Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for pef1

Gene Name Gene ID Reads Annotation
pef1 ENSDARG00000023989 3013 penta-EF-hand domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040801-259]










Genes with expression patterns similar to pef1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pef1 ENSDARG00000023989 3013 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 penta-EF-hand domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040801-259]
2. rac2 ENSDARG00000038010 5837 2.478 - - - - - 0.907 0.862 - 0.709 Rac family small GTPase 2 [Source:ZFIN;Acc:ZDB-GENE-040625-27]
3. tmem18 ENSDARG00000036704 1784 2.453 - 0.793 - - - 0.941 0.719 - - transmembrane protein 18 [Source:ZFIN;Acc:ZDB-GENE-040927-26]
4. CABZ01008011.1 CABZ01008011.1 761 2.39 - 0.738 - - - 0.934 - - 0.718
5. HOOK3 ENSDARG00000114329 1980 2.342 - 0.822 - - - 0.782 - - 0.738 hook microtubule tethering protein 3 [Source:HGNC Symbol;Acc:HGNC:23576]
6. ovol1 1037 2.333 - - - 0.725 - 0.813 0.795 - - ovo-like zinc finger 1, transcript variant X1
7. hat1 ENSDARG00000034916 5712 2.295 - 0.753 - - - - 0.767 - 0.775 histone acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040912-99]
8. arcn1b ENSDARG00000031214 4529 2.246 - - - 0.718 - 0.782 0.746 - - archain 1b [Source:ZFIN;Acc:ZDB-GENE-040121-7]
9. pdxdc1 ENSDARG00000101886 1958 2.241 - - - - - 0.819 0.706 - 0.716 pyridoxal-dependent decarboxylase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040912-16]
10. bcar1 ENSDARG00000056525 6563 1.841 - - - - - 0.934 0.907 - - BCAR1, Cas family scaffold protein [Source:ZFIN;Acc:ZDB-GENE-030131-2774]
11. epn2 ENSDARG00000008377 5458 1.785 - - - - - 0.949 - - 0.836 epsin 2 [Source:ZFIN;Acc:ZDB-GENE-071212-1]
12. nrm ENSDARG00000063690 1371 1.743 - - - - - 0.954 0.789 - - nurim [Source:ZFIN;Acc:ZDB-GENE-060503-445]
13. elovl6l ENSDARG00000038639 1184 1.741 - - - - - 0.910 0.831 - - ELOVL family member 6, elongation of long chain fatty acids like [Source:ZFIN;Acc:ZDB-GENE-031110-3]
14. FYCO1 FYCO1 194 1.731 - - - 0.811 - 0.920 - - -
15. cldn7b ENSDARG00000014047, ENSDARG00000114912 2960 1.723 - - - - - 0.956 0.767 - - claudin 7b [Source:ZFIN;Acc:ZDB-GENE-001103-5]
16. stk10 ENSDARG00000101894 1587 1.718 0.778 - - - - 0.940 - - - serine/threonine kinase 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1136]
17. cdc20 ENSDARG00000100741 3264 1.71 - - - - - 0.901 0.809 - - cell division cycle 20 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2044]
18. fuca1 fuca1 6176 1.705 - 0.805 - - - 0.900 - - -
19. zgc:163030 ENSDARG00000069192 2963 1.7 - 0.790 - - - 0.910 - - - zgc:163030 [Source:ZFIN;Acc:ZDB-GENE-060810-77]
20. nsfb ENSDARG00000038991, ENSDARG00000109915 1443 1.697 - - - - - 0.881 0.816 - - N-ethylmaleimide-sensitive factor b [Source:ZFIN;Acc:ZDB-GENE-050808-1]
21. magt1 ENSDARG00000058062 3903 1.697 - - - - - 0.899 0.798 - - magnesium transporter 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3667]
22. myeov2 3351 1.697 - - - - - 0.938 0.759 - - myeloma overexpressed 2
23. NEURL2 ENSDARG00000062446, ENSDARG00000110488 483 1.696 - - - 0.846 - 0.850 - - - neuralized E3 ubiquitin protein ligase 2 [Source:ZFIN;Acc:ZDB-GENE-070410-31]
24. scinla_1 ENSDARG00000102415, ENSDARG00000117110 544 1.69 - - - - - 0.916 0.774 - - scinderin like a [Source:ZFIN;Acc:ZDB-GENE-030131-2005]
25. idh1 ENSDARG00000025375, ENSDARG00000112650, ENSDARG00000117104 6100 1.689 - - - - - 0.891 0.798 - - isocitrate dehydrogenase 1 (NADP+), soluble [Source:ZFIN;Acc:ZDB-GENE-031006-1]
26. chmp5b ENSDARG00000103718 1608 1.688 - - - - - 0.856 0.832 - - charged multivesicular body protein 5b [Source:ZFIN;Acc:ZDB-GENE-040426-1374]
27. trpc4apa ENSDARG00000018840 2543 1.677 - - - 0.827 - 0.850 - - - transient receptor potential cation channel, subfamily C, member 4 associated protein a [Source:ZFIN;Acc:ZDB-GENE-000330-3]
28. C6H2orf40 C6H2orf40 4224 1.675 - 0.738 - - - 0.937 - - -
29. mgst1 mgst1 2820 1.675 - - - - - 0.943 0.732 - -
30. aldh3b1 ENSDARG00000013839 796 1.674 - 0.796 - - - - 0.878 - - aldehyde dehydrogenase 3 family, member B1 [Source:ZFIN;Acc:ZDB-GENE-021120-3]
31. PGAP3 ENSDARG00000057531, ENSDARG00000112574 2046 1.668 - - - 0.852 - 0.816 - - - post-GPI attachment to proteins 3 [Source:ZFIN;Acc:ZDB-GENE-080204-27]
32. ELMO3 ENSDARG00000042126, ENSDARG00000110625 1900 1.663 - - - - - 0.854 0.809 - - engulfment and cell motility 3 [Source:ZFIN;Acc:ZDB-GENE-050309-39]
33. mpzl2b ENSDARG00000027345, ENSDARG00000113465 575 1.662 - - - - - 0.897 0.765 - - myelin protein zero-like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-8774]
34. ppl ENSDARG00000101043 9196 1.661 - - - - - 0.925 0.736 - - periplakin [Source:ZFIN;Acc:ZDB-GENE-041008-196]
35. gnpnat1 ENSDARG00000039892 709 1.659 - 0.812 - - - 0.847 - - - glucosamine-phosphate N-acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-050522-450]
36. rybpb ENSDARG00000053459 1464 1.658 - - - 0.886 - - - - 0.772 RING1 and YY1 binding protein b [Source:ZFIN;Acc:ZDB-GENE-061103-96]
37. afap1 ENSDARG00000055284 730 1.658 - - - - - 0.950 0.708 - - actin filament associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-100316-6]
38. tefb ENSDARG00000098103 370 1.657 - - - - - 0.935 0.722 - - thyrotrophic embryonic factor b [Source:ZFIN;Acc:ZDB-GENE-050522-224]
39. cx30.3 ENSDARG00000042707, ENSDARG00000116331 2399 1.655 - - - - - 0.882 0.773 - - connexin 30.3 [Source:ZFIN;Acc:ZDB-GENE-040406-1]
40. brd4 ENSDARG00000078904 5367 1.647 - - - - - 0.811 0.836 - - bromodomain containing 4 [Source:ZFIN;Acc:ZDB-GENE-030131-267]
41. ctdsp2 ENSDARG00000036102, ENSDARG00000110420 4625 1.64 - - - - - 0.772 0.868 - - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-184]
42. GPR31 431 1.639 - - - - - 0.917 0.722 - - G protein-coupled receptor 31
43. sec11a ENSDARG00000008936, ENSDARG00000116303 6529 1.639 - 0.788 - - - - 0.851 - - SEC11 homolog A, signal peptidase complex subunit [Source:ZFIN;Acc:ZDB-GENE-040718-227]
44. RECQL4 ENSDARG00000077516 462 1.638 - - - 0.727 - 0.911 - - - RecQ helicase-like 4 [Source:ZFIN;Acc:ZDB-GENE-091112-2]
45. cmasb 499 1.637 - - - - - 0.921 0.716 - - cytidine monophosphate N-acetylneuraminic acid synthetase b
46. CABZ01057013.1 CABZ01057013.1 1308 1.635 0.701 - - - - 0.934 - - -
47. zgc:100918 ENSDARG00000087243 5451 1.634 0.759 - - - - 0.875 - - - zgc:100918 [Source:ZFIN;Acc:ZDB-GENE-040927-2]
48. U2_6 U2_6 1155 1.628 - - - - - 0.901 0.727 - -
49. tm7sf3 ENSDARG00000093658 754 1.626 - - - 0.753 - 0.873 - - - transmembrane 7 superfamily member 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1770]
50. nrg1 ENSDARG00000104314 1081 1.625 - - - - - 0.906 - - 0.719 neuregulin 1 [Source:ZFIN;Acc:ZDB-GENE-050302-113]
51. prkar1aa ENSDARG00000076128 6565 1.618 - - - - - 0.822 0.796 - - protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1) a [Source:ZFIN;Acc:ZDB-GENE-050116-2]
52. smg7 ENSDARG00000060767 2759 1.617 - - - - - 0.903 0.714 - - SMG7 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-030131-9122]
53. tmem189 ENSDARG00000042732 4004 1.617 - - - - - 0.881 - - 0.736 transmembrane protein 189 [Source:ZFIN;Acc:ZDB-GENE-041010-150]
54. zgc:153258 zgc:153258 868 1.615 0.728 - - - - 0.887 - - -
55. skia ENSDARG00000042151 1850 1.609 - - - 0.854 - - 0.755 - - v-ski avian sarcoma viral oncogene homolog a [Source:ZFIN;Acc:ZDB-GENE-990715-9]
56. si:ch211-232i5.3 ENSDARG00000086874 1256 1.608 - - - - - 0.800 0.808 - - si:ch211-232i5.3 [Source:ZFIN;Acc:ZDB-GENE-091204-88]
57. rnf145b ENSDARG00000032373 601 1.607 - - - 0.806 - 0.801 - - - ring finger protein 145b [Source:ZFIN;Acc:ZDB-GENE-030131-5264]
58. coa5 ENSDARG00000094833 1988 1.604 - - - - - 0.900 0.704 - - cytochrome C oxidase assembly factor 5 [Source:ZFIN;Acc:ZDB-GENE-060825-53]
59. brd8 ENSDARG00000025071 2605 1.596 - - - - - 0.829 - - 0.767 bromodomain containing 8 [Source:ZFIN;Acc:ZDB-GENE-030722-10]
60. stard10 ENSDARG00000097718 1041 1.596 - 0.704 - - - 0.892 - - - StAR-related lipid transfer (START) domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1797]
61. si:ch211-191j22.3 ENSDARG00000095459 959 1.59 - - - - - 0.833 0.757 - - si:ch211-191j22.3 [Source:ZFIN;Acc:ZDB-GENE-030131-4242]
62. rasgef1bb ENSDARG00000044251, ENSDARG00000117029 635 1.589 - - - - - 0.869 - - 0.720 RasGEF domain family, member 1Bb [Source:ZFIN;Acc:ZDB-GENE-040801-220]
63. man1b1 man1b1 3294 1.588 - - - - - - 0.839 - 0.749
64. fkbp2 ENSDARG00000044540 1615 1.587 - - - - - 0.805 - - 0.782 FK506 binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040912-126]
65. lpcat3 ENSDARG00000075178, ENSDARG00000109670 2713 1.585 - - - - - 0.735 0.850 - - lysophosphatidylcholine acyltransferase 3 [Source:ZFIN;Acc:ZDB-GENE-041111-232]
66. psmd8 ENSDARG00000020454 6645 1.584 - - - - - 0.780 - - 0.804 proteasome 26S subunit, non-ATPase 8 [Source:ZFIN;Acc:ZDB-GENE-040625-136]
67. sult1st4 ENSDARG00000003181 540 1.579 - - - - - 0.858 0.721 - - sulfotransferase family 1, cytosolic sulfotransferase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2054]
68. enpp4 ENSDARG00000006877, ENSDARG00000110396 994 1.574 - - - - - - 0.864 - 0.710 ectonucleotide pyrophosphatase/phosphodiesterase 4 [Source:ZFIN;Acc:ZDB-GENE-050417-444]
69. tmem258 ENSDARG00000078785 9578 1.568 - 0.724 - - - - 0.844 - - transmembrane protein 258 [Source:ZFIN;Acc:ZDB-GENE-040426-1739]
70. csde1_1 ENSDARG00000074758 2759 1.567 - - - 0.866 - 0.701 - - - cold shock domain containing E1, RNA-binding [Source:ZFIN;Acc:ZDB-GENE-030131-8623]
71. tet3 ENSDARG00000062646 6672 1.567 - - - - - 0.826 0.741 - - tet methylcytosine dioxygenase 3 [Source:ZFIN;Acc:ZDB-GENE-060526-109]
72. si:ch211-264e16.1 ENSDARG00000068947 1358 1.564 - - - - - 0.848 0.716 - - si:ch211-264e16.1 [Source:ZFIN;Acc:ZDB-GENE-060503-226]
73. pgd ENSDARG00000015343, ENSDARG00000117150 2512 1.562 - - - 0.795 - - 0.767 - - phosphogluconate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-040426-2807]
74. nufip2 ENSDARG00000069066 3965 1.562 - - - - - 0.781 0.781 - - nuclear fragile X mental retardation protein interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-041111-7]
75. slc44a2 ENSDARG00000037059 1903 1.562 - - - - - 0.814 0.748 - - solute carrier family 44 (choline transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3065]
76. tmem50a ENSDARG00000015757 3244 1.561 - - - - - 0.841 0.720 - - transmembrane protein 50A [Source:ZFIN;Acc:ZDB-GENE-040426-2937]
77. trim71 ENSDARG00000075593 2750 1.557 - - - - - - 0.821 - 0.736 tripartite motif containing 71, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-040128-1]
78. nos2b ENSDARG00000031976 935 1.556 - - - - - 0.848 0.708 - - nitric oxide synthase 2b, inducible [Source:ZFIN;Acc:ZDB-GENE-080916-1]
79. tmem127 ENSDARG00000030981 1389 1.555 - - - 0.757 - - 0.798 - - transmembrane protein 127 [Source:ZFIN;Acc:ZDB-GENE-050522-97]
80. ezrb ENSDARG00000025091 2861 1.554 - - - - - 0.787 0.767 - - ezrin b [Source:ZFIN;Acc:ZDB-GENE-050803-1]
81. mrpl10 ENSDARG00000045091, ENSDARG00000112205 1187 1.554 - - - - - 0.808 - - 0.746 mitochondrial ribosomal protein L10 [Source:ZFIN;Acc:ZDB-GENE-050320-19]
82. cmc1 ENSDARG00000103670 1197 1.553 0.709 - - 0.844 - - - - - C-x(9)-C motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2626]
83. gpx7 ENSDARG00000091511 3045 1.551 - - - 0.700 - 0.851 - - - glutathione peroxidase 7 [Source:ZFIN;Acc:ZDB-GENE-050522-419]
84. mid1ip1b ENSDARG00000019302 1589 1.549 - - - - - 0.799 - - 0.750 MID1 interacting protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1720]
85. cnn3a ENSDARG00000099510 6063 1.544 0.723 - - - - - 0.821 - - calponin 3, acidic a [Source:ZFIN;Acc:ZDB-GENE-030131-5130]
86. bhlhe40 ENSDARG00000004060 2107 1.543 - 0.703 - - - 0.840 - - - basic helix-loop-helix family, member e40 [Source:ZFIN;Acc:ZDB-GENE-030131-3133]
87. ptbp1a ENSDARG00000019362 6290 1.542 - - - - - - 0.827 - 0.715 polypyrimidine tract binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050522-492]
88. si:dkeyp-104h9.5 ENSDARG00000073801 722 1.541 - - - - - 0.757 0.784 - - si:dkeyp-104h9.5 [Source:ZFIN;Acc:ZDB-GENE-081104-449]
89. lamtor5 ENSDARG00000090194, ENSDARG00000115255 2539 1.535 - - - - - 0.834 0.701 - - late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 [Source:ZFIN;Acc:ZDB-GENE-110411-193]
90. ap1m3 ENSDARG00000039512, ENSDARG00000113914, ENSDARG00000116700 647 1.534 - - - 0.806 - - 0.728 - - adaptor related protein complex 1 subunit mu 3 [Source:ZFIN;Acc:ZDB-GENE-040801-159]
91. stt3b ENSDARG00000001890 1836 1.532 - - - - - 0.714 0.818 - - STT3B, subunit of the oligosaccharyltransferase complex (catalytic) [Source:ZFIN;Acc:ZDB-GENE-030131-2638]
92. CHST5 CHST5 1293 1.53 - - - 0.828 - 0.702 - - -
93. tradd ENSDARG00000036057, ENSDARG00000117083 1583 1.528 - - - - - - 0.816 - 0.712 tnfrsf1a-associated via death domain [Source:ZFIN;Acc:ZDB-GENE-000511-5]
94. dnaja2 ENSDARG00000104066 11946 1.527 - - - - - 0.811 - - 0.716 DnaJ (Hsp40) homolog, subfamily A, member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2884]
95. ftr83 ENSDARG00000025403, ENSDARG00000110533 1428 1.525 - - - - - 0.786 0.739 - - finTRIM family, member 83 [Source:ZFIN;Acc:ZDB-GENE-031002-11]
96. zgc:56493 ENSDARG00000031435 33407 1.522 - - - - - 0.778 0.744 - - zgc:56493 [Source:ZFIN;Acc:ZDB-GENE-030131-8581]
97. si:ch211-286b5.5 ENSDARG00000096661 3136 1.518 - - - - - - 0.795 - 0.723 si:ch211-286b5.5 [Source:ZFIN;Acc:ZDB-GENE-121214-209]
98. CU633744.1 CU633744.1 2074 1.518 - 0.731 - - - - 0.787 - -
99. CU915738.1 CU915738.1 3723 1.516 - - - - - 0.805 0.711 - -
100. stk17b ENSDARG00000014348, ENSDARG00000114208 1447 1.515 - - - - - 0.766 - - 0.749 serine/threonine kinase 17b (apoptosis-inducing) [Source:ZFIN;Acc:ZDB-GENE-040426-1499]

There are 1719 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA