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Results for pdzrn3b

Gene Name Gene ID Reads Annotation
pdzrn3b ENSDARG00000073869 1566 PDZ domain containing RING finger 3b [Source:ZFIN;Acc:ZDB-GENE-071022-4]










Genes with expression patterns similar to pdzrn3b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pdzrn3b ENSDARG00000073869 1566 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 PDZ domain containing RING finger 3b [Source:ZFIN;Acc:ZDB-GENE-071022-4]
2. paxip1 ENSDARG00000005606 1417 2.714 - - 0.980 - - - 0.813 - 0.921 PAX interacting (with transcription-activation domain) protein 1 [Source:ZFIN;Acc:ZDB-GENE-041010-214]
3. mcts1 ENSDARG00000025972 4662 2.561 - - 0.941 - - - 0.742 - 0.878 malignant T cell amplified sequence 1 [Source:ZFIN;Acc:ZDB-GENE-040426-957]
4. kifc1 ENSDARG00000001558 6658 2.465 - - 0.829 - - - 0.725 - 0.911 kinesin family member C1 [Source:ZFIN;Acc:ZDB-GENE-000208-21]
5. samm50l ENSDARG00000039681 2465 1.933 - - 0.976 - - - - - 0.957 sorting and assembly machinery component 50 homolog, like [Source:ZFIN;Acc:ZDB-GENE-041114-30]
6. anapc11 ENSDARG00000102531, ENSDARG00000116987 1769 1.894 - - 0.981 - - - - - 0.913 APC11 anaphase promoting complex subunit 11 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-061013-383]
7. olig2 ENSDARG00000040946 1405 1.889 - - 0.980 - - - - - 0.909 oligodendrocyte lineage transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4013]
8. eif4e3 ENSDARG00000005078 1624 1.882 - - 0.988 - - - - - 0.894 eukaryotic translation initiation factor 4E family member 3 [Source:ZFIN;Acc:ZDB-GENE-040912-156]
9. nploc4 ENSDARG00000100487 1262 1.874 - - 0.986 - - - - - 0.888 NPL4 homolog, ubiquitin recognition factor [Source:ZFIN;Acc:ZDB-GENE-030131-5658]
10. phc2b_1 ENSDARG00000013224 1316 1.87 - - 0.989 - - - - - 0.881 polyhomeotic homolog 2b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-1113]
11. gdi1 ENSDARG00000056122 4106 1.85 - - 0.973 - - - - - 0.877 GDP dissociation inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-050522-504]
12. tmem248 ENSDARG00000018825 1560 1.832 - - 0.989 - - - - - 0.843 transmembrane protein 248 [Source:ZFIN;Acc:ZDB-GENE-050320-103]
13. pabpn1 ENSDARG00000045373 4876 1.815 - - 0.876 - - - - - 0.939 poly(A) binding protein, nuclear 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2401]
14. arid1b ENSDARG00000092503 1376 1.81 - - 0.985 - - - - - 0.825 AT rich interactive domain 1B (SWI1-like) [Source:ZFIN;Acc:ZDB-GENE-030131-4459]
15. KRT18 ENSDARG00000018404, ENSDARG00000109528 6022 1.808 - - 0.967 - - - - - 0.841 keratin 18 [Source:ZFIN;Acc:ZDB-GENE-030411-6]
16. mrps18b ENSDARG00000007065 2121 1.807 - 0.900 - - - - - - 0.907 mitochondrial ribosomal protein S18B [Source:ZFIN;Acc:ZDB-GENE-050417-278]
17. fignl1 ENSDARG00000016427 636 1.797 - 0.804 0.993 - - - - - - fidgetin-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1862]
18. tjp1a ENSDARG00000077506 2658 1.794 - 0.819 0.975 - - - - - - tight junction protein 1a [Source:ZFIN;Acc:ZDB-GENE-031001-2]
19. polb ENSDARG00000003749 2049 1.787 - - 0.974 - - - 0.813 - - polymerase (DNA directed), beta [Source:ZFIN;Acc:ZDB-GENE-040830-1]
20. ranbp9 ENSDARG00000061048 2687 1.785 - - 0.972 - - - - - 0.813 RAN binding protein 9 [Source:ZFIN;Acc:ZDB-GENE-021030-5]
21. pbxip1b ENSDARG00000011824 3726 1.744 - - 0.891 - - - - - 0.853 pre-B-cell leukemia homeobox interacting protein 1b [Source:ZFIN;Acc:ZDB-GENE-070112-2032]
22. hprt1l ENSDARG00000014866 696 1.705 - 0.750 - - - - - - 0.955 hypoxanthine phosphoribosyltransferase 1, like [Source:ZFIN;Acc:ZDB-GENE-040625-17]
23. CLIP4 ENSDARG00000096961 363 1.701 - 0.710 0.991 - - - - - - CAP-Gly domain containing linker protein family member 4 [Source:HGNC Symbol;Acc:HGNC:26108]
24. PHB2 PHB2 3755 1.701 - 0.781 - - - - - - 0.920
25. zgc:101559 ENSDARG00000003257, ENSDARG00000112139, ENSDARG00000112819, ENSDARG00000115491 751 1.7 - - 0.994 - - 0.706 - - - zgc:101559 [Source:ZFIN;Acc:ZDB-GENE-041114-122]
26. lnpep ENSDARG00000100394 1436 1.699 - 0.853 - - - - - - 0.846 leucyl/cystinyl aminopeptidase [Source:ZFIN;Acc:ZDB-GENE-030131-1534]
27. rpf2 ENSDARG00000043960 2719 1.697 0.740 - 0.957 - - - - - - ribosome production factor 2 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2501]
28. ctnnbip1 ENSDARG00000038954 2519 1.692 - - 0.976 - - - 0.716 - - catenin, beta interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-000906-3]
29. TAF2 ENSDARG00000102307 1401 1.692 - 0.749 - - - - - - 0.943 TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-3207]
30. lmbr1 ENSDARG00000024092, ENSDARG00000116241 1418 1.691 - - 0.989 - - - 0.702 - - limb development membrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-090128-4]
31. smg5 ENSDARG00000041481 1286 1.687 - - 0.985 - - - 0.702 - - SMG5 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-050913-144]
32. ipo13 ENSDARG00000060618 827 1.686 - 0.776 - - - - - - 0.910 importin 13 [Source:ZFIN;Acc:ZDB-GENE-070706-1]
33. kansl2 ENSDARG00000056318, ENSDARG00000113311 4702 1.686 - - 0.956 - - - 0.730 - - KAT8 regulatory NSL complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-041010-67]
34. tmem63bb ENSDARG00000106631 503 1.685 - 0.755 - - - - - - 0.930 transmembrane protein 63Bb [Source:NCBI gene;Acc:569678]
35. zgc:109949 ENSDARG00000103413 426 1.683 - 0.765 - - - - - - 0.918 zgc:109949 [Source:ZFIN;Acc:ZDB-GENE-050522-166]
36. cnot3a ENSDARG00000007135 3084 1.682 - - 0.894 - - - - - 0.788 CCR4-NOT transcription complex, subunit 3a [Source:ZFIN;Acc:ZDB-GENE-040927-6]
37. ZBTB16 ZBTB16 3385 1.679 - - 0.938 - - - - - 0.741
38. tmem59l ENSDARG00000003655 1536 1.678 - - - - - - 0.744 - 0.934 transmembrane protein 59-like [Source:ZFIN;Acc:ZDB-GENE-040426-2651]
39. supt16h ENSDARG00000079949 4755 1.677 - - - - - - 0.787 - 0.890 SPT16 homolog, facilitates chromatin remodeling subunit [Source:ZFIN;Acc:ZDB-GENE-031118-96]
40. vcp ENSDARG00000020008, ENSDARG00000116074 2284 1.676 - - 0.723 - - - - - 0.953 valosin containing protein [Source:ZFIN;Acc:ZDB-GENE-030131-5408]
41. hira ENSDARG00000013434 2204 1.675 - - 0.923 - - - 0.752 - - histone cell cycle regulator a [Source:ZFIN;Acc:ZDB-GENE-030131-6296]
42. si:rp71-61h23.4 1921 1.663 - - - - - 0.788 - - 0.875 si:rp71-61h23.4
43. si:dkey-10p5.10 ENSDARG00000099307 371 1.662 - 0.712 - - - - - - 0.950 si:dkey-10p5.10 [Source:ZFIN;Acc:ZDB-GENE-120215-130]
44. wu:fb17g07 wu:fb17g07 10567 1.654 - 0.709 0.945 - - - - - -
45. zgc:113348 ENSDARG00000103795 1351 1.654 - - - - - - 0.714 - 0.940 zgc:113348 [Source:ZFIN;Acc:ZDB-GENE-050227-10]
46. RBM12B ENSDARG00000079717 541 1.653 - 0.702 - - - - - - 0.951 RNA binding motif protein 12B [Source:ZFIN;Acc:ZDB-GENE-030131-6428]
47. arid2 ENSDARG00000007413 4413 1.652 - 0.728 0.924 - - - - - - AT rich interactive domain 2 (ARID, RFX-like) [Source:ZFIN;Acc:ZDB-GENE-030131-6311]
48. tspan5b ENSDARG00000070449 1056 1.652 - - - - - - 0.706 - 0.946 tetraspanin 5b [Source:ZFIN;Acc:ZDB-GENE-041212-12]
49. taz ENSDARG00000041421 985 1.65 - - - - - - - 0.720 0.930 tafazzin [Source:ZFIN;Acc:ZDB-GENE-030131-684]
50. CABZ01087568.1 CABZ01087568.1 1487 1.647 - - - - - - 0.785 - 0.862
51. slc20a2 ENSDARG00000060796, ENSDARG00000113613 5420 1.638 - 0.706 0.932 - - - - - - solute carrier family 20 (phosphate transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-060929-828]
52. cks2 ENSDARG00000071410, ENSDARG00000116198 966 1.634 - 0.749 - - - - - - 0.885 CDC28 protein kinase regulatory subunit 2 [Source:ZFIN;Acc:ZDB-GENE-050208-508]
53. gstm gstm 4064 1.633 - - 0.902 - - - 0.731 - -
54. arhgef4 ENSDARG00000012914 1464 1.626 - 0.783 - - - - - - 0.843 Rho guanine nucleotide exchange factor (GEF) 4 [Source:ZFIN;Acc:ZDB-GENE-070912-575]
55. ttc14 ENSDARG00000013845 1192 1.624 - - - - - - 0.749 - 0.875 tetratricopeptide repeat domain 14 [Source:ZFIN;Acc:ZDB-GENE-050327-26]
56. nfkbiab ENSDARG00000007693 1345 1.605 - - - - - - 0.738 - 0.867 nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-1819]
57. psmb7 ENSDARG00000037962 11542 1.595 - - 0.847 - - - 0.748 - - proteasome subunit beta 7 [Source:ZFIN;Acc:ZDB-GENE-001208-4]
58. ankhd1 ENSDARG00000077860 5510 1.593 - - - - - - 0.714 - 0.879 ankyrin repeat and KH domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-090421-1]
59. vdac1 ENSDARG00000045132 8051 1.576 - - 0.795 - - - 0.781 - - voltage-dependent anion channel 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6514]
60. BX255936.1 BX255936.1 327 1.559 - 0.810 - - - 0.749 - - -
61. LIG1 ENSDARG00000060041, ENSDARG00000110159, ENSDARG00000113788 8110 1.553 - - - - - - 0.712 - 0.841 ligase I, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-110404-2]
62. dazap2 ENSDARG00000007867 1805 1.55 - - - - - 0.747 - - 0.803 DAZ associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3036]
63. cltcb ENSDARG00000090716 5544 1.546 - - - - - - 0.765 - 0.781 clathrin, heavy chain b (Hc) [Source:ZFIN;Acc:ZDB-GENE-050227-12]
64. cpsf3 ENSDARG00000027649 6897 1.543 - - 0.782 - - - 0.761 - - cleavage and polyadenylation specific factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3275]
65. pdss2 ENSDARG00000012563 984 1.532 - 0.815 - - - - 0.717 - - prenyl (decaprenyl) diphosphate synthase, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040718-43]
66. gna11a ENSDARG00000010002, ENSDARG00000111208 1303 1.516 - - - - - 0.722 0.794 - - guanine nucleotide binding protein (G protein), alpha 11a (Gq class) [Source:ZFIN;Acc:ZDB-GENE-050208-597]
67. tshz1 ENSDARG00000005026 1948 1.516 - - 0.722 - - - 0.794 - - teashirt zinc finger homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030820-3]
68. ldb2b ENSDARG00000034896, ENSDARG00000113987, ENSDARG00000116485 976 1.513 - 0.741 - - - - - - 0.772 LIM domain binding 2b [Source:ZFIN;Acc:ZDB-GENE-990415-137]
69. dnajc7 ENSDARG00000058148 869 1.506 - 0.788 - - - - 0.718 - - DnaJ (Hsp40) homolog, subfamily C, member 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2483]
70. cbl ENSDARG00000009958 1321 1.503 - - - - - 0.741 0.762 - - Cbl proto-oncogene, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-041114-207]
71. syncripl ENSDARG00000026723 3889 1.5 - - - - - - 0.702 - 0.798 synaptotagmin binding, cytoplasmic RNA interacting protein, like [Source:ZFIN;Acc:ZDB-GENE-030131-3104]
72. sox6 ENSDARG00000015536 7728 1.5 - - 0.793 - - - 0.707 - - SRY (sex determining region Y)-box 6 [Source:ZFIN;Acc:ZDB-GENE-081120-6]
73. prpf4bb ENSDARG00000040310 2260 1.494 - - - - - - 0.703 - 0.791 pre-mRNA processing factor 4Bb [Source:ZFIN;Acc:ZDB-GENE-040426-2799]
74. fat1 fat1 3934 1.485 - 0.777 - - - - 0.708 - -
75. aspg ENSDARG00000052942 1406 1.477 - 0.770 - - - - - 0.707 - asparaginase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-070820-14]
76. smarce1 ENSDARG00000016871 9628 1.474 - - 0.751 - - - 0.723 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-967]
77. myef2 ENSDARG00000059398 6050 1.474 - 0.716 - - - - 0.758 - - myelin expression factor 2 [Source:ZFIN;Acc:ZDB-GENE-051120-114]
78. u2af2b ENSDARG00000011740 6946 1.462 - - - - - - 0.724 - 0.738 U2 small nuclear RNA auxiliary factor 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1881]
79. ncalda ENSDARG00000070688 5069 1.46 - - - - - - 0.758 - 0.702 neurocalcin delta a [Source:ZFIN;Acc:ZDB-GENE-080220-28]
80. fbxl5 ENSDARG00000043046 1403 1.458 - - - - - 0.727 0.731 - - F-box and leucine-rich repeat protein 5 [Source:ZFIN;Acc:ZDB-GENE-030131-900]
81. mrps27 ENSDARG00000059234 802 1.456 - 0.741 - - - - - 0.715 - mitochondrial ribosomal protein S27 [Source:ZFIN;Acc:ZDB-GENE-040808-39]
82. ppp1r3cb ENSDARG00000014554 2507 1.453 - 0.711 - - - - - - 0.742 protein phosphatase 1, regulatory subunit 3Cb [Source:ZFIN;Acc:ZDB-GENE-040426-1733]
83. mtss1l mtss1l 2494 1.446 - - - - - - 0.711 - 0.735
84. CABZ01028296.1 CABZ01028296.1 6203 1.442 - - - - - - 0.731 - 0.711
85. ispd ENSDARG00000005034 173 1.44 - 0.729 - - - 0.711 - - - isoprenoid synthase domain containing [Source:ZFIN;Acc:ZDB-GENE-061110-16]
86. MATR3 MATR3 3962 1.415 - - - - - 0.706 - - 0.709
87. cul4b ENSDARG00000060510 6053 1.406 - - 0.706 - - 0.700 - - - cullin 4B [Source:ZFIN;Acc:ZDB-GENE-041008-208]
88. RAB39B RAB39B 482 0.993 - - 0.993 - - - - - -
89. dyrk1ab ENSDARG00000023814 1769 0.993 - - 0.993 - - - - - - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A, b [Source:ZFIN;Acc:ZDB-GENE-030131-5677]
90. lipt1 ENSDARG00000025233 385 0.993 - - 0.993 - - - - - - lipoyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-060929-112]
91. DNAJC16 ENSDARG00000059699 507 0.993 - - 0.993 - - - - - - DnaJ (Hsp40) homolog, subfamily C, member 16 [Source:ZFIN;Acc:ZDB-GENE-130530-683]
92. lrp12 ENSDARG00000098845 999 0.993 - - 0.993 - - - - - - low density lipoprotein receptor-related protein 12 [Source:ZFIN;Acc:ZDB-GENE-060503-399]
93. pycr1 pycr1 1258 0.993 - - 0.993 - - - - - -
94. gata1b ENSDARG00000059130 151 0.993 - - 0.993 - - - - - - GATA binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-081104-43]
95. U1_25 U1_25 283 0.993 - - 0.993 - - - - - -
96. mfsd4a mfsd4a 179 0.993 - - 0.993 - - - - - -
97. nrg1 ENSDARG00000104314 1081 0.993 - - 0.993 - - - - - - neuregulin 1 [Source:ZFIN;Acc:ZDB-GENE-050302-113]
98. zgc:171673 ENSDARG00000102473 256 0.993 - - 0.993 - - - - - - zgc:171673 [Source:ZFIN;Acc:ZDB-GENE-071004-20]
99. PPP1R16B ENSDARG00000079860 390 0.993 - - 0.993 - - - - - - protein phosphatase 1, regulatory subunit 16B [Source:ZFIN;Acc:ZDB-GENE-131127-294]
100. sema3fa ENSDARG00000011163 759 0.992 - - 0.992 - - - - - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fa [Source:ZFIN;Acc:ZDB-GENE-050513-1]

There are 1426 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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