Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for pdx1

Gene Name Gene ID Reads Annotation
pdx1 ENSDARG00000002779, ENSDARG00000109275 28 pancreatic and duodenal homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-990415-122]










Genes with expression patterns similar to pdx1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pdx1 ENSDARG00000002779, ENSDARG00000109275 28 7 - 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 pancreatic and duodenal homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-990415-122]
2. gcgb ENSDARG00000040907 182 3.569 - 0.910 - - 0.911 - - 0.787 0.961 glucagon b [Source:ZFIN;Acc:ZDB-GENE-040712-2]
3. sst2 ENSDARG00000014190 617 2.662 - - - - 0.968 - - 0.749 0.945 somatostatin 2 [Source:ZFIN;Acc:ZDB-GENE-010219-2]
4. BX682234.1 ENSDARG00000074732 5 2.403 - 0.910 - 0.712 0.781 - - - - C-type lectin domain family 12 member B-like [Source:NCBI gene;Acc:101882781]
5. si:dkey-162h11.3 41 1.983 - - - - - 1.000 - - 0.983 si:dkey-162h11.3, transcript variant X2
6. pappab ENSDARG00000059858 11 1.906 - - - - 0.906 1.000 - - - pregnancy-associated plasma protein A, pappalysin 1b [Source:ZFIN;Acc:ZDB-GENE-060526-71]
7. SLC5A10 ENSDARG00000074212 11 1.856 - - - - 0.905 - - 0.951 - solute carrier family 5 member 10 [Source:HGNC Symbol;Acc:HGNC:23155]
8. pax6l pax6l 54 1.836 - 1.000 0.836 - - - - - -
9. crygm2d13 ENSDARG00000057460 1093 1.832 - - 0.832 - - 1.000 - - - crystallin, gamma M2d13 [Source:ZFIN;Acc:ZDB-GENE-040718-105]
10. abch1 ENSDARG00000071341 1 1.818 - - - - - 1.000 - 0.818 - ATP-binding cassette, sub-family H, member 1 [Source:ZFIN;Acc:ZDB-GENE-050517-42]
11. CR790368.1 ENSDARG00000100936 20 1.804 - 0.910 - - 0.894 - - - - uncharacterized LOC110440102 [Source:NCBI gene;Acc:110440102]
12. zgc:174700 zgc:174700 35 1.79 - 0.979 - - - 0.811 - - -
13. cyp2p6 ENSDARG00000042978 46 1.782 - 0.899 - - - 0.883 - - - cytochrome P450, family 2, subfamily P, polypeptide 6 [Source:ZFIN;Acc:ZDB-GENE-040426-790]
14. cyp1b1 ENSDARG00000068934, ENSDARG00000113835 196 1.767 - - 0.767 - - 1.000 - - - cytochrome P450, family 1, subfamily B, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030902-1]
15. BX323876.2 ENSDARG00000104577 62 1.758 - 0.896 - - 0.862 - - - -
16. EPB41L2 ENSDARG00000093374 7 1.747 - - 0.747 - - 1.000 - - - erythrocyte membrane protein band 4.1 like 2 [Source:HGNC Symbol;Acc:HGNC:3379]
17. BX571880.1 ENSDARG00000097533 499 1.744 - - - - - - - 0.798 0.946
18. gcga ENSDARG00000079296 70 1.741 - - - - - - - 0.858 0.883 glucagon a [Source:ZFIN;Acc:ZDB-GENE-010219-1]
19. kif13bb ENSDARG00000073859 7 1.736 - - - 0.736 - 1.000 - - - kinesin family member 13Bb [Source:ZFIN;Acc:ZDB-GENE-090908-5]
20. VSIG10L ENSDARG00000089237 12 1.732 - - - - - 1.000 - 0.732 - V-set and immunoglobulin domain containing 10 like [Source:ZFIN;Acc:ZDB-GENE-131127-231]
21. ins ENSDARG00000035350, ENSDARG00000116735 317 1.731 - - - - 0.976 - - - 0.755 preproinsulin [Source:ZFIN;Acc:ZDB-GENE-980526-110]
22. tmem232 ENSDARG00000067646 4 1.728 - 0.910 - - - - - 0.818 - transmembrane protein 232 [Source:ZFIN;Acc:ZDB-GENE-070705-434]
23. ghrl ENSDARG00000054239 4 1.723 - - - - 0.905 - - 0.818 - ghrelin/obestatin prepropeptide [Source:ZFIN;Acc:ZDB-GENE-070622-2]
24. crygn2 ENSDARG00000030411 2551 1.713 - - 0.713 - - 1.000 - - - crystallin, gamma N2 [Source:ZFIN;Acc:ZDB-GENE-040801-16]
25. ucn3l ENSDARG00000087241 29 1.696 - 0.931 - - - - - - 0.765 urocortin 3, like [Source:ZFIN;Acc:ZDB-GENE-060130-250]
26. twf2b ENSDARG00000009727, ENSDARG00000112161 49 1.674 - 0.910 - - 0.764 - - - - twinfilin actin-binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-050522-238]
27. cyp3c4 ENSDARG00000070021 95 1.665 - 0.932 - - - 0.733 - - - cytochrome P450, family 3, subfamily C, polypeptide 4 [Source:ZFIN;Acc:ZDB-GENE-060929-96]
28. nmba ENSDARG00000068144 9 1.627 - - 0.766 - 0.861 - - - - neuromedin Ba [Source:ZFIN;Acc:ZDB-GENE-050419-3]
29. si:dkey-233e3.4 si:dkey-233e3.4 3 1.62 - - 0.715 - 0.905 - - - -
30. baxa_1 ENSDARG00000020623, ENSDARG00000089129 9 1.61 - 0.910 - - 0.700 - - - - BCL2 associated X, apoptosis regulator a [Source:ZFIN;Acc:ZDB-GENE-000511-6]
31. mxtx1 ENSDARG00000069382 32 1.578 - 0.760 - - - - - 0.818 - mix-type homeobox gene 1 [Source:ZFIN;Acc:ZDB-GENE-000710-7]
32. SLC26A3 SLC26A3 8 1.554 - - - 0.736 - - - 0.818 -
33. pax4 ENSDARG00000021336 29 1.544 - - - - - - - 0.761 0.783 paired box 4 [Source:ZFIN;Acc:ZDB-GENE-041210-244]
34. grap2a ENSDARG00000006468 70 1.543 - 0.779 - - - 0.764 - - - GRB2 related adaptor protein 2a [Source:ZFIN;Acc:ZDB-GENE-050417-275]
35. si:rp71-81e14.2 ENSDARG00000103077, ENSDARG00000109312 8 1.534 - - - 0.708 - 0.826 - - - si:rp71-81e14.2 [Source:ZFIN;Acc:ZDB-GENE-060503-95]
36. irgf3 ENSDARG00000062820 20 1.517 - - - 0.736 0.781 - - - - immunity-related GTPase family, f3 [Source:ZFIN;Acc:ZDB-GENE-051212-6]
37. HRASLS ENSDARG00000100021 16 1.473 - 0.737 - 0.736 - - - - - HRAS-like suppressor [Source:ZFIN;Acc:ZDB-GENE-040718-330]
38. arhgap31 ENSDARG00000059472 23 1.445 - - - - 0.727 0.718 - - - Rho GTPase activating protein 31 [Source:ZFIN;Acc:ZDB-GENE-100922-256]
39. gsc ENSDARG00000059073, ENSDARG00000111184, ENSDARG00000115937 152 1 - - - - - 1.000 - - - goosecoid [Source:ZFIN;Acc:ZDB-GENE-980528-2060]
40. si:ch211-226h8.4 ENSDARG00000086221, ENSDARG00000113147 38 1 - - - - - 1.000 - - - si:ch211-226h8.4 [Source:ZFIN;Acc:ZDB-GENE-050208-376]
41. ribc1 ENSDARG00000055739 32 1 - - - - - 1.000 - - - RIB43A domain with coiled-coils 1 [Source:ZFIN;Acc:ZDB-GENE-081031-7]
42. UBASH3B_1 UBASH3B_1 28 1 - - - - - 1.000 - - -
43. BX511006.2 BX511006.2 29 1 - - - - - 1.000 - - -
44. FP236162.1 FP236162.1 2 1 - - - - - 1.000 - - -
45. foxe1 ENSDARG00000079266 6 1 - - - - - 1.000 - - - forkhead box E1 [Source:ZFIN;Acc:ZDB-GENE-061116-1]
46. FBXL21 FBXL21 6 1 - - - - - 1.000 - - -
47. plp1b ENSDARG00000011929 8 1 - - - - - 1.000 - - - proteolipid protein 1b [Source:ZFIN;Acc:ZDB-GENE-030710-6]
48. slc15a1a ENSDARG00000100315 23 1 - - - - - 1.000 - - - solute carrier family 15 (oligopeptide transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-091204-9]
49. metap2b ENSDARG00000102571 4 1 - - - - - 1.000 - - - methionyl aminopeptidase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-2172]
50. CU915778.1 ENSDARG00000099025 40 1 - - - - - 1.000 - - -
51. AL954132.1 AL954132.1 1 1 - - - - - 1.000 - - -
52. cx55.5 13 1 - - - - - 1.000 - - - connexin 55.5, transcript variant X1
53. si:dkeyp-35f11.2 si:dkeyp-35f11.2 0 1 - - - - - 1.000 - - -
54. CR354540.1 ENSDARG00000004051 10 1 - - - - - 1.000 - - - cytochrome P450, family 7, subfamily A, polypeptide 1b [Source:NCBI gene;Acc:559097]
55. cep78 ENSDARG00000039229 1 1 - - - - - 1.000 - - - centrosomal protein 78 [Source:ZFIN;Acc:ZDB-GENE-070905-1]
56. CT868708.1 ENSDARG00000097601 2 1 - - - - - 1.000 - - -
57. QSOX2 ENSDARG00000077174 26 1 - - - - - 1.000 - - - quiescin Q6 sulfhydryl oxidase 2 [Source:ZFIN;Acc:ZDB-GENE-110203-4]
58. dpyda dpyda 12 1 - - - - - 1.000 - - -
59. si:ch211-13o20.1 si:ch211-13o20.1 30 1 - - - - - 1.000 - - -
60. phox2ba ENSDARG00000075330 1 1 - - - - - 1.000 - - - paired-like homeobox 2ba [Source:ZFIN;Acc:ZDB-GENE-090313-51]
61. si:ch211-12e13.2 si:ch211-12e13.2 3 1 - - - - - 1.000 - - -
62. SNORD89 SNORD89 1 1 - - - - - 1.000 - - -
63. dicp1.1 ENSDARG00000091993, ENSDARG00000111013, ENSDARG00000114814 2 1 - - - - - 1.000 - - - diverse immunoglobulin domain-containing protein 1.1 [Source:ZFIN;Acc:ZDB-GENE-120305-1]
64. CABZ01023601.1 CABZ01023601.1 1 1 - - - - - 1.000 - - -
65. zgc:136872 ENSDARG00000008553 9 1 - - - - - 1.000 - - - zgc:136872 [Source:ZFIN;Acc:ZDB-GENE-060421-5204]
66. zgc:103559 ENSDARG00000038293 1 1 - - - - - 1.000 - - - zgc:103559 [Source:ZFIN;Acc:ZDB-GENE-041212-22]
67. U6_29 U6_29 0 1 - - - - - 1.000 - - -
68. C13H10orf53 C13H10orf53 3 1 - - - - - 1.000 - - -
69. PPP1R16A ENSDARG00000076980 40 1 - - - - - 1.000 - - - protein phosphatase 1, regulatory subunit 16A [Source:ZFIN;Acc:ZDB-GENE-121214-252]
70. msh6 ENSDARG00000104541 197 1 - - - - - 1.000 - - - mutS homolog 6 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-020905-3]
71. PIK3CA ENSDARG00000075456 39 1 - - - - - 1.000 - - - phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha [Source:ZFIN;Acc:ZDB-GENE-130409-1]
72. fgf22 ENSDARG00000076510, ENSDARG00000114053, ENSDARG00000115407 3 1 - - - - - 1.000 - - - fibroblast growth factor 22 [Source:ZFIN;Acc:ZDB-GENE-050208-380]
73. C3AR1 18 1 - - - - - 1.000 - - - C3a anaphylatoxin chemotactic receptor
74. lrrc18b ENSDARG00000076236 5 1 - - - - - 1.000 - - - leucine rich repeat containing 18b [Source:ZFIN;Acc:ZDB-GENE-110315-1]
75. BX957353.1 BX957353.1 10 1 - - - - - 1.000 - - -
76. si:dkeyp-46h3.6 ENSDARG00000087363 14 1 - - - - - 1.000 - - - si:dkeyp-46h3.6 [Source:ZFIN;Acc:ZDB-GENE-060503-90]
77. si:ch73-60g14.2 si:ch73-60g14.2 1 1 - - - - - 1.000 - - -
78. CCDC150 CCDC150 991 1 - - - - - 1.000 - - -
79. cx30.9 ENSDARG00000070362 17 1 - - - - - 1.000 - - - connexin 30.9 [Source:ZFIN;Acc:ZDB-GENE-050616-2]
80. tcf23 ENSDARG00000087381 6 1 - - - - - 1.000 - - - transcription factor 23 [Source:ZFIN;Acc:ZDB-GENE-090806-5]
81. HYKK_1 HYKK_1 4 1 - - - - - 1.000 - - -
82. TAF4_1 TAF4_1 30 1 - - - - - 1.000 - - -
83. prr15lb ENSDARG00000029308, ENSDARG00000110636 25 1 - 1.000 - - - - - - - proline rich 15-like b [Source:ZFIN;Acc:ZDB-GENE-050417-201]
84. si:dkey-105f21.1 si:dkey-105f21.1 5 1 - - - - - 1.000 - - -
85. sftpbb ENSDARG00000067566 13 1 - - - - - 1.000 - - - surfactant protein Bb [Source:ZFIN;Acc:ZDB-GENE-060526-155]
86. crygmxl1 ENSDARG00000018797 7 1 - - - - - 1.000 - - - crystallin, gamma MX, like 1 [Source:ZFIN;Acc:ZDB-GENE-050522-392]
87. slco1f4 ENSDARG00000101014 0 1 - - - - - 1.000 - - - solute carrier organic anion transporter family, member 1F4 [Source:ZFIN;Acc:ZDB-GENE-070112-2172]
88. trim35-3 ENSDARG00000052255 1 1 - - - - - 1.000 - - - tripartite motif containing 35-3 [Source:ZFIN;Acc:ZDB-GENE-070912-56]
89. zgc:174698 ENSDARG00000075731, ENSDARG00000077266, ENSDARG00000098236 24 1 - - - - - 1.000 - - - zgc:174698 [Source:ZFIN;Acc:ZDB-GENE-080204-74]
90. ftr19 ENSDARG00000094131 0 1 - - - - - 1.000 - - - finTRIM family, member 19 [Source:ZFIN;Acc:ZDB-GENE-090506-5]
91. si:ch73-27e22.5 si:ch73-27e22.5 10 1 - - - - - 1.000 - - -
92. zgc:154125 ENSDARG00000071463 7 1 - - - - - 1.000 - - - zgc:154125 [Source:ZFIN;Acc:ZDB-GENE-061013-717]
93. si:dkey-121j17.5 ENSDARG00000014232 18 1 - - - - - 1.000 - - - si:dkey-121j17.5 [Source:ZFIN;Acc:ZDB-GENE-030131-4745]
94. akt3a ENSDARG00000104810 21 1 - - - - - 1.000 - - - v-akt murine thymoma viral oncogene homolog 3a [Source:ZFIN;Acc:ZDB-GENE-050419-180]
95. si:ch211-169j7.3 si:ch211-169j7.3 4 1 - - - - - 1.000 - - -
96. si:ch73-83c10.2 si:ch73-83c10.2 22 1 - - - - - 1.000 - - -
97. USH1G USH1G 25 1 - - - - - 1.000 - - -
98. FAM149A ENSDARG00000073709 7 1 - - - - - 1.000 - - - family with sequence similarity 149 member A [Source:ZFIN;Acc:ZDB-GENE-081107-36]
99. BX682552.2_1 BX682552.2_1 37 1 - - - - - 1.000 - - -
100. lrrcc1 ENSDARG00000078535 118 1 - - - - - 1.000 - - - leucine rich repeat and coiled-coil centrosomal protein 1 [Source:ZFIN;Acc:ZDB-GENE-041111-207]

There are 911 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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