Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for pdxdc1

Gene Name Gene ID Reads Annotation
pdxdc1 ENSDARG00000101886 1958 pyridoxal-dependent decarboxylase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040912-16]










Genes with expression patterns similar to pdxdc1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pdxdc1 ENSDARG00000101886 1958 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 pyridoxal-dependent decarboxylase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040912-16]
2. rac2 ENSDARG00000038010 5837 2.537 - - - - - 0.893 0.819 - 0.825 Rac family small GTPase 2 [Source:ZFIN;Acc:ZDB-GENE-040625-27]
3. CU915738.1 CU915738.1 3723 2.412 - - - - - 0.825 0.741 0.846 -
4. PLEKHA6 ENSDARG00000020328 2076 2.402 - - - - - 0.720 0.775 0.907 - pleckstrin homology domain containing, family A member 6 [Source:ZFIN;Acc:ZDB-GENE-140106-14]
5. zgc:153284 ENSDARG00000036876, ENSDARG00000109673 3507 2.373 - 0.746 - - - 0.751 0.876 - - zgc:153284 [Source:ZFIN;Acc:ZDB-GENE-060825-317]
6. piezo1 ENSDARG00000076870 4704 2.368 - - - - - 0.738 0.737 - 0.893 piezo-type mechanosensitive ion channel component 1 [Source:ZFIN;Acc:ZDB-GENE-041111-255]
7. tmem238 tmem238 1403 2.327 - 0.768 - - - 0.766 0.793 - -
8. C21H5orf15 C21H5orf15 2318 2.246 - - - - 0.707 - 0.816 - 0.723
9. pef1 ENSDARG00000023989 3013 2.241 - - - - - 0.819 0.706 - 0.716 penta-EF-hand domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040801-259]
10. si:dkey-193b15.6 si:dkey-193b15.6 1340 1.787 - - - - - 0.810 - 0.977 -
11. ajuba ENSDARG00000077842 1152 1.784 - - - - - 0.836 0.948 - - ajuba LIM protein [Source:ZFIN;Acc:ZDB-GENE-030131-9341]
12. coro7 ENSDARG00000089616 2141 1.783 - - - - - - - 0.928 0.855 coronin 7 [Source:ZFIN;Acc:ZDB-GENE-050706-137]
13. CCDC167 ENSDARG00000045850 1024 1.747 - - - - - - - 0.926 0.821 coiled-coil domain containing 167 [Source:ZFIN;Acc:ZDB-GENE-041210-79]
14. si:dkey-56e3.2 ENSDARG00000092551 835 1.746 - - - - - - 0.773 0.973 - si:dkey-56e3.2 [Source:ZFIN;Acc:ZDB-GENE-090313-316]
15. cbsb ENSDARG00000010946 5779 1.742 - - - - - - - 0.860 0.882 cystathionine-beta-synthase b [Source:ZFIN;Acc:ZDB-GENE-021030-3]
16. nudt17 ENSDARG00000008014 479 1.724 - - - - - - 0.796 0.928 - nudix (nucleoside diphosphate linked moiety X)-type motif 17 [Source:ZFIN;Acc:ZDB-GENE-050913-50]
17. fam49ba ENSDARG00000020929 1980 1.718 - - - - - - 0.890 - 0.828 family with sequence similarity 49, member Ba [Source:ZFIN;Acc:ZDB-GENE-030131-9537]
18. arpc5a ENSDARG00000039142 5482 1.716 - - - - - 0.765 - 0.951 - actin related protein 2/3 complex, subunit 5A [Source:ZFIN;Acc:ZDB-GENE-030131-8448]
19. capn2b ENSDARG00000055592 5431 1.709 - - - - - - 0.863 0.846 - calpain 2, (m/II) large subunit b [Source:ZFIN;Acc:ZDB-GENE-050522-84]
20. AIFM2 ENSDARG00000077549 1419 1.706 - - - - - - 0.732 0.974 - apoptosis-inducing factor, mitochondrion-associated, 2 [Source:ZFIN;Acc:ZDB-GENE-050506-76]
21. si:ch211-226m16.2 ENSDARG00000036785 2163 1.705 - - - - - - - 0.879 0.826 si:ch211-226m16.2 [Source:ZFIN;Acc:ZDB-GENE-030131-2302]
22. znf185 ENSDARG00000103917 7195 1.705 - - - - - 0.876 - 0.829 - zinc finger protein 185 with LIM domain [Source:ZFIN;Acc:ZDB-GENE-061103-355]
23. rgs12b ENSDARG00000036774 5088 1.704 - - - - - - 0.776 0.928 - regulator of G protein signaling 12b [Source:ZFIN;Acc:ZDB-GENE-031006-13]
24. bcar1 ENSDARG00000056525 6563 1.702 - - - - - 0.799 - 0.903 - BCAR1, Cas family scaffold protein [Source:ZFIN;Acc:ZDB-GENE-030131-2774]
25. ezrb ENSDARG00000025091 2861 1.696 - - - - - 0.852 0.844 - - ezrin b [Source:ZFIN;Acc:ZDB-GENE-050803-1]
26. BDP1 BDP1 2514 1.694 - - - - - - - 0.952 0.742
27. rabac1 ENSDARG00000004171 2708 1.693 - - - - - - 0.768 0.925 - Rab acceptor 1 (prenylated) [Source:ZFIN;Acc:ZDB-GENE-040625-146]
28. paqr3a ENSDARG00000017703, ENSDARG00000117061 2018 1.691 - - - - - - 0.744 0.947 - progestin and adipoQ receptor family member IIIa [Source:ZFIN;Acc:ZDB-GENE-040426-1667]
29. CABZ01073405.1 CABZ01073405.1 275 1.687 - - - - - - 0.735 0.952 -
30. rps6ka3a ENSDARG00000035556, ENSDARG00000116641 3608 1.686 0.868 - - - - - - - 0.818 ribosomal protein S6 kinase a, polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-030219-119]
31. ost4 ENSDARG00000096118 7679 1.685 - - - - - - 0.928 0.757 - oligosaccharyltransferase complex subunit 4 (non-catalytic) [Source:ZFIN;Acc:ZDB-GENE-110307-1]
32. gpsm2 ENSDARG00000017311, ENSDARG00000113810 1001 1.684 - - - - - - 0.830 - 0.854 G protein signaling modulator 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1169]
33. tfap2c ENSDARG00000040606 4628 1.677 - - - - - - 0.772 0.905 - transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma) [Source:ZFIN;Acc:ZDB-GENE-041212-61]
34. MGST1 MGST1 1958 1.656 - - - - - 0.756 0.900 - -
35. and3 ENSDARG00000056873 22650 1.653 - - - - - - 0.864 0.789 - actinodin3 [Source:ZFIN;Acc:ZDB-GENE-040724-185]
36. eppk1 ENSDARG00000096359 4315 1.647 - - - - - 0.804 0.843 - - epiplakin 1 [Source:ZFIN;Acc:ZDB-GENE-030416-1]
37. prkcsh ENSDARG00000004470 1424 1.645 - - - - - - - 0.914 0.731 protein kinase C substrate 80K-H [Source:ZFIN;Acc:ZDB-GENE-040426-770]
38. tom1 ENSDARG00000104581 1457 1.644 - - - - - - 0.716 0.928 - target of myb1 membrane trafficking protein [Source:ZFIN;Acc:ZDB-GENE-060721-1]
39. CABZ01057013.1 CABZ01057013.1 1308 1.638 - - - - - 0.758 - 0.880 -
40. prdx6 ENSDARG00000043511, ENSDARG00000116085 3456 1.634 - - - - - 0.811 - 0.823 - peroxiredoxin 6 [Source:ZFIN;Acc:ZDB-GENE-040426-1778]
41. slc39a7 ENSDARG00000104451 6368 1.634 - - - - - 0.742 - 0.892 - solute carrier family 39 (zinc transporter), member 7 [Source:ZFIN;Acc:ZDB-GENE-991110-20]
42. cmasb 499 1.632 - - - - - 0.703 0.929 - - cytidine monophosphate N-acetylneuraminic acid synthetase b
43. TPMT TPMT 138 1.626 - - - - - - 0.823 - 0.803
44. CABZ01007794.1 CABZ01007794.1 14290 1.625 - 0.729 - - - - 0.896 - -
45. cuedc1b ENSDARG00000054748 1638 1.624 - - - - - - - 0.872 0.752 CUE domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-070424-29]
46. pacs1a ENSDARG00000044556, ENSDARG00000117043 914 1.62 - - - - - - 0.777 - 0.843 phosphofurin acidic cluster sorting protein 1a [Source:ZFIN;Acc:ZDB-GENE-050208-244]
47. si:ch211-11k18.4 ENSDARG00000087869 3298 1.618 - - - - - 0.718 - 0.900 - si:ch211-11k18.4 [Source:ZFIN;Acc:ZDB-GENE-070912-22]
48. s100u ENSDARG00000071014 4754 1.615 - - - - - 0.833 0.782 - - S100 calcium binding protein U [Source:ZFIN;Acc:ZDB-GENE-030131-3121]
49. traf4a ENSDARG00000003963, ENSDARG00000109586 1595 1.612 - 0.797 - - - - - - 0.815 tnf receptor-associated factor 4a [Source:ZFIN;Acc:ZDB-GENE-040308-1]
50. mpzl2b ENSDARG00000027345, ENSDARG00000113465 575 1.611 - - - - - 0.755 0.856 - - myelin protein zero-like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-8774]
51. eps8l1 1598 1.607 - - - - - - 0.719 0.888 - eps8-like1, transcript variant X3
52. mtpn ENSDARG00000104018 4264 1.6 - - - - - - 0.711 0.889 - myotrophin [Source:ZFIN;Acc:ZDB-GENE-040426-2166]
53. gmppab ENSDARG00000023498 1272 1.598 - - - - - 0.809 0.789 - - GDP-mannose pyrophosphorylase Ab [Source:ZFIN;Acc:ZDB-GENE-040426-1550]
54. cx30.3 ENSDARG00000042707, ENSDARG00000116331 2399 1.594 - - - - - 0.741 0.853 - - connexin 30.3 [Source:ZFIN;Acc:ZDB-GENE-040406-1]
55. ppl ENSDARG00000101043 9196 1.588 0.714 - - - - 0.874 - - - periplakin [Source:ZFIN;Acc:ZDB-GENE-041008-196]
56. padi2 ENSDARG00000044167 6765 1.585 - - - - - - 0.807 0.778 - peptidyl arginine deiminase, type II [Source:ZFIN;Acc:ZDB-GENE-031116-67]
57. cldne ENSDARG00000043128 6960 1.585 - - - - - - 0.785 0.800 - claudin e [Source:ZFIN;Acc:ZDB-GENE-010328-5]
58. anxa3a ENSDARG00000009196, ENSDARG00000112919 2143 1.585 - - - - - 0.768 0.817 - - annexin A3a [Source:ZFIN;Acc:ZDB-GENE-040912-58]
59. FUZ ENSDARG00000079730 821 1.583 - - - - - - 0.796 - 0.787 fuzzy planar cell polarity protein [Source:ZFIN;Acc:ZDB-GENE-090609-2]
60. SGTA ENSDARG00000019941 2959 1.583 - 0.746 - - - - - - 0.837 small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha [Source:ZFIN;Acc:ZDB-GENE-030131-8811]
61. prelid1a ENSDARG00000098671 4745 1.58 - - - - - - 0.703 0.877 - PRELI domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1341]
62. fras1 ENSDARG00000054619, ENSDARG00000114204 4459 1.575 - - - - - - 0.807 0.768 - Fraser extracellular matrix complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-060526-68]
63. sc:d173 sc:d173 1279 1.574 0.852 - - - - 0.722 - - -
64. itpk1 itpk1 425 1.569 - - - - 0.712 - 0.857 - -
65. phlda2 ENSDARG00000042874, ENSDARG00000114844 3876 1.564 - - - - - 0.725 - - 0.839 pleckstrin homology-like domain, family A, member 2 [Source:ZFIN;Acc:ZDB-GENE-050522-73]
66. grhl3 ENSDARG00000078552 897 1.56 - - - - - - 0.792 - 0.768 grainyhead-like transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9854]
67. rrbp1a ENSDARG00000013763 4723 1.557 - - - - - 0.739 - 0.818 - ribosome binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9795]
68. rab11al ENSDARG00000014340 2116 1.553 0.777 - - - - 0.776 - - - RAB11a, member RAS oncogene family, like [Source:ZFIN;Acc:ZDB-GENE-031118-188]
69. tradd ENSDARG00000036057, ENSDARG00000117083 1583 1.553 - - - - - - 0.767 - 0.786 tnfrsf1a-associated via death domain [Source:ZFIN;Acc:ZDB-GENE-000511-5]
70. slc43a1a ENSDARG00000037393, ENSDARG00000113118 5797 1.551 - - - - - 0.718 - 0.833 - solute carrier family 43 (amino acid system L transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-030131-6327]
71. si:ch73-91k6.2 ENSDARG00000091598 727 1.55 - - - - - - 0.771 - 0.779 si:ch73-91k6.2 [Source:ZFIN;Acc:ZDB-GENE-050208-270]
72. ppp1cc 2361 1.548 - - - - - - 0.706 0.842 - protein phosphatase 1, catalytic subunit, gamma isozyme
73. npc1 ENSDARG00000017180 3724 1.545 0.702 - - - - - - 0.843 - Niemann-Pick disease, type C1 [Source:ZFIN;Acc:ZDB-GENE-030131-3161]
74. si:dkeyp-86h10.3 ENSDARG00000095615 253 1.536 0.704 - - - - - 0.832 - - si:dkeyp-86h10.3 [Source:ZFIN;Acc:ZDB-GENE-100922-65]
75. abca12 ENSDARG00000074749 2712 1.532 - 0.712 - - - - 0.820 - - ATP-binding cassette, sub-family A (ABC1), member 12 [Source:ZFIN;Acc:ZDB-GENE-030131-9790]
76. nrip1b ENSDARG00000068894 2699 1.528 - - - - - 0.755 0.773 - - nuclear receptor interacting protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4173]
77. stam2 ENSDARG00000005318 2980 1.526 0.713 - - - - - - - 0.813 signal transducing adaptor molecule (SH3 domain and ITAM motif) 2 [Source:ZFIN;Acc:ZDB-GENE-041114-64]
78. asb13b ENSDARG00000089833 251 1.525 0.730 - - - - - - - 0.795 ankyrin repeat and SOCS box containing 13b [Source:ZFIN;Acc:ZDB-GENE-091118-116]
79. CABZ01008011.1 CABZ01008011.1 761 1.525 - - - - - 0.738 - - 0.787
80. chmp2bb ENSDARG00000002190 4629 1.524 - - - - - - - 0.745 0.779 charged multivesicular body protein 2Bb [Source:ZFIN;Acc:ZDB-GENE-040426-2539]
81. imp4 ENSDARG00000054540 1396 1.517 - - - - - - 0.731 - 0.786 IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-474]
82. ufc1 ENSDARG00000022340 2618 1.517 - - - - - 0.732 0.785 - - ubiquitin-fold modifier conjugating enzyme 1 [Source:ZFIN;Acc:ZDB-GENE-040801-268]
83. atrip ENSDARG00000063076 385 1.516 - - - - - - 0.739 - 0.777 ATR interacting protein [Source:ZFIN;Acc:ZDB-GENE-050208-331]
84. brd8 ENSDARG00000025071 2605 1.515 - - - - - - - 0.704 0.811 bromodomain containing 8 [Source:ZFIN;Acc:ZDB-GENE-030722-10]
85. itm2bb ENSDARG00000041505 2734 1.514 - - - - - 0.766 - 0.748 - integral membrane protein 2Bb [Source:ZFIN;Acc:ZDB-GENE-040426-2139]
86. ralgps2 ENSDARG00000026519 1610 1.512 - - - - - - 0.759 - 0.753 Ral GEF with PH domain and SH3 binding motif 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1212]
87. smarcd2 ENSDARG00000088877 416 1.503 0.720 - - - - - - - 0.783 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 [Source:ZFIN;Acc:ZDB-GENE-080215-1]
88. lamtor3 ENSDARG00000057075 2282 1.502 0.705 0.797 - - - - - - - late endosomal/lysosomal adaptor, MAPK and MTOR activator 3 [Source:ZFIN;Acc:ZDB-GENE-050522-345]
89. NID2 NID2 5282 1.5 - - - - - 0.797 0.703 - -
90. myeov2 3351 1.499 - - - - - 0.791 0.708 - - myeloma overexpressed 2
91. vimp 4034 1.498 0.700 - - - - 0.798 - - - VCP-interacting membrane selenoprotein
92. ddx39aa ENSDARG00000006225, ENSDARG00000116665 6675 1.497 - 0.712 - - - - - 0.785 - DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Aa [Source:ZFIN;Acc:ZDB-GENE-030131-4275]
93. FAM3D ENSDARG00000091625 1392 1.496 0.742 - - - - - 0.754 - - family with sequence similarity 3 member D [Source:HGNC Symbol;Acc:HGNC:18665]
94. lamb1b ENSDARG00000045524, ENSDARG00000116025 613 1.495 - - - - - - 0.729 - 0.766 laminin, beta 1b [Source:ZFIN;Acc:ZDB-GENE-041210-197]
95. capn9 ENSDARG00000012341 12911 1.494 0.783 - - - - - - 0.711 - calpain 9 [Source:ZFIN;Acc:ZDB-GENE-010724-2]
96. zgc:109868 zgc:109868 7474 1.494 - - - - - - 0.726 - 0.768
97. efhd2 ENSDARG00000055759 7777 1.493 - 0.726 - - - 0.767 - - - EF-hand domain family, member D2 [Source:ZFIN;Acc:ZDB-GENE-060531-152]
98. prpf6 ENSDARG00000091367 1868 1.489 - 0.755 - - - - - - 0.734 PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-2575]
99. xiap ENSDARG00000016143, ENSDARG00000110199 621 1.484 0.750 - - - - - 0.734 - - X-linked inhibitor of apoptosis [Source:ZFIN;Acc:ZDB-GENE-030825-7]
100. hsp90b1 ENSDARG00000003570, ENSDARG00000114206 5097 1.478 0.724 - - - - - - - 0.754 heat shock protein 90, beta (grp94), member 1 [Source:ZFIN;Acc:ZDB-GENE-031002-1]

There are 1485 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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