Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for pdx1

Gene Name Gene ID Reads Annotation
pdx1 ENSDARG00000002779, ENSDARG00000109275 28 pancreatic and duodenal homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-990415-122]










Genes with expression patterns similar to pdx1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pdx1 ENSDARG00000002779, ENSDARG00000109275 28 7 - 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 pancreatic and duodenal homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-990415-122]
2. gcgb ENSDARG00000040907 182 3.569 - 0.910 - - 0.911 - - 0.787 0.961 glucagon b [Source:ZFIN;Acc:ZDB-GENE-040712-2]
3. sst2 ENSDARG00000014190 617 2.662 - - - - 0.968 - - 0.749 0.945 somatostatin 2 [Source:ZFIN;Acc:ZDB-GENE-010219-2]
4. BX682234.1 ENSDARG00000074732 5 2.403 - 0.910 - 0.712 0.781 - - - - C-type lectin domain family 12 member B-like [Source:NCBI gene;Acc:101882781]
5. si:dkey-162h11.3 41 1.983 - - - - - 1.000 - - 0.983 si:dkey-162h11.3, transcript variant X2
6. pappab ENSDARG00000059858 11 1.906 - - - - 0.906 1.000 - - - pregnancy-associated plasma protein A, pappalysin 1b [Source:ZFIN;Acc:ZDB-GENE-060526-71]
7. SLC5A10 ENSDARG00000074212 11 1.856 - - - - 0.905 - - 0.951 - solute carrier family 5 member 10 [Source:HGNC Symbol;Acc:HGNC:23155]
8. pax6l pax6l 54 1.836 - 1.000 0.836 - - - - - -
9. crygm2d13 ENSDARG00000057460 1093 1.832 - - 0.832 - - 1.000 - - - crystallin, gamma M2d13 [Source:ZFIN;Acc:ZDB-GENE-040718-105]
10. abch1 ENSDARG00000071341 1 1.818 - - - - - 1.000 - 0.818 - ATP-binding cassette, sub-family H, member 1 [Source:ZFIN;Acc:ZDB-GENE-050517-42]
11. CR790368.1 ENSDARG00000100936 20 1.804 - 0.910 - - 0.894 - - - - uncharacterized LOC110440102 [Source:NCBI gene;Acc:110440102]
12. zgc:174700 zgc:174700 35 1.79 - 0.979 - - - 0.811 - - -
13. cyp2p6 ENSDARG00000042978 46 1.782 - 0.899 - - - 0.883 - - - cytochrome P450, family 2, subfamily P, polypeptide 6 [Source:ZFIN;Acc:ZDB-GENE-040426-790]
14. cyp1b1 ENSDARG00000068934, ENSDARG00000113835 196 1.767 - - 0.767 - - 1.000 - - - cytochrome P450, family 1, subfamily B, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030902-1]
15. BX323876.2 ENSDARG00000104577 62 1.758 - 0.896 - - 0.862 - - - -
16. EPB41L2 ENSDARG00000093374 7 1.747 - - 0.747 - - 1.000 - - - erythrocyte membrane protein band 4.1 like 2 [Source:HGNC Symbol;Acc:HGNC:3379]
17. BX571880.1 ENSDARG00000097533 499 1.744 - - - - - - - 0.798 0.946
18. gcga ENSDARG00000079296 70 1.741 - - - - - - - 0.858 0.883 glucagon a [Source:ZFIN;Acc:ZDB-GENE-010219-1]
19. kif13bb ENSDARG00000073859 7 1.736 - - - 0.736 - 1.000 - - - kinesin family member 13Bb [Source:ZFIN;Acc:ZDB-GENE-090908-5]
20. VSIG10L ENSDARG00000089237 12 1.732 - - - - - 1.000 - 0.732 - V-set and immunoglobulin domain containing 10 like [Source:ZFIN;Acc:ZDB-GENE-131127-231]
21. ins ENSDARG00000035350, ENSDARG00000116735 317 1.731 - - - - 0.976 - - - 0.755 preproinsulin [Source:ZFIN;Acc:ZDB-GENE-980526-110]
22. tmem232 ENSDARG00000067646 4 1.728 - 0.910 - - - - - 0.818 - transmembrane protein 232 [Source:ZFIN;Acc:ZDB-GENE-070705-434]
23. ghrl ENSDARG00000054239 4 1.723 - - - - 0.905 - - 0.818 - ghrelin/obestatin prepropeptide [Source:ZFIN;Acc:ZDB-GENE-070622-2]
24. crygn2 ENSDARG00000030411 2551 1.713 - - 0.713 - - 1.000 - - - crystallin, gamma N2 [Source:ZFIN;Acc:ZDB-GENE-040801-16]
25. ucn3l ENSDARG00000087241 29 1.696 - 0.931 - - - - - - 0.765 urocortin 3, like [Source:ZFIN;Acc:ZDB-GENE-060130-250]
26. twf2b ENSDARG00000009727, ENSDARG00000112161 49 1.674 - 0.910 - - 0.764 - - - - twinfilin actin-binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-050522-238]
27. cyp3c4 ENSDARG00000070021 95 1.665 - 0.932 - - - 0.733 - - - cytochrome P450, family 3, subfamily C, polypeptide 4 [Source:ZFIN;Acc:ZDB-GENE-060929-96]
28. nmba ENSDARG00000068144 9 1.627 - - 0.766 - 0.861 - - - - neuromedin Ba [Source:ZFIN;Acc:ZDB-GENE-050419-3]
29. si:dkey-233e3.4 si:dkey-233e3.4 3 1.62 - - 0.715 - 0.905 - - - -
30. baxa_1 ENSDARG00000020623, ENSDARG00000089129 9 1.61 - 0.910 - - 0.700 - - - - BCL2 associated X, apoptosis regulator a [Source:ZFIN;Acc:ZDB-GENE-000511-6]
31. mxtx1 ENSDARG00000069382 32 1.578 - 0.760 - - - - - 0.818 - mix-type homeobox gene 1 [Source:ZFIN;Acc:ZDB-GENE-000710-7]
32. SLC26A3 SLC26A3 8 1.554 - - - 0.736 - - - 0.818 -
33. pax4 ENSDARG00000021336 29 1.544 - - - - - - - 0.761 0.783 paired box 4 [Source:ZFIN;Acc:ZDB-GENE-041210-244]
34. grap2a ENSDARG00000006468 70 1.543 - 0.779 - - - 0.764 - - - GRB2 related adaptor protein 2a [Source:ZFIN;Acc:ZDB-GENE-050417-275]
35. si:rp71-81e14.2 ENSDARG00000103077, ENSDARG00000109312 8 1.534 - - - 0.708 - 0.826 - - - si:rp71-81e14.2 [Source:ZFIN;Acc:ZDB-GENE-060503-95]
36. irgf3 ENSDARG00000062820 20 1.517 - - - 0.736 0.781 - - - - immunity-related GTPase family, f3 [Source:ZFIN;Acc:ZDB-GENE-051212-6]
37. HRASLS ENSDARG00000100021 16 1.473 - 0.737 - 0.736 - - - - - HRAS-like suppressor [Source:ZFIN;Acc:ZDB-GENE-040718-330]
38. arhgap31 ENSDARG00000059472 23 1.445 - - - - 0.727 0.718 - - - Rho GTPase activating protein 31 [Source:ZFIN;Acc:ZDB-GENE-100922-256]
39. tyro3 ENSDARG00000005356 4 1 - - - - - 1.000 - - - TYRO3 protein tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-990714-13]
40. LARP4 LARP4 48 1 - - - - - 1.000 - - -
41. plp1b ENSDARG00000011929 8 1 - - - - - 1.000 - - - proteolipid protein 1b [Source:ZFIN;Acc:ZDB-GENE-030710-6]
42. CABZ01048021.1 CABZ01048021.1 15 1 - - - - - 1.000 - - -
43. FAM149A ENSDARG00000073709 7 1 - - - - - 1.000 - - - family with sequence similarity 149 member A [Source:ZFIN;Acc:ZDB-GENE-081107-36]
44. zgc:174698 ENSDARG00000075731, ENSDARG00000077266, ENSDARG00000098236 24 1 - - - - - 1.000 - - - zgc:174698 [Source:ZFIN;Acc:ZDB-GENE-080204-74]
45. fam167aa ENSDARG00000067665, ENSDARG00000112798 13 1 - - - - - 1.000 - - - family with sequence similarity 167, member Aa [Source:ZFIN;Acc:ZDB-GENE-061013-209]
46. cyp2k22 ENSDARG00000040433 13 1 - - - - - 1.000 - - - cytochrome P450, family 2, subfamily K, polypeptide 22 [Source:ZFIN;Acc:ZDB-GENE-040426-822]
47. FP236162.1 FP236162.1 2 1 - - - - - 1.000 - - -
48. TDRD7B ENSDARG00000077523 124 1 - 1.000 - - - - - - - tudor domain containing 7 b [Source:ZFIN;Acc:ZDB-GENE-150109-14]
49. crygm2a ENSDARG00000057536 1 1 - - - - - 1.000 - - - crystallin, gamma M2a [Source:ZFIN;Acc:ZDB-GENE-050516-9]
50. trim35-3 ENSDARG00000052255 1 1 - - - - - 1.000 - - - tripartite motif containing 35-3 [Source:ZFIN;Acc:ZDB-GENE-070912-56]
51. si:dkey-52l1.1 si:dkey-52l1.1 1 1 - - - - - 1.000 - - -
52. crygmxl1 ENSDARG00000018797 7 1 - - - - - 1.000 - - - crystallin, gamma MX, like 1 [Source:ZFIN;Acc:ZDB-GENE-050522-392]
53. ftr42 4 1 - - - - - 1.000 - - - finTRIM family, member 42
54. BX511006.2 BX511006.2 29 1 - - - - - 1.000 - - -
55. paqr3b ENSDARG00000044253, ENSDARG00000110049 381 1 - 1.000 - - - - - - - progestin and adipoQ receptor family member IIIb [Source:ZFIN;Acc:ZDB-GENE-050913-128]
56. gsc ENSDARG00000059073, ENSDARG00000111184, ENSDARG00000115937 152 1 - - - - - 1.000 - - - goosecoid [Source:ZFIN;Acc:ZDB-GENE-980528-2060]
57. SQLE SQLE 1 1 - - - - - 1.000 - - -
58. si:ch211-280c4.3 si:ch211-280c4.3 0 1 - - - - - 1.000 - - -
59. si:dkey-79c1.1 ENSDARG00000093179 11 1 - - - - - 1.000 - - - si:dkey-79c1.1 [Source:ZFIN;Acc:ZDB-GENE-060531-153]
60. mst1rb ENSDARG00000004871, ENSDARG00000116535 1 1 - - - - - 1.000 - - - macrophage stimulating 1 receptor b [Source:ZFIN;Acc:ZDB-GENE-071218-3]
61. UBASH3B_1 UBASH3B_1 28 1 - - - - - 1.000 - - -
62. zgc:92275 ENSDARG00000034048 9 1 - - - - - 1.000 - - - zgc:92275 [Source:ZFIN;Acc:ZDB-GENE-040718-356]
63. si:dkey-105f21.1 si:dkey-105f21.1 5 1 - - - - - 1.000 - - -
64. inha ENSDARG00000052433, ENSDARG00000116262 6 1 - - - - - 1.000 - - - inhibin subunit alpha [Source:ZFIN;Acc:ZDB-GENE-060503-554]
65. si:ch211-203b20.4 ENSDARG00000091790 3 1 - - - - - 1.000 - - - si:ch211-203b20.4 [Source:ZFIN;Acc:ZDB-GENE-060503-208]
66. lrrc18b ENSDARG00000076236 5 1 - - - - - 1.000 - - - leucine rich repeat containing 18b [Source:ZFIN;Acc:ZDB-GENE-110315-1]
67. si:dkeyp-53e4.3 si:dkeyp-53e4.3 0 1 - - - - - 1.000 - - -
68. ptprq ENSDARG00000008849 3 1 - - - - - 1.000 - - - protein tyrosine phosphatase, receptor type, Q [Source:ZFIN;Acc:ZDB-GENE-050419-183]
69. klc1a ENSDARG00000009796 10 1 - - - - - 1.000 - - - kinesin light chain 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1599]
70. C3AR1 18 1 - - - - - 1.000 - - - C3a anaphylatoxin chemotactic receptor
71. tmem174 ENSDARG00000035388 2 1 - - - - - 1.000 - - - transmembrane protein 174 [Source:ZFIN;Acc:ZDB-GENE-080819-2]
72. entpd8 ENSDARG00000005565 18 1 - - - - - 1.000 - - - ectonucleoside triphosphate diphosphohydrolase 8 [Source:ZFIN;Acc:ZDB-GENE-040724-142]
73. si:dkey-228g21.5 si:dkey-228g21.5 1 1 - - - - - 1.000 - - -
74. v2rh13 ENSDARG00000088192 0 1 - - - - - 1.000 - - - vomeronasal 2 receptor, h13 [Source:ZFIN;Acc:ZDB-GENE-050419-264]
75. rnf217 ENSDARG00000060944 10 1 - - - - - 1.000 - - - ring finger protein 217 [Source:ZFIN;Acc:ZDB-GENE-060503-400]
76. C25H11orf74 C25H11orf74 161 1 - - - - - 1.000 - - -
77. si:ch211-285c6.1 ENSDARG00000076257 2 1 - - - - - 1.000 - - - si:ch211-285c6.1 [Source:ZFIN;Acc:ZDB-GENE-041001-89]
78. rspo4 ENSDARG00000038593 3 1 - - - - - 1.000 - - - R-spondin 4 [Source:ZFIN;Acc:ZDB-GENE-110103-2]
79. slco1f4 ENSDARG00000101014 0 1 - - - - - 1.000 - - - solute carrier organic anion transporter family, member 1F4 [Source:ZFIN;Acc:ZDB-GENE-070112-2172]
80. btr06 ENSDARG00000054184 1 1 - - - - - 1.000 - - - bloodthirsty-related gene family, member 6 [Source:ZFIN;Acc:ZDB-GENE-080516-2]
81. pdgfrb ENSDARG00000100897 0 1 - - - - - 1.000 - - - platelet-derived growth factor receptor, beta polypeptide [Source:ZFIN;Acc:ZDB-GENE-030805-2]
82. srd5a2a ENSDARG00000043587 21 1 - - - - - 1.000 - - - steroid-5-alpha-reductase, alpha polypeptide 2a [Source:ZFIN;Acc:ZDB-GENE-050417-199]
83. camk1gb ENSDARG00000008788 189 1 - - - - - 1.000 - - - calcium/calmodulin-dependent protein kinase IGb [Source:ZFIN;Acc:ZDB-GENE-040426-1694]
84. si:dkey-121j17.5 ENSDARG00000014232 18 1 - - - - - 1.000 - - - si:dkey-121j17.5 [Source:ZFIN;Acc:ZDB-GENE-030131-4745]
85. phox2ba ENSDARG00000075330 1 1 - - - - - 1.000 - - - paired-like homeobox 2ba [Source:ZFIN;Acc:ZDB-GENE-090313-51]
86. nptx2b ENSDARG00000045164 5 1 - 1.000 - - - - - - - neuronal pentraxin IIb [Source:ZFIN;Acc:ZDB-GENE-110328-1]
87. si:ch211-169j7.3 si:ch211-169j7.3 4 1 - - - - - 1.000 - - -
88. si:dkeyp-67e1.6 ENSDARG00000073947, ENSDARG00000113513, ENSDARG00000113783 20 1 - - - - - 1.000 - - - si:dkeyp-67e1.6 [Source:ZFIN;Acc:ZDB-GENE-061207-87]
89. HYKK_1 HYKK_1 4 1 - - - - - 1.000 - - -
90. pcdh2g12 5 1 - - - - - 1.000 - - - protocadherin 2 gamma 12
91. prr15lb ENSDARG00000029308, ENSDARG00000110636 25 1 - 1.000 - - - - - - - proline rich 15-like b [Source:ZFIN;Acc:ZDB-GENE-050417-201]
92. USH1G USH1G 25 1 - - - - - 1.000 - - -
93. CU550716.4 CU550716.4 14 1 - - - - - 1.000 - - -
94. zgc:174862 ENSDARG00000077571 201 1 - - - - - 1.000 - - - zgc:174862 [Source:ZFIN;Acc:ZDB-GENE-080303-29]
95. si:ch211-53m15.1 si:ch211-53m15.1 28 1 - - - - - 1.000 - - -
96. cx30.9 ENSDARG00000070362 17 1 - - - - - 1.000 - - - connexin 30.9 [Source:ZFIN;Acc:ZDB-GENE-050616-2]
97. si:ch211-207e19.15 ENSDARG00000113022 5 1 - - - - - 1.000 - - - si:ch211-207e19.15 [Source:ZFIN;Acc:ZDB-GENE-110914-27]
98. gcdhl gcdhl 38 1 - - - - - 1.000 - - -
99. si:ch211-223a10.3 si:ch211-223a10.3 3 1 - - - - - 1.000 - - -
100. FLVCR2 FLVCR2 5 1 - - - - - 1.000 - - -

There are 911 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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