIM domain only 4b [Source:ZFIN;Acc:ZDB-GENE-030131-3570]
29. Mar-02 Mar-02 1812 1.794 - - 0.884 - - - - - 0.910
30. ap1s1 ENSDARG00000056803 3854 1.793 - - 0.929 - - - - 0.864 - adaptor related protein complex 1 subunit sigma 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1119]
31. enpp4 ENSDARG00000006877, ENSDARG00000110396 994 1.786 - - 0.896 - - - - - 0.890 ectonucleotide pyrophosphatase/phosphodiesterase 4 [Source:ZFIN;Acc:ZDB-GENE-050417-444]
32. MYADML2 ENSDARG00000053953 810 1.784 0.960 - - - - - - - 0.824 myeloid-associated differentiation marker-like 2 [Source:ZFIN;Acc:ZDB-GENE-120807-3]
33. zeb1b ENSDARG00000013207, ENSDARG00000113922 2571 1.781 - - 0.938 - - - 0.843 - - zinc finger E-box binding homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-010621-1]
34. b3gnt2b ENSDARG00000091902 4125 1.779 0.840 - 0.939 - - - - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2b [Source:ZFIN;Acc:ZDB-GENE-050913-158]
35. pank4 ENSDARG00000098453, ENSDARG00000114951 662 1.777 - - - - - - - 0.884 0.893 pantothenate kinase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1592]
36. vat1 ENSDARG00000056481, ENSDARG00000111382 7389 1.769 0.937 0.832 - - - - - - - vesicle amine transport 1 [Source:ZFIN;Acc:ZDB-GENE-030616-178]
37. trappc6bl ENSDARG00000033171, ENSDARG00000111544 911 1.769 - - 0.921 - - - - 0.848 - trafficking protein particle complex 6b-like [Source:ZFIN;Acc:ZDB-GENE-040426-1602]
38. IWS1 2428 1.767 - - 0.893 - - - - 0.874 - IWS1, SUPT6H interacting protein, transcript variant X2
39. pcmtd1 ENSDARG00000053152 564 1.766 - - - - - 0.863 - 0.903 - protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5387]
40. fat3a ENSDARG00000033840 902 1.765 - - 0.928 - - - - 0.837 - FAT atypical cadherin 3a [Source:ZFIN;Acc:ZDB-GENE-060929-1254]
41. PVRL4 1691 1.763 - - 0.887 - - - - 0.876 - poliovirus receptor-related 4
42. CABZ01032467.1 CABZ01032467.1 400 1.761 - - - 0.853 - - - - 0.908
43. ccdc3 ccdc3 559 1.756 - - - - - - - 0.904 0.852
44. scarb1 ENSDARG00000101557 503 1.753 0.953 - - 0.800 - - - - - scavenger receptor class B, member 1 [Source:ZFIN;Acc:ZDB-GENE-031126-1]
45. cul5a ENSDARG00000069742, ENSDARG00000112542, ENSDARG00000116292 955 1.753 - - 0.909 - - - - 0.844 - cullin 5a [Source:ZFIN;Acc:ZDB-GENE-030131-5426]
46. plcg1 ENSDARG00000038442 5324 1.751 - - 0.911 - - - - 0.840 - phospholipase C, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-030421-3]
47. foxj1a ENSDARG00000101919 1095 1.75 - - 0.881 - - - - 0.869 - forkhead box J1a [Source:ZFIN;Acc:ZDB-GENE-060929-1178]
48. aurkaip1 ENSDARG00000074985 2214 1.748 0.941 - 0.807 - - - - - - aurora kinase A interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-070928-24]
49. mrps25 ENSDARG00000041306 3654 1.748 - - 0.856 - - - - - 0.892 mitochondrial ribosomal protein S25 [Source:ZFIN;Acc:ZDB-GENE-050417-52]
50. fbxw8 ENSDARG00000079089 571 1.745 - - 0.932 0.813 - - - - - F-box and WD repeat domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-080204-111]
51. smx5 ENSDARG00000070867, ENSDARG00000111500, ENSDARG00000113078, ENSDARG00000113975 3132 1.742 0.948 - - 0.794 - - - - - smx5 [Source:ZFIN;Acc:ZDB-GENE-000616-10]
52. epn2 ENSDARG00000008377 5458 1.74 0.937 - - - - - - - 0.803 epsin 2 [Source:ZFIN;Acc:ZDB-GENE-071212-1]
53. sult6b1 ENSDARG00000086826 2070 1.736 0.946 - - - - - - - 0.790 sulfotransferase family, cytosolic, 6b, member 1 [Source:ZFIN;Acc:ZDB-GENE-050417-228]
54. spry4 ENSDARG00000068732 2091 1.735 0.947 - - - - - - - 0.788 sprouty homolog 4 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-010803-2]
55. ano5a ENSDARG00000015731 601 1.734 - - - - - - 0.851 - 0.883 anoctamin 5a [Source:ZFIN;Acc:ZDB-GENE-091013-2]
56. zgc:55733 ENSDARG00000103845 1550 1.73 0.947 - - - - - - 0.783 - zgc:55733 [Source:ZFIN;Acc:ZDB-GENE-040426-791]
57. xrcc5_1 ENSDARG00000099298 1533 1.725 - - - - - - - 0.871 0.854 X-ray repair complementing defective repair in Chinese hamster cells 5 [Source:ZFIN;Acc:ZDB-GENE-041008-108]
58. CLDN23 CLDN23 2002 1.725 0.885 - 0.840 - - - - - -
59. klf15 ENSDARG00000091127 1037 1.725 - - 0.914 - - - - - 0.811 Kruppel-like factor 15 [Source:ZFIN;Acc:ZDB-GENE-030131-7844]
60. BX927349.2 BX927349.2 325 1.72 - - - 0.793 - - - 0.927 -
61. mrps24 ENSDARG00000100116 1750 1.72 0.951 0.769 - - - - - - - mitochondrial ribosomal protein S24 [Source:ZFIN;Acc:ZDB-GENE-050522-393]
62. gas2l3 ENSDARG00000045880 614 1.717 - - - - - - - 0.836 0.881 growth arrest-specific 2 like 3 [Source:ZFIN;Acc:ZDB-GENE-030131-2560]
63. pfkfb3 ENSDARG00000001953 656 1.714 0.960 - - 0.754 - - - - - 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2724]
64. mtfr2 ENSDARG00000060394 482 1.711 - - - 0.765 - - - 0.946 - mitochondrial fission regulator 2 [Source:ZFIN;Acc:ZDB-GENE-061013-398]
65. mov10b.1 ENSDARG00000061177 370 1.71 - - - - - - 0.813 - 0.897 Moloney leukemia virus 10b, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9089]
66. SEC16A 1707 1.71 - - 0.875 - - - - - 0.835 SEC16 homolog A, endoplasmic reticulum export factor, transcript variant X3
67. TBC1D13 815 1.705 - - 0.913 - - - 0.792 - - TBC1 domain family, member 13
68. Mar-07 Mar-07 2926 1.701 - 0.795 - - - - - 0.906 -
69. GIT1 ENSDARG00000039489 1157 1.699 0.952 - - - - - - 0.747 - G protein-coupled receptor kinase interacting ArfGAP 1 [Source:ZFIN;Acc:ZDB-GENE-100408-5]
70. si:dkey-12e7.1 ENSDARG00000069328, ENSDARG00000109272 239 1.695 - - - - - 0.762 - 0.933 - si:dkey-12e7.1 [Source:ZFIN;Acc:ZDB-GENE-050419-173]
71. DENND1A ENSDARG00000014592 436 1.695 - - - 0.777 - - - 0.918 - DENN/MADD domain containing 1A [Source:ZFIN;Acc:ZDB-GENE-060404-6]
72. PPP1R8 PPP1R8 1897 1.695 - - 0.901 - - - - 0.794 -
73. efna1a ENSDARG00000030326 1692 1.693 0.906 0.787 - - - - - - - ephrin-A1a [Source:ZFIN;Acc:ZDB-GENE-040426-1135]
74. bub1bb ENSDARG00000074927 1667 1.692 - - 0.859 - - - - 0.833 - BUB1 mitotic checkpoint serine/threonine kinase Bb [Source:ZFIN;Acc:ZDB-GENE-030829-51]
75. fzd2 ENSDARG00000054438 585 1.688 - - 0.937 0.751 - - - - - frizzled class receptor 2 [Source:ZFIN;Acc:ZDB-GENE-990415-224]
76. CR388231.3 ENSDARG00000105601 2404 1.686 - - 0.800 - - - - 0.886 -
77. si:ch211-214j24.10 ENSDARG00000045847 5145 1.684 0.791 - - - - - - - 0.893 si:ch211-214j24.10 [Source:ZFIN;Acc:ZDB-GENE-030131-6301]
78. stk24b ENSDARG00000023878 1054 1.683 - - 0.906 0.777 - - - - - serine/threonine kinase 24b (STE20 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-2841]
79. sdf2l1 ENSDARG00000035631 615 1.682 - 0.756 0.926 - - - - - - stromal cell-derived factor 2-like 1 [Source:ZFIN;Acc:ZDB-GENE-040808-46]
80. C25H12orf4 C25H12orf4 317 1.681 - - - 0.755 - - - - 0.926
81. ZNF628 1104 1.679 - - - - - - 0.748 0.931 - zinc finger protein 628, transcript variant X3
82. lmo4a ENSDARG00000013853, ENSDARG00000111873, ENSDARG00000113473 2584 1.677 - - 0.855 - - - - - 0.822 LIM domain only 4a [Source:ZFIN;Acc:ZDB-GENE-010702-1]
83. ehmt1b ENSDARG00000026634, ENSDARG00000116921 1261 1.677 - - 0.913 - - - 0.764 - - euchromatic histone-lysine N-methyltransferase 1b [Source:ZFIN;Acc:ZDB-GENE-080515-3]
84. psme4b ENSDARG00000018742, ENSDARG00000112854, ENSDARG00000114902 2916 1.675 - - 0.896 - - - - 0.779 - proteasome activator subunit 4b [Source:ZFIN;Acc:ZDB-GENE-100316-4]
85. zfr2 ENSDARG00000071683 780 1.674 - - - 0.867 - - - - 0.807 zinc finger RNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-070705-184]
86. mmp14a ENSDARG00000002235 911 1.674 - - 0.923 0.751 - - - - - matrix metallopeptidase 14a (membrane-inserted) [Source:ZFIN;Acc:ZDB-GENE-030901-1]
87. cox14 ENSDARG00000092124 2229 1.672 0.937 - - - - - 0.735 - - cytochrome c oxidase assembly factor COX14 [Source:ZFIN;Acc:ZDB-GENE-060503-626]
88. ralgps2 ENSDARG00000026519 1610 1.671 - - 0.815 - - - - - 0.856 Ral GEF with PH domain and SH3 binding motif 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1212]
89. TRIM14_6 TRIM14_6 342 1.669 - 0.713 0.956 - - - - - -
90. tmem214 ENSDARG00000016968 3772 1.669 - - 0.879 - - - - - 0.790 transmembrane protein 214 [Source:ZFIN;Acc:ZDB-GENE-110307-2]
91. chmp2bb ENSDARG00000002190 4629 1.668 0.937 - - - - - - - 0.731 charged multivesicular body protein 2Bb [Source:ZFIN;Acc:ZDB-GENE-040426-2539]
92. yrk ENSDARG00000004378 618 1.668 - 0.813 - - - - - - 0.855 Yes-related kinase [Source:ZFIN;Acc:ZDB-GENE-030131-9517]
93. tars ENSDARG00000013250, ENSDARG00000110996, ENSDARG00000113759 4599 1.663 0.905 - - - - - - - 0.758 threonyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-041010-218]
94. fbxo30a ENSDARG00000058561 867 1.663 - 0.729 0.934 - - - - - - F-box protein 30a [Source:ZFIN;Acc:ZDB-GENE-040426-1215]
95. tbc1d5 ENSDARG00000036212 2580 1.661 - - 0.892 - - - - - 0.769 TBC1 domain family, member 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1197]
96. nat9 ENSDARG00000071425, ENSDARG00000111763 1462 1.659 - 0.715 - - - - - 0.944 - N-acetyltransferase 9 (GCN5-related, putative) [Source:ZFIN;Acc:ZDB-GENE-030131-5097]
97. gclm ENSDARG00000018953 1712 1.658 0.945 - - - - - - 0.713 - glutamate-cysteine ligase, modifier subunit [Source:ZFIN;Acc:ZDB-GENE-030131-5906]
98. rapgef1a ENSDARG00000043593 416 1.658 - - 0.955 0.703 - - - - - Rap guanine nucleotide exchange factor (GEF) 1a [Source:ZFIN;Acc:ZDB-GENE-081105-26]
99. otud5b ENSDARG00000056840, ENSDARG00000114052 2199 1.658 - - 0.903 - - - - - 0.755 OTU deubiquitinase 5b [Source:ZFIN;Acc:ZDB-GENE-040801-50]
100. usp4 ENSDARG00000014770 1684 1.657 0.952 - - - - - 0.705 - - ubiquitin specific peptidase 4 (proto-oncogene) [Source:ZFIN;Acc:ZDB-GENE-041008-187]

There are 2292 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA