Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for pdzd11

Gene Name Gene ID Reads Annotation
pdzd11 ENSDARG00000053194, ENSDARG00000116591 1858 PDZ domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-040426-2544]










Genes with expression patterns similar to pdzd11

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pdzd11 ENSDARG00000053194, ENSDARG00000116591 1858 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 PDZ domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-040426-2544]
2. kdm1a ENSDARG00000060679 6152 2.465 0.732 - - - - - 0.747 - 0.986 lysine (K)-specific demethylase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7828]
3. h3f3a 66671 2.234 0.727 - - - - - 0.703 0.804 - H3 histone, family 3A, transcript variant X1
4. fam219ab ENSDARG00000013813 591 2.201 0.764 - - - - - 0.702 0.735 - family with sequence similarity 219, member Ab [Source:ZFIN;Acc:ZDB-GENE-050522-213]
5. acbd6 ENSDARG00000039456 2355 1.88 - - - - - - 0.881 - 0.999 acyl-CoA binding domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-030131-2810]
6. apex1 ENSDARG00000045843 6345 1.801 - - - - - - 0.809 - 0.992 APEX nuclease (multifunctional DNA repair enzyme) 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2761]
7. cnrip1a ENSDARG00000091683 1491 1.762 - - - - - - - 0.763 0.999 cannabinoid receptor interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-126]
8. gltscr1 gltscr1 1487 1.755 - 0.756 - - - - - - 0.999
9. nup155 ENSDARG00000001777 3417 1.739 - 0.740 - - - - - - 0.999 nucleoporin 155 [Source:ZFIN;Acc:ZDB-GENE-040426-711]
10. jam2b ENSDARG00000079071 1031 1.727 - 0.728 - - - - - - 0.999 junctional adhesion molecule 2b [Source:ZFIN;Acc:ZDB-GENE-080229-3]
11. snrpd1 ENSDARG00000011648 8615 1.726 - - - - - - - 0.738 0.988 small nuclear ribonucleoprotein D1 polypeptide [Source:ZFIN;Acc:ZDB-GENE-020419-14]
12. midn ENSDARG00000018524 7559 1.716 - - - - - - - 0.760 0.956 midnolin [Source:ZFIN;Acc:ZDB-GENE-030131-2433]
13. prcc ENSDARG00000063252 2065 1.601 - - - - - - 0.831 0.770 - proline rich mitotic checkpoint control factor [Source:ZFIN;Acc:ZDB-GENE-070717-1]
14. ensaa ENSDARG00000036944 685 1.59 - - - 0.776 - 0.814 - - - endosulfine alpha a [Source:ZFIN;Acc:ZDB-GENE-060503-181]
15. TAF15 ENSDARG00000070019 5102 1.579 - - - - - 0.733 - 0.846 - TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-061215-102]
16. prpf4ba ENSDARG00000008784 936 1.576 0.787 - - - - - - 0.789 - pre-mRNA processing factor 4Ba [Source:ZFIN;Acc:ZDB-GENE-040426-947]
17. PACS1_1 PACS1_1 1264 1.563 - - - - - - 0.702 0.861 -
18. phc2a ENSDARG00000056695, ENSDARG00000110253 1726 1.559 - 0.704 - - - - 0.855 - - polyhomeotic homolog 2a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-020312-1]
19. tsr2 ENSDARG00000005772 1155 1.548 - - - 0.766 - - 0.782 - - TSR2, 20S rRNA accumulation, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-021231-2]
20. actr1 ENSDARG00000011611 3879 1.548 - - - - - 0.707 0.841 - - ARP1 actin related protein 1, centractin [Source:ZFIN;Acc:ZDB-GENE-040426-2695]
21. si:dkey-67c22.2 ENSDARG00000055389 6410 1.546 0.722 - - - - - 0.824 - - si:dkey-67c22.2 [Source:ZFIN;Acc:ZDB-GENE-030131-5845]
22. dctn3 ENSDARG00000041363 3351 1.544 - 0.718 - - - - 0.826 - - dynactin 3 (p22) [Source:ZFIN;Acc:ZDB-GENE-040704-65]
23. foxk2 ENSDARG00000030583 2982 1.542 - - - - - - 0.754 0.788 - forkhead box K2 [Source:ZFIN;Acc:ZDB-GENE-030131-2861]
24. ttc26 ENSDARG00000012039 505 1.54 - - - 0.752 - - 0.788 - - tetratricopeptide repeat domain 26 [Source:ZFIN;Acc:ZDB-GENE-041212-41]
25. ap1s2 ENSDARG00000058504, ENSDARG00000114515 6499 1.538 - - - - - - 0.804 - 0.734 adaptor related protein complex 1 subunit sigma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5448]
26. azin1a ENSDARG00000052789 387 1.53 - - - 0.785 - - 0.745 - - antizyme inhibitor 1a [Source:ZFIN;Acc:ZDB-GENE-050417-20]
27. ptpn5 ENSDARG00000074866 548 1.52 - - - 0.812 - - 0.708 - - protein tyrosine phosphatase, non-receptor type 5 [Source:ZFIN;Acc:ZDB-GENE-101028-3]
28. pcdh19 ENSDARG00000034344 2378 1.509 - - - - - - 0.792 0.717 - protocadherin 19 [Source:ZFIN;Acc:ZDB-GENE-030131-4218]
29. CABZ01111990.1 CABZ01111990.1 4374 1.508 - - - - - - 0.718 0.790 -
30. cbx3a ENSDARG00000003860 4922 1.508 - 0.762 - - - - 0.746 - - chromobox homolog 3a (HP1 gamma homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-1158]
31. adnpa ENSDARG00000062002, ENSDARG00000115617 2009 1.507 - - - - - 0.794 - 0.713 - activity-dependent neuroprotector homeobox a [Source:ZFIN;Acc:ZDB-GENE-061215-112]
32. zgc:109889 ENSDARG00000069600, ENSDARG00000113538 554 1.502 - - - - - - 0.715 0.787 - zgc:109889 [Source:ZFIN;Acc:ZDB-GENE-050522-547]
33. C7H11orf68 C7H11orf68 446 1.501 - - - 0.770 - - - 0.731 -
34. ldb1a ENSDARG00000010137 3035 1.5 - - - - - - 0.732 0.768 - LIM domain binding 1a [Source:ZFIN;Acc:ZDB-GENE-990415-138]
35. VSTM2B VSTM2B 149 1.499 - - - 0.798 - - 0.701 - -
36. bud31 ENSDARG00000017084 3892 1.499 - - - - - 0.729 - 0.770 - BUD31 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040720-3]
37. casp3a ENSDARG00000017905, ENSDARG00000113754 2819 1.494 - 0.719 - - - - - 0.775 - caspase 3, apoptosis-related cysteine peptidase a [Source:ZFIN;Acc:ZDB-GENE-011210-1]
38. ubr5 ENSDARG00000018192 9267 1.493 - - - - - - 0.754 0.739 - ubiquitin protein ligase E3 component n-recognin 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6559]
39. si:ch211-197h24.6 ENSDARG00000091631 1933 1.486 - 0.784 - - - - - 0.702 - si:ch211-197h24.6 [Source:ZFIN;Acc:ZDB-GENE-030131-1361]
40. wdr33 ENSDARG00000018272 4076 1.475 - 0.767 - 0.708 - - - - - WD repeat domain 33 [Source:ZFIN;Acc:ZDB-GENE-040924-3]
41. gstz1 ENSDARG00000027984 278 1.474 - - - 0.731 - 0.743 - - - glutathione S-transferase zeta 1 [Source:ZFIN;Acc:ZDB-GENE-040718-184]
42. anapc13 ENSDARG00000078435 996 1.467 - - - - - - 0.707 0.760 - anaphase promoting complex subunit 13 [Source:ZFIN;Acc:ZDB-GENE-091204-298]
43. ttc39c ENSDARG00000102308, ENSDARG00000115554 748 1.461 0.701 - - - - - 0.760 - - tetratricopeptide repeat domain 39C [Source:ZFIN;Acc:ZDB-GENE-050522-194]
44. si:ch73-299h12.3 ENSDARG00000101790 590 1.451 - - - 0.742 - - - 0.709 - si:ch73-299h12.3 [Source:ZFIN;Acc:ZDB-GENE-081031-93]
45. vldlr ENSDARG00000006257 772 1.446 - 0.722 - - - - - 0.724 - very low density lipoprotein receptor [Source:ZFIN;Acc:ZDB-GENE-040426-803]
46. tiprl ENSDARG00000032353 1045 1.436 - - - - 0.734 - 0.702 - - TIP41, TOR signaling pathway regulator-like (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1611]
47. ccdc28b ENSDARG00000011222 528 1.427 - - - - - - 0.700 0.727 - coiled-coil domain containing 28B [Source:ZFIN;Acc:ZDB-GENE-060208-3]
48. SSBP4 ENSDARG00000056483 5156 1.422 0.711 - - - - - 0.711 - - single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
49. dcp2 ENSDARG00000104242 401 1.417 - - - - - - 0.713 0.704 - decapping mRNA 2 [Source:ZFIN;Acc:ZDB-GENE-040426-851]
50. FAM109B FAM109B 470 1.415 - 0.711 - 0.704 - - - - -
51. msi1 ENSDARG00000010710 2634 1.409 0.705 - - - - - 0.704 - - musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
52. tardbp ENSDARG00000040031, ENSDARG00000115667 13815 1.403 - - - - - - 0.702 0.701 - TAR DNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-3777]
53. TRIM65 ENSDARG00000077098 991 0.999 - - - - - - - - 0.999 tripartite motif containing 65 [Source:ZFIN;Acc:ZDB-GENE-130613-1]
54. depdc1a ENSDARG00000018165, ENSDARG00000114097 1958 0.999 - - - - - - - - 0.999 DEP domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9827]
55. cdk5r1b ENSDARG00000045087 2075 0.999 - - - - - - - - 0.999 cyclin-dependent kinase 5, regulatory subunit 1b (p35) [Source:ZFIN;Acc:ZDB-GENE-040718-220]
56. SPDL1 ENSDARG00000103996, ENSDARG00000109617 1473 0.999 - - - - - - - - 0.999 spindle apparatus coiled-coil protein 1 [Source:ZFIN;Acc:ZDB-GENE-070928-7]
57. gata3 ENSDARG00000016526 1857 0.999 - - - - - - - - 0.999 GATA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-990415-82]
58. hddc3 ENSDARG00000020473 2814 0.999 - - - - - - - - 0.999 HD domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050417-377]
59. NRD1 NRD1 3486 0.999 - - - - - - - - 0.999
60. zgc:162967 zgc:162967 2132 0.999 - - - - - - - - 0.999
61. tmed7 ENSDARG00000046022 2435 0.999 - - - - - - - - 0.999 transmembrane p24 trafficking protein 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2570]
62. agpat9 agpat9 938 0.999 - - - - - - - - 0.999
63. jam3a ENSDARG00000114589 630 0.999 - - - - - - - - 0.999 junctional adhesion molecule 3a [Source:ZFIN;Acc:ZDB-GENE-070424-177]
64. smyd5 ENSDARG00000071669 1194 0.999 - - - - - - - - 0.999 SMYD family member 5 [Source:ZFIN;Acc:ZDB-GENE-040912-39]
65. mmgt1 ENSDARG00000010553, ENSDARG00000109407 2992 0.999 - - - - - - - - 0.999 membrane magnesium transporter 1 [Source:ZFIN;Acc:ZDB-GENE-040801-65]
66. prpf39 ENSDARG00000100209 3721 0.999 - - - - - - - - 0.999 PRP39 pre-mRNA processing factor 39 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030616-420]
67. foxp2 ENSDARG00000005453 1504 0.999 - - - - - - - - 0.999 forkhead box P2 [Source:ZFIN;Acc:ZDB-GENE-041203-2]
68. spag1a ENSDARG00000004017 1140 0.999 - - - - - - - - 0.999 sperm associated antigen 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9443]
69. NDST1 NDST1 1584 0.999 - - - - - - - - 0.999
70. C24H7orf50 1417 0.999 - - - - - - - - 0.999 chromosome 24 C7orf50 homolog, transcript variant X2
71. nicn1 ENSDARG00000069677, ENSDARG00000116330 790 0.999 - - - - - - - - 0.999 nicolin 1 [Source:ZFIN;Acc:ZDB-GENE-040801-129]
72. akr1a1b ENSDARG00000052030, ENSDARG00000112549 2505 0.999 - - - - - - - - 0.999 aldo-keto reductase family 1, member A1b (aldehyde reductase) [Source:ZFIN;Acc:ZDB-GENE-050417-118]
73. tsen2 ENSDARG00000091851 1467 0.999 - - - - - - - - 0.999 TSEN2 tRNA splicing endonuclease subunit [Source:ZFIN;Acc:ZDB-GENE-060929-918]
74. ash1l ENSDARG00000070981 2520 0.998 - - - - - - - - 0.998 ash1 (absent, small, or homeotic)-like (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-6101]
75. BX957337.1 BX957337.1 1685 0.998 - - - - - - - - 0.998
76. mtmr9 ENSDARG00000015860 1339 0.998 - - - - - - - - 0.998 myotubularin related protein 9 [Source:ZFIN;Acc:ZDB-GENE-040724-223]
77. cpm ENSDARG00000011769, ENSDARG00000113736 1113 0.998 - - - - - - - - 0.998 carboxypeptidase M [Source:ZFIN;Acc:ZDB-GENE-041210-191]
78. vsnl1a ENSDARG00000023228 1584 0.998 - - - - - - - - 0.998 visinin-like 1a [Source:ZFIN;Acc:ZDB-GENE-041001-211]
79. nup98 ENSDARG00000074955 3998 0.998 - - - - - - - - 0.998 nucleoporin 98 [Source:ZFIN;Acc:ZDB-GENE-040426-1180]
80. BX296557.2 BX296557.2 1083 0.998 - - - - - - - - 0.998
81. kbtbd12 ENSDARG00000001882 1196 0.998 - - - - - - - - 0.998 kelch repeat and BTB (POZ) domain containing 12 [Source:ZFIN;Acc:ZDB-GENE-050904-1]
82. serpinb1 ENSDARG00000055416 1320 0.998 - - - - - - - - 0.998 serpin peptidase inhibitor, clade B (ovalbumin), member 1 [Source:ZFIN;Acc:ZDB-GENE-040718-400]
83. polr3k ENSDARG00000037835 1552 0.998 - - - - - - - - 0.998 polymerase (RNA) III (DNA directed) polypeptide K [Source:ZFIN;Acc:ZDB-GENE-040718-291]
84. ceacam1 ENSDARG00000041119, ENSDARG00000111374 1763 0.998 - - - - - - - - 0.998 carcinoembryonic antigen-related cell adhesion molecule 1 [Source:ZFIN;Acc:ZDB-GENE-010724-14]
85. ubl3a ENSDARG00000099532, ENSDARG00000113955 3475 0.997 - - - - - - - - 0.997 ubiquitin-like 3a [Source:ZFIN;Acc:ZDB-GENE-030131-3431]
86. ubqln4 ENSDARG00000052975 6453 0.997 - - - - - - - - 0.997 ubiquilin 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6269]
87. BAZ2B BAZ2B 3285 0.996 - - - - - - - - 0.996
88. mier1b ENSDARG00000001447 1680 0.995 - - - - - - - - 0.995 mesoderm induction early response 1b, transcriptional regulator [Source:ZFIN;Acc:ZDB-GENE-070705-170]
89. naa15a ENSDARG00000003213 5889 0.995 - - - - - - - - 0.995 N(alpha)-acetyltransferase 15, NatA auxiliary subunit a [Source:ZFIN;Acc:ZDB-GENE-030131-2392]
90. rnf115 ENSDARG00000062450 1284 0.995 - - - - - - - - 0.995 ring finger protein 115 [Source:ZFIN;Acc:ZDB-GENE-061215-82]
91. stip1 ENSDARG00000004906 7742 0.995 - - - - - - - - 0.995 stress-induced phosphoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-041121-17]
92. igfbp5b ENSDARG00000025348 3803 0.994 - - - - - - - - 0.994 insulin-like growth factor binding protein 5b [Source:ZFIN;Acc:ZDB-GENE-040319-2]
93. eya2 ENSDARG00000018984 1768 0.994 - - - - - - - - 0.994 EYA transcriptional coactivator and phosphatase 2 [Source:ZFIN;Acc:ZDB-GENE-040912-24]
94. ndufa2 ENSDARG00000021984 4754 0.994 - - - - - - - - 0.994 NADH:ubiquinone oxidoreductase subunit A2 [Source:ZFIN;Acc:ZDB-GENE-050522-377]
95. vta1 ENSDARG00000013732 6072 0.992 - - - - - - - - 0.992 vesicle (multivesicular body) trafficking 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2154]
96. zgc:195001 ENSDARG00000070484 3281 0.991 - - - - - - - - 0.991 zgc:195001 [Source:ZFIN;Acc:ZDB-GENE-081022-173]
97. C1QBP ENSDARG00000039887 11186 0.991 - - - - - - - - 0.991 complement component 1, q subcomponent binding protein [Source:ZFIN;Acc:ZDB-GENE-050417-408]
98. sec61g ENSDARG00000018637, ENSDARG00000117172 4899 0.99 - - - - - - - - 0.990 Sec61 translocon gamma subunit [Source:ZFIN;Acc:ZDB-GENE-040718-203]
99. nid1a ENSDARG00000068710 3948 0.99 - - - - - - - - 0.990 nidogen 1a [Source:ZFIN;Acc:ZDB-GENE-050302-58]
100. atp5mf ENSDARG00000037867 11052 0.99 - - - - - - - - 0.990 ATP synthase membrane subunit f [Source:ZFIN;Acc:ZDB-GENE-050309-87]

There are 880 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA