Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for pdx1

Gene Name Gene ID Reads Annotation
pdx1 ENSDARG00000002779, ENSDARG00000109275 28 pancreatic and duodenal homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-990415-122]










Genes with expression patterns similar to pdx1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pdx1 ENSDARG00000002779, ENSDARG00000109275 28 7 - 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 pancreatic and duodenal homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-990415-122]
2. gcgb ENSDARG00000040907 182 3.569 - 0.910 - - 0.911 - - 0.787 0.961 glucagon b [Source:ZFIN;Acc:ZDB-GENE-040712-2]
3. sst2 ENSDARG00000014190 617 2.662 - - - - 0.968 - - 0.749 0.945 somatostatin 2 [Source:ZFIN;Acc:ZDB-GENE-010219-2]
4. BX682234.1 ENSDARG00000074732 5 2.403 - 0.910 - 0.712 0.781 - - - - C-type lectin domain family 12 member B-like [Source:NCBI gene;Acc:101882781]
5. si:dkey-162h11.3 41 1.983 - - - - - 1.000 - - 0.983 si:dkey-162h11.3, transcript variant X2
6. pappab ENSDARG00000059858 11 1.906 - - - - 0.906 1.000 - - - pregnancy-associated plasma protein A, pappalysin 1b [Source:ZFIN;Acc:ZDB-GENE-060526-71]
7. SLC5A10 ENSDARG00000074212 11 1.856 - - - - 0.905 - - 0.951 - solute carrier family 5 member 10 [Source:HGNC Symbol;Acc:HGNC:23155]
8. pax6l pax6l 54 1.836 - 1.000 0.836 - - - - - -
9. crygm2d13 ENSDARG00000057460 1093 1.832 - - 0.832 - - 1.000 - - - crystallin, gamma M2d13 [Source:ZFIN;Acc:ZDB-GENE-040718-105]
10. abch1 ENSDARG00000071341 1 1.818 - - - - - 1.000 - 0.818 - ATP-binding cassette, sub-family H, member 1 [Source:ZFIN;Acc:ZDB-GENE-050517-42]
11. CR790368.1 ENSDARG00000100936 20 1.804 - 0.910 - - 0.894 - - - - uncharacterized LOC110440102 [Source:NCBI gene;Acc:110440102]
12. zgc:174700 zgc:174700 35 1.79 - 0.979 - - - 0.811 - - -
13. cyp2p6 ENSDARG00000042978 46 1.782 - 0.899 - - - 0.883 - - - cytochrome P450, family 2, subfamily P, polypeptide 6 [Source:ZFIN;Acc:ZDB-GENE-040426-790]
14. cyp1b1 ENSDARG00000068934, ENSDARG00000113835 196 1.767 - - 0.767 - - 1.000 - - - cytochrome P450, family 1, subfamily B, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030902-1]
15. BX323876.2 ENSDARG00000104577 62 1.758 - 0.896 - - 0.862 - - - -
16. EPB41L2 ENSDARG00000093374 7 1.747 - - 0.747 - - 1.000 - - - erythrocyte membrane protein band 4.1 like 2 [Source:HGNC Symbol;Acc:HGNC:3379]
17. BX571880.1 ENSDARG00000097533 499 1.744 - - - - - - - 0.798 0.946
18. gcga ENSDARG00000079296 70 1.741 - - - - - - - 0.858 0.883 glucagon a [Source:ZFIN;Acc:ZDB-GENE-010219-1]
19. kif13bb ENSDARG00000073859 7 1.736 - - - 0.736 - 1.000 - - - kinesin family member 13Bb [Source:ZFIN;Acc:ZDB-GENE-090908-5]
20. VSIG10L ENSDARG00000089237 12 1.732 - - - - - 1.000 - 0.732 - V-set and immunoglobulin domain containing 10 like [Source:ZFIN;Acc:ZDB-GENE-131127-231]
21. ins ENSDARG00000035350, ENSDARG00000116735 317 1.731 - - - - 0.976 - - - 0.755 preproinsulin [Source:ZFIN;Acc:ZDB-GENE-980526-110]
22. tmem232 ENSDARG00000067646 4 1.728 - 0.910 - - - - - 0.818 - transmembrane protein 232 [Source:ZFIN;Acc:ZDB-GENE-070705-434]
23. ghrl ENSDARG00000054239 4 1.723 - - - - 0.905 - - 0.818 - ghrelin/obestatin prepropeptide [Source:ZFIN;Acc:ZDB-GENE-070622-2]
24. crygn2 ENSDARG00000030411 2551 1.713 - - 0.713 - - 1.000 - - - crystallin, gamma N2 [Source:ZFIN;Acc:ZDB-GENE-040801-16]
25. ucn3l ENSDARG00000087241 29 1.696 - 0.931 - - - - - - 0.765 urocortin 3, like [Source:ZFIN;Acc:ZDB-GENE-060130-250]
26. twf2b ENSDARG00000009727, ENSDARG00000112161 49 1.674 - 0.910 - - 0.764 - - - - twinfilin actin-binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-050522-238]
27. cyp3c4 ENSDARG00000070021 95 1.665 - 0.932 - - - 0.733 - - - cytochrome P450, family 3, subfamily C, polypeptide 4 [Source:ZFIN;Acc:ZDB-GENE-060929-96]
28. nmba ENSDARG00000068144 9 1.627 - - 0.766 - 0.861 - - - - neuromedin Ba [Source:ZFIN;Acc:ZDB-GENE-050419-3]
29. si:dkey-233e3.4 si:dkey-233e3.4 3 1.62 - - 0.715 - 0.905 - - - -
30. baxa_1 ENSDARG00000020623, ENSDARG00000089129 9 1.61 - 0.910 - - 0.700 - - - - BCL2 associated X, apoptosis regulator a [Source:ZFIN;Acc:ZDB-GENE-000511-6]
31. mxtx1 ENSDARG00000069382 32 1.578 - 0.760 - - - - - 0.818 - mix-type homeobox gene 1 [Source:ZFIN;Acc:ZDB-GENE-000710-7]
32. SLC26A3 SLC26A3 8 1.554 - - - 0.736 - - - 0.818 -
33. pax4 ENSDARG00000021336 29 1.544 - - - - - - - 0.761 0.783 paired box 4 [Source:ZFIN;Acc:ZDB-GENE-041210-244]
34. grap2a ENSDARG00000006468 70 1.543 - 0.779 - - - 0.764 - - - GRB2 related adaptor protein 2a [Source:ZFIN;Acc:ZDB-GENE-050417-275]
35. si:rp71-81e14.2 ENSDARG00000103077, ENSDARG00000109312 8 1.534 - - - 0.708 - 0.826 - - - si:rp71-81e14.2 [Source:ZFIN;Acc:ZDB-GENE-060503-95]
36. irgf3 ENSDARG00000062820 20 1.517 - - - 0.736 0.781 - - - - immunity-related GTPase family, f3 [Source:ZFIN;Acc:ZDB-GENE-051212-6]
37. HRASLS ENSDARG00000100021 16 1.473 - 0.737 - 0.736 - - - - - HRAS-like suppressor [Source:ZFIN;Acc:ZDB-GENE-040718-330]
38. arhgap31 ENSDARG00000059472 23 1.445 - - - - 0.727 0.718 - - - Rho GTPase activating protein 31 [Source:ZFIN;Acc:ZDB-GENE-100922-256]
39. ccr12.2 ccr12.2 2 1 - - - - - 1.000 - - -
40. si:ch211-222b21.5 si:ch211-222b21.5 10 1 - - - - - 1.000 - - -
41. zgc:174862 ENSDARG00000077571 201 1 - - - - - 1.000 - - - zgc:174862 [Source:ZFIN;Acc:ZDB-GENE-080303-29]
42. igfbp6b ENSDARG00000090833 37 1 - - - - - 1.000 - - - insulin-like growth factor binding protein 6b [Source:ZFIN;Acc:ZDB-GENE-090521-2]
43. PCOLCE PCOLCE 25 1 - - - - - 1.000 - - -
44. BX511006.2 BX511006.2 29 1 - - - - - 1.000 - - -
45. slc23a3 ENSDARG00000088891 47 1 - - - - - 1.000 - - - solute carrier family 23, member 3 [Source:ZFIN;Acc:ZDB-GENE-070912-714]
46. abl2 ENSDARG00000013841 145 1 - - - - - 1.000 - - - c-abl oncogene 2, non-receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-020809-2]
47. lctla ENSDARG00000036139, ENSDARG00000116316 32 1 - - - - - 1.000 - - - lactase-like a [Source:ZFIN;Acc:ZDB-GENE-040718-233]
48. klc1a ENSDARG00000009796 10 1 - - - - - 1.000 - - - kinesin light chain 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1599]
49. ZNF337_23 ZNF337_23 39 1 - - - - - 1.000 - - -
50. crx ENSDARG00000011989, ENSDARG00000113850 330 1 - - - - - 1.000 - - - cone-rod homeobox [Source:ZFIN;Acc:ZDB-GENE-010403-1]
51. si:ch211-278p9.2 ENSDARG00000095274 0 1 - - - - - 1.000 - - - si:ch211-278p9.2 [Source:ZFIN;Acc:ZDB-GENE-081028-37]
52. zgc:153932 ENSDARG00000052779, ENSDARG00000113315 3 1 - - - - - 1.000 - - - zgc:153932 [Source:ZFIN;Acc:ZDB-GENE-070209-223]
53. si:ch211-238e22.8 ENSDARG00000104804, ENSDARG00000105161 0 1 - - - - - 1.000 - - - si:ch211-238e22.8 [Source:ZFIN;Acc:ZDB-GENE-050419-231]
54. ptprq ENSDARG00000008849 3 1 - - - - - 1.000 - - - protein tyrosine phosphatase, receptor type, Q [Source:ZFIN;Acc:ZDB-GENE-050419-183]
55. CR354540.1 ENSDARG00000004051 10 1 - - - - - 1.000 - - - cytochrome P450, family 7, subfamily A, polypeptide 1b [Source:NCBI gene;Acc:559097]
56. fgf22 ENSDARG00000076510, ENSDARG00000114053, ENSDARG00000115407 3 1 - - - - - 1.000 - - - fibroblast growth factor 22 [Source:ZFIN;Acc:ZDB-GENE-050208-380]
57. si:ch211-285c6.1 ENSDARG00000076257 2 1 - - - - - 1.000 - - - si:ch211-285c6.1 [Source:ZFIN;Acc:ZDB-GENE-041001-89]
58. si:ch73-60g14.2 si:ch73-60g14.2 1 1 - - - - - 1.000 - - -
59. pla2g15 ENSDARG00000103271 4 1 - - - - - 1.000 - - - phospholipase A2, group XV [Source:ZFIN;Acc:ZDB-GENE-030131-6948]
60. FBXL21 FBXL21 6 1 - - - - - 1.000 - - -
61. BX927237.2 BX927237.2 16 1 - - - - - 1.000 - - -
62. CR391998.1 ENSDARG00000091817 15 1 - - - - - 1.000 - - - putative protein TPRXL [Source:NCBI gene;Acc:101882255]
63. prr15lb ENSDARG00000029308, ENSDARG00000110636 25 1 - 1.000 - - - - - - - proline rich 15-like b [Source:ZFIN;Acc:ZDB-GENE-050417-201]
64. si:ch211-53m15.1 si:ch211-53m15.1 28 1 - - - - - 1.000 - - -
65. zgc:136872 ENSDARG00000008553 9 1 - - - - - 1.000 - - - zgc:136872 [Source:ZFIN;Acc:ZDB-GENE-060421-5204]
66. inha ENSDARG00000052433, ENSDARG00000116262 6 1 - - - - - 1.000 - - - inhibin subunit alpha [Source:ZFIN;Acc:ZDB-GENE-060503-554]
67. si:ch73-83c10.2 si:ch73-83c10.2 22 1 - - - - - 1.000 - - -
68. GPR113 GPR113 0 1 - - - - - 1.000 - - -
69. camk1gb ENSDARG00000008788 189 1 - - - - - 1.000 - - - calcium/calmodulin-dependent protein kinase IGb [Source:ZFIN;Acc:ZDB-GENE-040426-1694]
70. si:ch73-119o17.1 si:ch73-119o17.1 6 1 - - - - - 1.000 - - -
71. si:ch211-233m11.1 ENSDARG00000074653 1 1 - - - - - 1.000 - - - si:ch211-233m11.1 [Source:ZFIN;Acc:ZDB-GENE-081028-16]
72. CR735107.4 CR735107.4 0 1 - - - - - 1.000 - - -
73. BX322612.1 BX322612.1 236 1 - - - - - 1.000 - - -
74. AL954132.1 AL954132.1 1 1 - - - - - 1.000 - - -
75. msh6 ENSDARG00000104541 197 1 - - - - - 1.000 - - - mutS homolog 6 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-020905-3]
76. CABZ01049058.1 CABZ01049058.1 7 1 - - - - - 1.000 - - -
77. TAF4_1 TAF4_1 30 1 - - - - - 1.000 - - -
78. si:ch211-226h8.4 ENSDARG00000086221, ENSDARG00000113147 38 1 - - - - - 1.000 - - - si:ch211-226h8.4 [Source:ZFIN;Acc:ZDB-GENE-050208-376]
79. dicp1.1 ENSDARG00000091993, ENSDARG00000111013, ENSDARG00000114814 2 1 - - - - - 1.000 - - - diverse immunoglobulin domain-containing protein 1.1 [Source:ZFIN;Acc:ZDB-GENE-120305-1]
80. paqr3b ENSDARG00000044253, ENSDARG00000110049 381 1 - 1.000 - - - - - - - progestin and adipoQ receptor family member IIIb [Source:ZFIN;Acc:ZDB-GENE-050913-128]
81. pcdh2g12 5 1 - - - - - 1.000 - - - protocadherin 2 gamma 12
82. fubp3 ENSDARG00000086896 21 1 - - - - - 1.000 - - - far upstream element (FUSE) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-041121-12]
83. CU570987.1 CU570987.1 7 1 - - - - - 1.000 - - -
84. si:ch211-63o20.10 13 1 - - - - - 1.000 - - - si:ch211-63o20.10
85. foxe1 ENSDARG00000079266 6 1 - - - - - 1.000 - - - forkhead box E1 [Source:ZFIN;Acc:ZDB-GENE-061116-1]
86. CU633740.1 CU633740.1 8 1 - - - - - 1.000 - - -
87. RAB37 RAB37 0 1 - - - - - 1.000 - - -
88. PEG3_8 PEG3_8 1 1 - - - - - 1.000 - - -
89. CR354382.1 CR354382.1 42 1 - - - - - 1.000 - - -
90. si:ch211-207e19.15 ENSDARG00000113022 5 1 - - - - - 1.000 - - - si:ch211-207e19.15 [Source:ZFIN;Acc:ZDB-GENE-110914-27]
91. zgc:92275 ENSDARG00000034048 9 1 - - - - - 1.000 - - - zgc:92275 [Source:ZFIN;Acc:ZDB-GENE-040718-356]
92. CCDC150 CCDC150 991 1 - - - - - 1.000 - - -
93. si:dkeyp-53e4.3 si:dkeyp-53e4.3 0 1 - - - - - 1.000 - - -
94. gpr65 ENSDARG00000045957 4 1 - - - - - 1.000 - - - G protein-coupled receptor 65 [Source:ZFIN;Acc:ZDB-GENE-120709-81]
95. aicda ENSDARG00000015734 3 1 - - - - - 1.000 - - - activation-induced cytidine deaminase [Source:ZFIN;Acc:ZDB-GENE-041122-2]
96. si:dkey-190j3.4 ENSDARG00000100743 1 1 - - - - - 1.000 - - - si:dkey-190j3.4 [Source:ZFIN;Acc:ZDB-GENE-070424-218]
97. CABZ01048021.1 CABZ01048021.1 15 1 - - - - - 1.000 - - -
98. si:dkey-121j17.5 ENSDARG00000014232 18 1 - - - - - 1.000 - - - si:dkey-121j17.5 [Source:ZFIN;Acc:ZDB-GENE-030131-4745]
99. zgc:154125 ENSDARG00000071463 7 1 - - - - - 1.000 - - - zgc:154125 [Source:ZFIN;Acc:ZDB-GENE-061013-717]
100. crygmxl1 ENSDARG00000018797 7 1 - - - - - 1.000 - - - crystallin, gamma MX, like 1 [Source:ZFIN;Acc:ZDB-GENE-050522-392]

There are 911 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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