Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for pdzrn4

Gene Name Gene ID Reads Annotation
pdzrn4 ENSDARG00000045687 362 PDZ domain containing ring finger 4 [Source:ZFIN;Acc:ZDB-GENE-041210-237]










Genes with expression patterns similar to pdzrn4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pdzrn4 ENSDARG00000045687 362 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 PDZ domain containing ring finger 4 [Source:ZFIN;Acc:ZDB-GENE-041210-237]
2. chat chat 463 2.675 0.858 - - - - 0.832 0.985 - -
3. CU928222.1 ENSDARG00000097436 1662 2.618 0.873 - - - - 0.793 0.952 - -
4. slc18a3a ENSDARG00000006356 1285 2.615 0.808 - - - - 0.826 0.981 - - solute carrier family 18 (vesicular acetylcholine transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-060929-990]
5. si:ch73-21g5.7 ENSDARG00000093156 9412 2.593 0.762 - - - - 0.848 0.983 - - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
6. st18 663 2.566 0.770 - - - - 0.840 0.956 - - suppression of tumorigenicity 18, zinc finger
7. onecut1 ENSDARG00000007982, ENSDARG00000112251 6307 2.561 0.796 - - - - 0.799 0.966 - - one cut homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1469]
8. prdm12b ENSDARG00000007430 914 2.557 0.757 - - - - 0.895 0.905 - - PR domain containing 12b [Source:ZFIN;Acc:ZDB-GENE-041114-172]
9. gfap ENSDARG00000025301 5584 2.55 0.729 - - - - 0.862 0.959 - - glial fibrillary acidic protein [Source:ZFIN;Acc:ZDB-GENE-990914-3]
10. nrarpb ENSDARG00000018958 6225 2.549 0.794 - - - - 0.778 0.977 - - NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
11. EML6 250 2.545 - 0.911 - - - 0.819 0.815 - - echinoderm microtubule associated protein like 6
12. hmp19 2554 2.53 0.728 - - - - 0.824 0.978 - - HMP19 protein
13. atp1b4 ENSDARG00000053262 1337 2.526 0.741 - - - - 0.848 0.937 - - ATPase Na+/K+ transporting subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-070412-1]
14. nova2 ENSDARG00000017673 7685 2.513 0.755 - - - - 0.770 0.988 - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
15. ADAMTS3 ENSDARG00000060127 2839 2.499 0.811 - - - - 0.726 0.962 - - ADAM metallopeptidase with thrombospondin type 1 motif, 3 [Source:ZFIN;Acc:ZDB-GENE-110223-1]
16. sox2 ENSDARG00000070913 2763 2.497 0.768 - - - - 0.743 0.986 - - SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
17. nes ENSDARG00000088805 2710 2.496 0.769 - - - - 0.741 0.986 - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
18. myt1b ENSDARG00000102879 5411 2.495 0.707 - - - - 0.846 0.942 - - myelin transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-090313-67]
19. vim ENSDARG00000010008 3551 2.46 0.739 - - - - 0.787 0.934 - - vimentin [Source:ZFIN;Acc:ZDB-GENE-011212-3]
20. neflb ENSDARG00000012426 298 2.459 0.783 - - - - 0.716 0.960 - - neurofilament, light polypeptide b [Source:ZFIN;Acc:ZDB-GENE-060312-44]
21. rfx4 ENSDARG00000026395, ENSDARG00000116861 2047 2.436 0.715 - - - - 0.830 0.891 - - regulatory factor X, 4 [Source:ZFIN;Acc:ZDB-GENE-040909-2]
22. zgc:113531 ENSDARG00000038794 2063 2.424 0.743 - - - - 0.790 0.891 - - zgc:113531 [Source:ZFIN;Acc:ZDB-GENE-050320-52]
23. ptpro ENSDARG00000100422, ENSDARG00000110470 1850 2.413 0.801 0.800 - - - 0.812 - - - protein tyrosine phosphatase, receptor type, O [Source:ZFIN;Acc:ZDB-GENE-070424-54]
24. SEZ6 SEZ6 262 2.412 0.759 - - - - 0.776 0.877 - -
25. syn1 ENSDARG00000060368, ENSDARG00000111164 397 2.407 - 0.818 - - - 0.708 0.881 - - synapsin I [Source:ZFIN;Acc:ZDB-GENE-081105-93]
26. pkib ENSDARG00000053110 527 2.397 0.775 - - - - 0.779 0.843 - - protein kinase (cAMP-dependent, catalytic) inhibitor beta [Source:ZFIN;Acc:ZDB-GENE-041014-312]
27. napg napg 645 2.378 0.709 - - - - 0.828 0.841 - -
28. coe2 coe2 1633 2.363 - 0.914 - - - 0.734 0.715 - -
29. hoxa5a ENSDARG00000102501 1667 2.355 0.755 - - - - 0.832 0.768 - - homeobox A5a [Source:ZFIN;Acc:ZDB-GENE-000823-9]
30. gad1b ENSDARG00000027419 440 2.353 0.718 - - - - 0.747 0.888 - - glutamate decarboxylase 1b [Source:ZFIN;Acc:ZDB-GENE-030909-3]
31. gpr144 gpr144 479 2.32 0.717 - - - - 0.725 0.878 - -
32. pcsk1 ENSDARG00000002600 404 2.31 0.764 - - - - 0.701 0.845 - - proprotein convertase subtilisin/kexin type 1 [Source:ZFIN;Acc:ZDB-GENE-071009-1]
33. CT030046.1 CT030046.1 190 2.306 - 0.783 - - - 0.754 0.769 - -
34. tmtc2 tmtc2 798 2.25 - 0.759 - - - 0.710 0.781 - -
35. CR388231.1 ENSDARG00000098710 153 2.244 - 0.810 - - - 0.705 0.729 - -
36. PRIMA1 PRIMA1 459 2.219 0.732 - - - - 0.709 0.778 - -
37. hoxa2b ENSDARG00000023031 706 2.191 0.779 - - - - - 0.705 - 0.707 homeobox A2b [Source:ZFIN;Acc:ZDB-GENE-990415-98]
38. SNAP91 ENSDARG00000098809 556 1.919 0.972 - - - - - 0.947 - - synaptosomal-associated protein 91 [Source:ZFIN;Acc:ZDB-GENE-100422-6]
39. plp1a ENSDARG00000103732 3544 1.872 - - - - - 0.885 0.987 - - proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
40. lrrn3 lrrn3 137 1.867 - - - - - 0.903 0.964 - -
41. calca ENSDARG00000056590 150 1.841 0.860 - - - - - 0.981 - - calcitonin/calcitonin-related polypeptide, alpha [Source:ZFIN;Acc:ZDB-GENE-040718-173]
42. prrt1 ENSDARG00000062208 368 1.837 - - - - - 0.903 0.934 - - proline-rich transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-060503-686]
43. mapk12b ENSDARG00000006409 2246 1.836 - - - - - 0.856 0.980 - - mitogen-activated protein kinase 12b [Source:ZFIN;Acc:ZDB-GENE-041210-123]
44. TUBA1A ENSDARG00000001889 25294 1.823 - - - - - 0.845 0.978 - - tubulin, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090507-4]
45. CU856359.2 CU856359.2 182 1.823 - - - - - 0.853 0.970 - -
46. eno2 ENSDARG00000014287 2162 1.821 - - - - - 0.829 0.992 - - enolase 2 [Source:ZFIN;Acc:ZDB-GENE-040704-27]
47. ptprna ENSDARG00000058646 1327 1.81 - - - - - 0.824 0.986 - - protein tyrosine phosphatase, receptor type, Na [Source:ZFIN;Acc:ZDB-GENE-030131-3511]
48. ADAM22 ENSDARG00000060532 2259 1.804 - - - - - 0.822 0.982 - - ADAM metallopeptidase domain 22 [Source:ZFIN;Acc:ZDB-GENE-070810-1]
49. dnajc6 ENSDARG00000079891 438 1.802 - - - - - 0.853 0.949 - - DnaJ (Hsp40) homolog, subfamily C, member 6 [Source:ZFIN;Acc:ZDB-GENE-080104-2]
50. sox19a ENSDARG00000010770, ENSDARG00000110497 4683 1.801 - - - - - 0.829 0.972 - - SRY (sex determining region Y)-box 19a [Source:ZFIN;Acc:ZDB-GENE-980526-102]
51. celsr2 ENSDARG00000019726, ENSDARG00000094388 4002 1.8 - - - - - 0.840 0.960 - - cadherin, EGF LAG seven-pass G-type receptor 2 [Source:ZFIN;Acc:ZDB-GENE-070122-2]
52. her15.2 her15.2 1701 1.8 - - - - - 0.830 0.970 - -
53. ncana 1537 1.799 - - - - - 0.867 0.932 - - neurocan a
54. gpm6aa ENSDARG00000055455, ENSDARG00000110942 9156 1.797 0.818 - - - - - 0.979 - - glycoprotein M6Aa [Source:ZFIN;Acc:ZDB-GENE-030710-7]
55. prph ENSDARG00000028306 242 1.791 - - - - - 0.869 0.922 - - peripherin [Source:ZFIN;Acc:ZDB-GENE-990415-207]
56. cldn5a ENSDARG00000043716 3865 1.79 - - - - - 0.859 0.931 - - claudin 5a [Source:ZFIN;Acc:ZDB-GENE-040426-2442]
57. rap2ip rap2ip 681 1.786 - - - - - 0.807 0.979 - -
58. DTX4 ENSDARG00000076302 2642 1.784 - - - - - 0.830 0.954 - - deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
59. camta1a ENSDARG00000077428, ENSDARG00000116922 176 1.784 - - - - - 0.831 0.953 - - calmodulin binding transcription activator 1a [Source:ZFIN;Acc:ZDB-GENE-090312-183]
60. pcdh1gc5 ENSDARG00000104826 10052 1.783 - - - - - 0.814 0.969 - - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
61. STMN3 ENSDARG00000038465 1009 1.78 - - - - - 0.826 0.954 - - stathmin-like 3 [Source:ZFIN;Acc:ZDB-GENE-081124-2]
62. lmo3 ENSDARG00000008720, ENSDARG00000114518 4773 1.778 - - - - - 0.832 0.946 - - LIM domain only 3 [Source:ZFIN;Acc:ZDB-GENE-050522-201]
63. hmgb1b ENSDARG00000030479 10398 1.776 - - - - - 0.847 0.929 - - high mobility group box 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8480]
64. st8sia2 ENSDARG00000018788 2183 1.775 - - - - - 0.815 0.960 - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-020919-4]
65. tmie ENSDARG00000069423 305 1.774 0.799 - - - - - 0.975 - - transmembrane inner ear [Source:ZFIN;Acc:ZDB-GENE-061207-9]
66. nrn1a ENSDARG00000071860 1311 1.773 - - - - - 0.784 0.989 - - neuritin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-212]
67. syt11a ENSDARG00000057913 1145 1.772 - - - - - 0.800 0.972 - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
68. notch1b ENSDARG00000052094 7874 1.77 - - - - - 0.844 0.926 - - notch 1b [Source:ZFIN;Acc:ZDB-GENE-990415-183]
69. neurog1 ENSDARG00000056130 3924 1.769 0.782 - - - - - 0.987 - - neurogenin 1 [Source:ZFIN;Acc:ZDB-GENE-990415-174]
70. atp6v0a2a ENSDARG00000035538 278 1.767 - - - - - 0.862 0.905 - - ATPase H+ transporting V0 subunit a2a [Source:ZFIN;Acc:ZDB-GENE-091113-4]
71. atp6v0cb ENSDARG00000036577 3472 1.766 - - - - - 0.797 0.969 - - ATPase H+ transporting V0 subunit cb [Source:ZFIN;Acc:ZDB-GENE-030131-4127]
72. cntnap2b ENSDARG00000074558, ENSDARG00000109616, ENSDARG00000116850 559 1.764 - - - - - 0.811 0.953 - - contactin associated protein like 2b [Source:NCBI gene;Acc:563345]
73. sypa ENSDARG00000042974, ENSDARG00000110528 3217 1.763 - - - - - 0.802 0.961 - - synaptophysin a [Source:ZFIN;Acc:ZDB-GENE-031104-2]
74. aldocb ENSDARG00000019702 2111 1.76 - - - - - 0.833 0.927 - - aldolase C, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-030821-1]
75. dla ENSDARG00000010791 9281 1.759 0.778 - - - - - 0.981 - - deltaA [Source:ZFIN;Acc:ZDB-GENE-980526-29]
76. gpr85 ENSDARG00000068701, ENSDARG00000116501 372 1.758 - - - - - 0.793 0.965 - - G protein-coupled receptor 85 [Source:ZFIN;Acc:ZDB-GENE-000710-2]
77. slc25a6 ENSDARG00000005853, ENSDARG00000113366 99 1.756 - - - - - 0.812 0.944 - - solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6 [Source:ZFIN;Acc:ZDB-GENE-070912-446]
78. rab3ab ENSDARG00000043835 1267 1.756 - - - - - 0.801 0.955 - - RAB3A, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-041210-268]
79. her13 ENSDARG00000007097 2000 1.755 0.804 - - - - - 0.951 - - hairy-related 13 [Source:ZFIN;Acc:ZDB-GENE-050228-1]
80. im:7162084 im:7162084 665 1.754 0.803 - - - - - 0.951 - -
81. gfra1b ENSDARG00000102564 821 1.753 0.922 - - - - - 0.831 - - gdnf family receptor alpha 1b [Source:ZFIN;Acc:ZDB-GENE-010226-3]
82. myt1a ENSDARG00000074030, ENSDARG00000116035 2839 1.751 - - - - - 0.802 0.949 - - myelin transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3885]
83. dpysl2b ENSDARG00000032083, ENSDARG00000109782 3487 1.75 - - - - - 0.821 0.929 - - dihydropyrimidinase-like 2b [Source:ZFIN;Acc:ZDB-GENE-031105-1]
84. CYTH2 ENSDARG00000028800 2349 1.748 - - - - - 0.852 0.896 - - cytohesin 2 [Source:HGNC Symbol;Acc:HGNC:9502]
85. glra1 ENSDARG00000012019 315 1.748 - - - - - 0.769 0.979 - - glycine receptor, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-991117-1]
86. BX957337.1 BX957337.1 1685 1.745 - - - - - 0.841 0.904 - -
87. trim36 ENSDARG00000062794 785 1.743 - 0.795 - - - - 0.948 - - tripartite motif containing 36 [Source:ZFIN;Acc:ZDB-GENE-040426-2936]
88. stxbp1a ENSDARG00000001994 5154 1.743 - - - - - 0.803 0.940 - - syntaxin binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050626-106]
89. si:ch73-265d7.2 ENSDARG00000116713 2142 1.743 0.790 - - - - - 0.953 - - si:ch73-265d7.2 [Source:ZFIN;Acc:ZDB-GENE-100922-146]
90. sox21b ENSDARG00000008540 1460 1.742 0.772 - - - - - 0.970 - - SRY (sex determining region Y)-box 21b [Source:ZFIN;Acc:ZDB-GENE-040429-1]
91. appb ENSDARG00000055543, ENSDARG00000109552 4461 1.742 - - - - - 0.875 0.867 - - amyloid beta (A4) precursor protein b [Source:ZFIN;Acc:ZDB-GENE-020220-1]
92. scn1lab ENSDARG00000062744 155 1.74 - - - - - 0.818 0.922 - - sodium channel, voltage-gated, type I like, alpha b [Source:ZFIN;Acc:ZDB-GENE-060906-1]
93. dacha ENSDARG00000010132 648 1.74 - - - - - 0.797 0.943 - - dachshund a [Source:ZFIN;Acc:ZDB-GENE-020402-3]
94. gap43 ENSDARG00000099744 4114 1.739 - - - - - 0.803 0.936 - - growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
95. stmn1b ENSDARG00000033655 9491 1.739 - - - - - 0.764 0.975 - - stathmin 1b [Source:ZFIN;Acc:ZDB-GENE-050417-397]
96. CABZ01088330.1 CABZ01088330.1 679 1.738 - - - - - 0.899 0.839 - -
97. CABZ01115322.1 CABZ01115322.1 1283 1.738 - - - - - 0.841 0.897 - -
98. jagn1a ENSDARG00000041071, ENSDARG00000109427 397 1.736 - - - - - 0.810 0.926 - - jagunal homolog 1a [Source:ZFIN;Acc:ZDB-GENE-041010-80]
99. mir10d-1 mir10d-1 860 1.734 - - - - - 0.818 0.916 - -
100. nhlh2 ENSDARG00000025495 1860 1.732 0.742 - - - - - 0.990 - - nescient helix loop helix 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1809]

There are 1767 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA