Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for pdzd3b

Gene Name Gene ID Reads Annotation
pdzd3b ENSDARG00000055656 3 PDZ domain containing 3b [Source:ZFIN;Acc:ZDB-GENE-081022-151]










Genes with expression patterns similar to pdzd3b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pdzd3b ENSDARG00000055656 3 2 - - - - - - 1.000 - 1.000 PDZ domain containing 3b [Source:ZFIN;Acc:ZDB-GENE-081022-151]
2. grid2ipb ENSDARG00000095603, ENSDARG00000111282 90 1.824 - - - - - - 0.953 - 0.871 glutamate receptor, ionotropic, delta 2 (Grid2) interacting protein, b [Source:ZFIN;Acc:ZDB-GENE-040724-161]
3. cx28.9 ENSDARG00000041797 12 1 - - - - - - - - 1.000 connexin 28.9 [Source:ZFIN;Acc:ZDB-GENE-041114-200]
4. si:rp71-1h20.5 ENSDARG00000098176 3 1 - - - - - - - - 1.000 si:rp71-1h20.5 [Source:ZFIN;Acc:ZDB-GENE-030131-7869]
5. CABZ01118266.1 CABZ01118266.1 1 1 - - - - - - - - 1.000
6. si:dkey-3h2.2 ENSDARG00000110810 1 1 - - - - - - - - 1.000 si:dkey-3h2.2 [Source:ZFIN;Acc:ZDB-GENE-070705-464]
7. nms 19 1 - - - - - - - - 1.000 neuromedin S, transcript variant X1
8. si:dkey-126h10.2 si:dkey-126h10.2 3 1 - - - - - - - - 1.000
9. si:ch211-160b11.4 ENSDARG00000076122 1 1 - - - - - - - - 1.000 si:ch211-160b11.4 [Source:ZFIN;Acc:ZDB-GENE-081104-142]
10. si:ch211-160d14.11 si:ch211-160d14.11 2 1 - - - - - - 1.000 - -
11. ftr30 ENSDARG00000095448 1 1 - - - - - - - - 1.000 finTRIM family, member 30 [Source:ZFIN;Acc:ZDB-GENE-070912-106]
12. PTCHD2 PTCHD2 2 1 - - - - - - - - 1.000
13. trpc6a ENSDARG00000056625, ENSDARG00000111066 4 1 - - - - - - - - 1.000 transient receptor potential cation channel, subfamily C, member 6a [Source:ZFIN;Acc:ZDB-GENE-040724-114]
14. BX004873.1 ENSDARG00000100864 2 1 - - - - - - - - 1.000
15. AP1M1 ENSDARG00000096249 4 1 - - - - - - - - 1.000 adaptor related protein complex 1 subunit mu 1 [Source:ZFIN;Acc:ZDB-GENE-110126-1]
16. calml4a ENSDARG00000075800 14 1 - - - - - - - - 1.000 calmodulin-like 4a [Source:ZFIN;Acc:ZDB-GENE-081022-9]
17. si:dkeyp-59a8.2 si:dkeyp-59a8.2 1 1 - - - - - - - - 1.000
18. cfhl4 ENSDARG00000102456, ENSDARG00000116951 16 1 - - - - - - - - 1.000 complement factor H like 4 [Source:ZFIN;Acc:ZDB-GENE-030131-251]
19. si:dkey-40h17.5 si:dkey-40h17.5 1 1 - - - - - - - - 1.000
20. si:dkey-220o21.3 ENSDARG00000103079 1 1 - - - - - - - - 1.000 si:dkey-220o21.3 [Source:ZFIN;Acc:ZDB-GENE-110914-75]
21. si:dkey-71b5.2 si:dkey-71b5.2 10 1 - - - - - - - - 1.000
22. si:dkey-179j5.2 si:dkey-179j5.2 1 1 - - - - - - - - 1.000
23. tmem196b ENSDARG00000090140 20 1 - - - - - - - - 1.000 transmembrane protein 196b [Source:ZFIN;Acc:ZDB-GENE-110914-248]
24. zgc:174708 zgc:174708 11 1 - - - - - - - - 1.000
25. si:ch211-14a17.10 ENSDARG00000076534 12 1 - - - - - - - - 1.000 si:ch211-14a17.10 [Source:ZFIN;Acc:ZDB-GENE-030616-581]
26. cd4 cd4 4 1 - - - - - - - - 1.000
27. pdk3b ENSDARG00000099791 50 0.991 - - - - - - 0.991 - - pyruvate dehydrogenase kinase, isozyme 3b [Source:ZFIN;Acc:ZDB-GENE-070112-1892]
28. sybl1 ENSDARG00000030775, ENSDARG00000116685 201 0.988 - - - - - - 0.988 - - synaptobrevin-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1055]
29. ZNF835 ZNF835 6 0.981 - - - - - - - - 0.981
30. BX005356.2 BX005356.2 2 0.981 - - - - - - - - 0.981
31. si:dkeyp-59a8.1 si:dkeyp-59a8.1 6 0.981 - - - - - - - - 0.981
32. cldn17 ENSDARG00000099950 14 0.978 - - - - - - 0.978 - - claudin 17 [Source:ZFIN;Acc:ZDB-GENE-070821-2]
33. si:ch211-190k17.31 si:ch211-190k17.31 29 0.975 - - - - - - 0.975 - -
34. foxl1 ENSDARG00000008133, ENSDARG00000111418 64 0.973 - - - - - - 0.973 - - forkhead box L1 [Source:ZFIN;Acc:ZDB-GENE-040426-1181]
35. adprm ENSDARG00000026090 91 0.973 - - - - - - 0.973 - - ADP-ribose/CDP-alcohol diphosphatase, manganese-dependent [Source:ZFIN;Acc:ZDB-GENE-040426-1406]
36. BX927369.7 BX927369.7 12 0.966 - - - - - - 0.966 - -
37. GOLT1A ENSDARG00000088933 14 0.966 - - - - - - 0.966 - - golgi transport 1A [Source:ZFIN;Acc:ZDB-GENE-141212-320]
38. zgc:172065 ENSDARG00000078093 2 0.966 - - - - - - 0.966 - - zgc:172065 [Source:ZFIN;Acc:ZDB-GENE-080214-2]
39. cryba2a ENSDARG00000030349 1342 0.966 - - - - - - 0.966 - - crystallin, beta A2a [Source:ZFIN;Acc:ZDB-GENE-040625-8]
40. trim35-37 trim35-37 2 0.966 - - - - - - 0.966 - -
41. zgc:110782 ENSDARG00000044544 48 0.966 - - - - - - 0.966 - - zgc:110782 [Source:ZFIN;Acc:ZDB-GENE-050320-51]
42. chmp2ba ENSDARG00000068683, ENSDARG00000113182, ENSDARG00000114167 20 0.966 - - - - - - 0.966 - - charged multivesicular body protein 2Ba [Source:ZFIN;Acc:ZDB-GENE-070628-3]
43. si:dkey-153n9.5 si:dkey-153n9.5 20 0.966 - - - - - - 0.966 - -
44. apnl ENSDARG00000090900 21 0.966 - - - - - - 0.966 - - actinoporin-like protein [Source:ZFIN;Acc:ZDB-GENE-030131-8907]
45. AL844186.1 ENSDARG00000114351 41 0.966 - - - - - - 0.966 - -
46. LIX1 ENSDARG00000052154 9 0.966 - - - - - - 0.966 - - limb and CNS expressed 1 [Source:ZFIN;Acc:ZDB-GENE-060526-123]
47. zgc:174224_1 ENSDARG00000093875 7 0.966 - - - - - - 0.966 - - zgc:174224 [Source:ZFIN;Acc:ZDB-GENE-071004-118]
48. si:ch211-76l23.4 ENSDARG00000096242 202 0.966 - - - - - - 0.966 - - si:ch211-76l23.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8310]
49. upk3l upk3l 61 0.966 - - - - - - 0.966 - -
50. zgc:153039 ENSDARG00000102724 4 0.966 - - - - - - 0.966 - - zgc:153039 [Source:ZFIN;Acc:ZDB-GENE-060929-736]
51. bik ENSDARG00000045549 18 0.966 - - - - - - 0.966 - - BCL2 interacting killer [Source:ZFIN;Acc:ZDB-GENE-041210-181]
52. si:ch211-117n7.8 si:ch211-117n7.8 83 0.966 - - - - - - 0.966 - -
53. C24H16orf11 C24H16orf11 32 0.966 - - - - - - 0.966 - -
54. si:dkey-234l24.8 ENSDARG00000093588 7 0.966 - - - - - - 0.966 - - si:dkey-234l24.8 [Source:ZFIN;Acc:ZDB-GENE-050420-23]
55. dysf ENSDARG00000007370 125 0.966 - - - - - - 0.966 - - dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive) [Source:ZFIN;Acc:ZDB-GENE-070501-1]
56. SI:DKEY-79P17.2 SI:DKEY-79P17.2 3 0.966 - - - - - - 0.966 - -
57. zp2.2 ENSDARG00000105346 23 0.966 - - - - - - 0.966 - - zona pellucida glycoprotein 2, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-010622-1]
58. PDILT PDILT 6 0.966 - - - - - - 0.966 - -
59. PLEKHS1_1 PLEKHS1_1 23 0.966 - - - - - - 0.966 - -
60. myo10l1 ENSDARG00000074723 21 0.966 - - - - - - 0.966 - - myosin X-like 1 [Source:ZFIN;Acc:ZDB-GENE-080425-1]
61. inhbab ENSDARG00000024759 29 0.966 - - - - - - 0.966 - - inhibin subunit beta Ab [Source:ZFIN;Acc:ZDB-GENE-050525-2]
62. CR631122.1 ENSDARG00000044534 8 0.966 - - - - - - 0.966 - - protein RD3-like [Source:NCBI gene;Acc:100149591]
63. slc22a5 ENSDARG00000101021 20 0.966 - - - - - - 0.966 - - solute carrier family 22 (organic cation/carnitine transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-091012-1]
64. btr09 ENSDARG00000054805, ENSDARG00000115798 20 0.966 - - - - - - 0.966 - - bloodthirsty-related gene family, member 9 [Source:ZFIN;Acc:ZDB-GENE-080722-46]
65. hbl3 11 0.966 - - - - - - 0.966 - - hexose-binding lectin 3, transcript variant X1
66. srd5a2b ENSDARG00000039067 4 0.965 - - - - - - - - 0.965 steroid-5-alpha-reductase, alpha polypeptide 2b [Source:ZFIN;Acc:ZDB-GENE-050417-182]
67. nphs2 ENSDARG00000042850 31 0.965 - - - - - - - - 0.965 nephrosis 2, idiopathic, steroid-resistant (podocin) [Source:ZFIN;Acc:ZDB-GENE-051102-2]
68. si:dkey-14a7.2 si:dkey-14a7.2 61 0.965 - - - - - - 0.965 - -
69. rhbdl1 ENSDARG00000087040 23 0.964 - - - - - - 0.964 - - rhomboid, veinlet-like 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-120529-2]
70. hoxc13a ENSDARG00000070353 4815 0.962 - - - - - - 0.962 - - homeobox C13a [Source:ZFIN;Acc:ZDB-GENE-000822-4]
71. si:dkey-211g8.6 ENSDARG00000063088 19 0.958 - - - - - - - - 0.958 si:dkey-211g8.6 [Source:ZFIN;Acc:ZDB-GENE-060503-813]
72. si:dkey-69c1.1 ENSDARG00000093426 2 0.958 - - - - - - - - 0.958 si:dkey-69c1.1 [Source:ZFIN;Acc:ZDB-GENE-040724-48]
73. SPEF1 ENSDARG00000022007 44 0.955 - - - - - - 0.955 - - sperm flagellar 1 [Source:HGNC Symbol;Acc:HGNC:15874]
74. sema7a ENSDARG00000078707 70 0.955 - - - - - - 0.955 - - semaphorin 7A [Source:ZFIN;Acc:ZDB-GENE-030131-3633]
75. BX927369.2 BX927369.2 9 0.955 - - - - - - 0.955 - -
76. rnf41l ENSDARG00000073918 329 0.955 - - - - - - 0.955 - - ring finger protein 41, like [Source:ZFIN;Acc:ZDB-GENE-030131-9441]
77. SPAG17 SPAG17 31 0.952 - - - - - - 0.952 - -
78. si:dkey-3d18.4 si:dkey-3d18.4 43 0.952 - - - - - - 0.952 - -
79. CNGB1 CNGB1 40 0.952 - - - - - - 0.952 - -
80. tceb3 40 0.952 - - - - - - 0.952 - - transcription elongation factor B (SIII), polypeptide 3
81. rpl37_1 ENSDARG00000034291, ENSDARG00000076360 365 0.949 - - - - - - 0.949 - - ribosomal protein L37 [Source:ZFIN;Acc:ZDB-GENE-040625-39]
82. BX936386.1 ENSDARG00000097166 5 0.948 - - - - - - - - 0.948
83. il17c ENSDARG00000057180, ENSDARG00000109701 3 0.948 - - - - - - - - 0.948 interleukin 17c [Source:ZFIN;Acc:ZDB-GENE-061031-5]
84. cyth3 cyth3 120 0.945 - - - - - - 0.945 - -
85. sdhda ENSDARG00000055712 50 0.945 - - - - - - 0.945 - - succinate dehydrogenase complex, subunit D, integral membrane protein a [Source:ZFIN;Acc:ZDB-GENE-040718-192]
86. FP102192.1 ENSDARG00000101104 32 0.945 - - - - - - 0.945 - - protein FAM111A-like [Source:NCBI gene;Acc:101886648]
87. trim62 ENSDARG00000060901 12 0.945 - - - - - - - - 0.945 tripartite motif containing 62 [Source:ZFIN;Acc:ZDB-GENE-070112-502]
88. afmid ENSDARG00000099106 166 0.943 - - - - - - 0.943 - - arylformamidase [Source:ZFIN;Acc:ZDB-GENE-050417-166]
89. si:dkey-5n7.2 ENSDARG00000102339 42 0.942 - - - - - - 0.942 - - si:dkey-5n7.2 [Source:ZFIN;Acc:ZDB-GENE-050420-254]
90. ahr1b ENSDARG00000023537 44 0.941 - - - - - - 0.941 - - aryl hydrocarbon receptor 1b [Source:ZFIN;Acc:ZDB-GENE-050922-1]
91. tube1 ENSDARG00000043982, ENSDARG00000096620 96 0.941 - - - - - - 0.941 - - tubulin, epsilon 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1174]
92. CU302326.2 CU302326.2 54 0.939 - - - - - - 0.939 - -
93. znf142 ENSDARG00000061373 47 0.939 - - - - - - 0.939 - - zinc finger protein 142 [Source:ZFIN;Acc:ZDB-GENE-080512-2]
94. HDAC7 HDAC7 12 0.934 - - - - - - 0.934 - -
95. ap4e1 ENSDARG00000103684 171 0.932 - - - - - - 0.932 - - adaptor related protein complex 4 subunit epsilon 1 [Source:ZFIN;Acc:ZDB-GENE-061221-3]
96. ZNF337_24 ZNF337_24 16 0.93 - - - - - - 0.930 - -
97. gys2 ENSDARG00000004904 212 0.93 - - - - - - 0.930 - - glycogen synthase 2 [Source:ZFIN;Acc:ZDB-GENE-030826-31]
98. psme1 ENSDARG00000002165, ENSDARG00000115834 72 0.929 - - - - - - 0.929 - - proteasome activator subunit 1 [Source:ZFIN;Acc:ZDB-GENE-991110-17]
99. zp3a.2 ENSDARG00000042130 163 0.929 - - - - - - 0.929 - - zona pellucida glycoprotein 3a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040727-2]
100. ARSI ARSI 34 0.928 - - - - - - 0.928 - -

There are 293 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA