Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for pdzd4

Gene Name Gene ID Reads Annotation
pdzd4 175 PDZ domain containing 4, transcript variant X2










Genes with expression patterns similar to pdzd4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pdzd4 175 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 PDZ domain containing 4, transcript variant X2
2. inaa ENSDARG00000011862 115 3.262 0.972 - - - 0.728 - 0.832 0.730 - internexin neuronal intermediate filament protein, alpha a [Source:ZFIN;Acc:ZDB-GENE-060531-65]
3. SMARCA4 ENSDARG00000104339 48 2.757 - 1.000 - - - 0.843 0.914 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 [Source:HGNC Symbol;Acc:HGNC:11100]
4. si:dkey-193c22.1 ENSDARG00000093687 104 2.72 - 1.000 - - - 0.806 0.914 - - si:dkey-193c22.1 [Source:ZFIN;Acc:ZDB-GENE-030131-7957]
5. mb21d2a mb21d2a 421 2.704 - 0.835 - - - 0.886 0.983 - -
6. atp2b2 ENSDARG00000044902, ENSDARG00000063433 140 2.7 - 1.000 - - - 0.866 0.834 - - ATPase plasma membrane Ca2+ transporting 2 [Source:ZFIN;Acc:ZDB-GENE-061016-1]
7. bhlhe22 ENSDARG00000058039 1673 2.645 - 0.954 - - - 0.839 0.852 - - basic helix-loop-helix family, member e22 [Source:ZFIN;Acc:ZDB-GENE-040426-1411]
8. cacng2a ENSDARG00000032565 99 2.644 - 1.000 - - - 0.730 0.914 - - calcium channel, voltage-dependent, gamma subunit 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1401]
9. CABZ01007222.1 CABZ01007222.1 78 2.641 0.872 1.000 - - - 0.769 - - -
10. elavl4 ENSDARG00000045639 998 2.62 - 0.794 - - - 0.945 0.881 - - ELAV like neuron-specific RNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-990415-246]
11. gpr61 ENSDARG00000055570 128 2.579 - 1.000 - - - 0.861 - 0.718 - G protein-coupled receptor 61 [Source:ZFIN;Acc:ZDB-GENE-081104-239]
12. lhfpl4a ENSDARG00000111810 206 2.534 - 0.875 - - - 0.717 0.942 - - lipoma HMGIC fusion partner-like 4a [Source:ZFIN;Acc:ZDB-GENE-111017-1]
13. lhx1b ENSDARG00000007944, ENSDARG00000111635 254 2.478 - 0.880 - - - 0.862 0.736 - - LIM homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-980526-116]
14. fam43b ENSDARG00000070222 92 2.466 - 1.000 - - - 0.763 0.703 - - family with sequence similarity 43, member B [Source:ZFIN;Acc:ZDB-GENE-040912-11]
15. fam49a ENSDARG00000006672 939 2.464 - - - - - 0.779 0.720 0.965 - family with sequence similarity 49, member A [Source:ZFIN;Acc:ZDB-GENE-031002-50]
16. nhlh2 ENSDARG00000025495 1860 2.44 - 0.829 - - - 0.830 0.781 - - nescient helix loop helix 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1809]
17. cacng8b ENSDARG00000070626 176 2.428 - 0.794 - - - 0.704 0.930 - - calcium channel, voltage-dependent, gamma subunit 8b [Source:ZFIN;Acc:ZDB-GENE-100921-72]
18. slc35g2b ENSDARG00000045447 378 2.402 - 0.711 - - - 0.929 0.762 - - solute carrier family 35, member G2b [Source:ZFIN;Acc:ZDB-GENE-050320-142]
19. sox19b ENSDARG00000040266 532 2.353 - 0.728 - - - 0.796 0.829 - - SRY (sex determining region Y)-box 19b [Source:ZFIN;Acc:ZDB-GENE-010111-1]
20. E2F2 E2F2 871 2.274 - - - - 0.757 0.796 - 0.721 -
21. BX324131.3 BX324131.3 278 2.252 - 0.760 - - - 0.773 - 0.719 -
22. RPGRIP1 ENSDARG00000076055 10 1.965 0.965 1.000 - - - - - - - RPGR interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-091204-394]
23. si:dkeyp-104f11.4 si:dkeyp-104f11.4 40 1.964 0.964 1.000 - - - - - - -
24. erap2 ENSDARG00000098618 16 1.934 - 1.000 - - - - 0.934 - - endoplasmic reticulum aminopeptidase 2 [Source:ZFIN;Acc:ZDB-GENE-080402-6]
25. arhgef9a ENSDARG00000061746 58 1.921 - 1.000 - - - - 0.921 - - Cdc42 guanine nucleotide exchange factor (GEF) 9a [Source:ZFIN;Acc:ZDB-GENE-070705-271]
26. BX470131.1 BX470131.1 86 1.921 - 1.000 - - - - 0.921 - -
27. LMTK3 LMTK3 222 1.918 - 1.000 - - - - 0.918 - -
28. chrna6 ENSDARG00000055559 60 1.916 - 1.000 - - - 0.916 - - - cholinergic receptor, nicotinic, alpha 6 [Source:ZFIN;Acc:ZDB-GENE-090312-91]
29. plscr3a ENSDARG00000093078 7 1.914 - 1.000 - - - - 0.914 - - phospholipid scramblase 3a [Source:ZFIN;Acc:ZDB-GENE-060531-17]
30. FGFBP3 FGFBP3 993 1.914 - - - - - 0.934 0.980 - -
31. rassf4 ENSDARG00000012460 43 1.914 - 1.000 - - - - 0.914 - - Ras association (RalGDS/AF-6) domain family member 4 [Source:ZFIN;Acc:ZDB-GENE-050102-3]
32. cdk5r1a ENSDARG00000037916 46 1.914 - 1.000 - - - - 0.914 - - cyclin-dependent kinase 5, regulatory subunit 1a (p35) [Source:ZFIN;Acc:ZDB-GENE-080723-17]
33. cldnd ENSDARG00000006580 17 1.914 - 1.000 - - - - 0.914 - - claudin d [Source:ZFIN;Acc:ZDB-GENE-010328-4]
34. fez1 ENSDARG00000023174 701 1.91 - 1.000 - - - - 0.910 - - fasciculation and elongation protein zeta 1 (zygin I) [Source:ZFIN;Acc:ZDB-GENE-040426-2723]
35. pcbp3 ENSDARG00000054378 74 1.894 - 1.000 - - - - 0.894 - - poly(rC) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-050522-157]
36. PRR12 PRR12 38 1.882 - 1.000 - - - 0.882 - - -
37. lhx5 ENSDARG00000057936 785 1.879 - 1.000 - - - - 0.879 - - LIM homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-484]
38. TMEM57 TMEM57 260 1.871 - 1.000 - - - - 0.871 - -
39. dtnbp1b ENSDARG00000055206 64 1.854 - - - - - 0.914 0.940 - - dystrobrevin binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-060503-889]
40. DOCK4 DOCK4 78 1.854 - 1.000 - - - - 0.854 - -
41. FAM171A2 FAM171A2 707 1.851 - - - - - - 0.952 0.899 -
42. gpr27 ENSDARG00000006607 125 1.847 0.965 - - - - - 0.882 - - G protein-coupled receptor 27 [Source:ZFIN;Acc:ZDB-GENE-071022-3]
43. TUBB8P7_2 TUBB8P7_2 565 1.846 - - - - - 0.890 0.956 - -
44. BX321870.1 ENSDARG00000098519 9 1.846 - 1.000 - - 0.846 - - - -
45. clstn3 ENSDARG00000073883 590 1.841 - - - - - 0.896 0.945 - - calsyntenin 3 [Source:ZFIN;Acc:ZDB-GENE-100921-73]
46. zgc:153615 ENSDARG00000038981 105 1.837 - 1.000 - - - - 0.837 - - zgc:153615 [Source:ZFIN;Acc:ZDB-GENE-061110-79]
47. nat8l ENSDARG00000077256, ENSDARG00000115322 3513 1.834 - - - - - 0.888 0.946 - - N-acetyltransferase 8-like [Source:ZFIN;Acc:ZDB-GENE-030729-4]
48. PRKAR2B ENSDARG00000036446 812 1.824 - - - - - 0.909 0.915 - - protein kinase cAMP-dependent type II regulatory subunit beta [Source:HGNC Symbol;Acc:HGNC:9392]
49. scg2b ENSDARG00000038574 345 1.823 - 1.000 - - - - 0.823 - - secretogranin II (chromogranin C), b [Source:ZFIN;Acc:ZDB-GENE-061103-160]
50. sypb ENSDARG00000002230 262 1.818 - - - - - 0.893 0.925 - - synaptophysin b [Source:ZFIN;Acc:ZDB-GENE-040718-205]
51. mapk11 ENSDARG00000045836 846 1.812 - - - - - 0.892 - 0.920 - mitogen-activated protein kinase 11 [Source:ZFIN;Acc:ZDB-GENE-040625-75]
52. kcnd1 ENSDARG00000074746 153 1.808 - - - - - 0.878 0.930 - - potassium voltage-gated channel, Shal-related subfamily, member 1 [Source:ZFIN;Acc:ZDB-GENE-081105-40]
53. mfge8a ENSDARG00000015349 66 1.805 0.930 0.875 - - - - - - - milk fat globule-EGF factor 8 protein a [Source:ZFIN;Acc:ZDB-GENE-050327-9]
54. lhx1a ENSDARG00000014018 958 1.802 - - - - - 0.855 0.947 - - LIM homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-347]
55. CABZ01073954.1 CABZ01073954.1 258 1.801 - 1.000 - - - 0.801 - - -
56. ROBO3_1 ROBO3_1 468 1.801 - 0.893 - - - - 0.908 - -
57. slc8a2b ENSDARG00000100592 598 1.796 - - - - - 0.892 0.904 - - solute carrier family 8 (sodium/calcium exchanger), member 2b [Source:ZFIN;Acc:ZDB-GENE-050419-209]
58. ntrk2a ENSDARG00000059897 185 1.794 - - - - - 0.873 0.921 - - neurotrophic tyrosine kinase, receptor, type 2a [Source:ZFIN;Acc:ZDB-GENE-010126-1]
59. pigf ENSDARG00000032780 7 1.794 - 0.880 - - - - 0.914 - - phosphatidylinositol glycan anchor biosynthesis, class F [Source:ZFIN;Acc:ZDB-GENE-040426-1801]
60. necab2 ENSDARG00000056745, ENSDARG00000110976 304 1.793 - - - - - 0.867 0.926 - - N-terminal EF-hand calcium binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-050706-167]
61. gabrb3 ENSDARG00000023771, ENSDARG00000114822 180 1.786 - 1.000 - - - - 0.786 - - gamma-aminobutyric acid (GABA) A receptor, beta 3 [Source:ZFIN;Acc:ZDB-GENE-101102-2]
62. gsx1 ENSDARG00000035735 1243 1.784 - - - - - 0.880 0.904 - - GS homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-041008-135]
63. chrna3 ENSDARG00000100991, ENSDARG00000116434 63 1.784 - - - - - 0.873 0.911 - - cholinergic receptor, nicotinic, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-070822-1]
64. dbx2 2971 1.783 - - - - - 0.879 0.904 - - developing brain homeobox 2
65. cdk5r1b ENSDARG00000045087 2075 1.781 - - - - - 0.863 0.918 - - cyclin-dependent kinase 5, regulatory subunit 1b (p35) [Source:ZFIN;Acc:ZDB-GENE-040718-220]
66. EPB41L1 EPB41L1 1896 1.781 - - - - - 0.833 0.948 - -
67. SAMD14 145 1.776 - - - - - 0.836 0.940 - - sterile alpha motif domain containing 14, transcript variant X3
68. fgf13b ENSDARG00000056633 455 1.775 - - - - - 0.892 0.883 - - fibroblast growth factor 13b [Source:ZFIN;Acc:ZDB-GENE-040426-1793]
69. calm3a ENSDARG00000015050, ENSDARG00000100825 1817 1.77 - - - - - 0.915 0.855 - - calmodulin 3a (phosphorylase kinase, delta) [Source:ZFIN;Acc:ZDB-GENE-030131-5590]
70. fstl5 ENSDARG00000040198 213 1.768 - - - - - 0.970 0.798 - - follistatin-like 5 [Source:ZFIN;Acc:ZDB-GENE-070127-1]
71. INA INA 950 1.766 - - - - - 0.812 0.954 - -
72. dnajc5aa ENSDARG00000042948 2885 1.764 - - - - - 0.888 0.876 - - DnaJ (Hsp40) homolog, subfamily C, member 5aa [Source:ZFIN;Acc:ZDB-GENE-031113-20]
73. cspg5a ENSDARG00000069981 1699 1.763 - - - - - 0.938 0.825 - - chondroitin sulfate proteoglycan 5a [Source:ZFIN;Acc:ZDB-GENE-080425-4]
74. skor1b ENSDARG00000062448, ENSDARG00000112341 282 1.763 - - - - - 0.847 0.916 - - SKI family transcriptional corepressor 1b [Source:ZFIN;Acc:ZDB-GENE-050419-82]
75. pax6a ENSDARG00000103379 3061 1.762 - - - - - 0.813 0.949 - - paired box 6a [Source:ZFIN;Acc:ZDB-GENE-990415-200]
76. kcnip1b ENSDARG00000034808, ENSDARG00000111766 136 1.761 0.965 - - - - - 0.796 - - Kv channel interacting protein 1 b [Source:ZFIN;Acc:ZDB-GENE-041212-57]
77. lrrtm1 ENSDARG00000052713 1041 1.761 - - - - - 0.939 0.822 - - leucine rich repeat transmembrane neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-050506-80]
78. stx1b ENSDARG00000000503 2724 1.752 - - - - - 0.828 0.924 - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
79. evx2 ENSDARG00000059255 317 1.75 - - - - - 0.825 0.925 - - even-skipped homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-980526-215]
80. prdm14 ENSDARG00000045371 106 1.75 - - - - - 0.836 0.914 - - PR domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-030131-2709]
81. syt4 ENSDARG00000036505 421 1.745 - - - - - 0.832 0.913 - - synaptotagmin IV [Source:ZFIN;Acc:ZDB-GENE-030131-7297]
82. syngr3a ENSDARG00000014871 405 1.745 - - - - - 0.951 0.794 - - synaptogyrin 3a [Source:ZFIN;Acc:ZDB-GENE-050522-541]
83. LINGO2 LINGO2 300 1.744 - 0.880 - - - - 0.864 - -
84. rbfox3 rbfox3 1443 1.743 - - - - - 0.807 0.936 - -
85. sall3b ENSDARG00000057586 982 1.742 - - - - - 0.842 0.900 - - spalt-like transcription factor 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9140]
86. BX000703.2 BX000703.2 10 1.739 - 1.000 0.739 - - - - - -
87. ntng2a ENSDARG00000077367 43 1.738 - - - - - 0.824 0.914 - - netrin g2a [Source:ZFIN;Acc:ZDB-GENE-081105-186]
88. cacna1g ENSDARG00000089913 19 1.738 - - - - - 0.824 0.914 - - calcium channel, voltage-dependent, T type, alpha 1G subunit [Source:ZFIN;Acc:ZDB-GENE-090514-2]
89. MPP3_1 MPP3_1 88 1.738 - - - - - 0.805 0.933 - -
90. GADD45G_1 GADD45G_1 236 1.737 - 1.000 - - - 0.737 - - -
91. st6gal1 ENSDARG00000044514 142 1.736 - 1.000 - - - - 0.736 - - ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 [Source:ZFIN;Acc:ZDB-GENE-060322-3]
92. scn8aa ENSDARG00000005775 792 1.735 - - - - - 0.810 0.925 - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
93. dpysl3 ENSDARG00000002587 4381 1.735 - - - - - 0.854 0.881 - - dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
94. itm2ca ENSDARG00000043448 1265 1.734 - - - - - 0.862 0.872 - - integral membrane protein 2Ca [Source:ZFIN;Acc:ZDB-GENE-040718-284]
95. pcp4b 1080 1.734 - - - - - 0.847 0.887 - - Purkinje cell protein 4b
96. clstn1 ENSDARG00000031720 5286 1.733 - - - - - 0.907 0.826 - - calsyntenin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1064]
97. rab39b rab39b 449 1.729 - - - - - 0.850 0.879 - -
98. nell2b ENSDARG00000062797 854 1.725 - - - - - 0.816 0.909 - - neural EGFL like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-8026]
99. GRIN3A ENSDARG00000075802 27 1.724 - - - - - 0.894 0.830 - - glutamate receptor, ionotropic, N-methyl-D-aspartate 3A [Source:ZFIN;Acc:ZDB-GENE-130530-780]
100. pcyt1ba ENSDARG00000058162 206 1.723 - 1.000 - - - - - 0.723 - phosphate cytidylyltransferase 1, choline, beta a [Source:ZFIN;Acc:ZDB-GENE-061220-4]

There are 2050 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA