Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for pds5a

Gene Name Gene ID Reads Annotation
pds5a ENSDARG00000055022, ENSDARG00000115793 3842 PDS5 cohesin associated factor A [Source:ZFIN;Acc:ZDB-GENE-040426-1612]










Genes with expression patterns similar to pds5a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pds5a ENSDARG00000055022, ENSDARG00000115793 3842 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 PDS5 cohesin associated factor A [Source:ZFIN;Acc:ZDB-GENE-040426-1612]
2. ctbp1 ENSDARG00000057007, ENSDARG00000115804 5795 2.998 0.703 - 0.770 - - 0.718 0.807 - - C-terminal binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-010130-1]
3. u2af2b ENSDARG00000011740 6946 2.969 - - 0.754 0.789 - 0.703 0.723 - - U2 small nuclear RNA auxiliary factor 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1881]
4. strn3 ENSDARG00000001729 4608 2.675 - 0.971 - - - - 0.723 - 0.981 striatin, calmodulin binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-030616-405]
5. setb ENSDARG00000003920 21788 2.392 - - - - - 0.727 0.704 - 0.961 SET nuclear proto-oncogene b [Source:ZFIN;Acc:ZDB-GENE-030131-433]
6. u2surp ENSDARG00000061490 2814 2.383 - 0.965 0.715 0.703 - - - - - U2 snRNP-associated SURP domain containing [Source:ZFIN;Acc:ZDB-GENE-070912-400]
7. uba1 ENSDARG00000037559 11579 2.376 - - - 0.790 0.805 0.781 - - - ubiquitin-like modifier activating enzyme 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2009]
8. ANKRD11 ENSDARG00000051886 10024 2.351 - - 0.734 - - 0.818 0.799 - - ankyrin repeat domain 11 [Source:ZFIN;Acc:ZDB-GENE-030131-3932]
9. hdac1 ENSDARG00000015427 19804 2.35 - 0.789 0.775 - - 0.786 - - - histone deacetylase 1 [Source:ZFIN;Acc:ZDB-GENE-020419-32]
10. ctnnb1 ENSDARG00000014571 12004 2.333 - - 0.740 0.788 - 0.805 - - - catenin (cadherin-associated protein), beta 1 [Source:ZFIN;Acc:ZDB-GENE-980526-362]
11. FNBP4 ENSDARG00000051800 2839 2.309 - - 0.750 - 0.778 0.781 - - - formin binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-130530-633]
12. znf865 ENSDARG00000036698 15532 2.252 0.729 - - 0.769 - 0.754 - - - zinc finger protein 865 [Source:ZFIN;Acc:ZDB-GENE-060503-896]
13. fbxo5 ENSDARG00000039020 1284 2.236 0.736 - 0.713 0.787 - - - - - F-box protein 5 [Source:ZFIN;Acc:ZDB-GENE-030131-4027]
14. prp19 prp19 4804 2.222 - - - 0.748 0.707 0.767 - - -
15. rbbp6 ENSDARG00000037919 4813 2.22 - 0.797 0.716 - 0.707 - - - - retinoblastoma binding protein 6 [Source:ZFIN;Acc:ZDB-GENE-040930-5]
16. rnps1 ENSDARG00000116743 9994 2.213 - - 0.719 - 0.776 - 0.718 - - RNA binding protein S1, serine-rich domain [Source:NCBI gene;Acc:327020]
17. ppp4r2b ENSDARG00000053447 2506 2.152 - - - 0.723 - 0.718 0.711 - - protein phosphatase 4, regulatory subunit 2b [Source:ZFIN;Acc:ZDB-GENE-030131-3008]
18. fam60al 2846 2.142 - - 0.700 - 0.709 0.733 - - - family with sequence similarity 60, member A, like
19. rab5c ENSDARG00000026712 4733 1.849 - 0.850 - - - - - - 0.999 RAB5C, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-031118-30]
20. slc25a4 ENSDARG00000027355, ENSDARG00000112318 17542 1.839 - 0.985 - - - - - - 0.854 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5275]
21. CHD1 ENSDARG00000103787 1645 1.821 - 0.988 0.833 - - - - - - chromodomain helicase DNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7120]
22. ncapd2 ENSDARG00000005058 2819 1.777 - 0.986 - - 0.791 - - - - non-SMC condensin I complex, subunit D2 [Source:ZFIN;Acc:ZDB-GENE-050506-59]
23. gnao1b ENSDARG00000036058, ENSDARG00000112730 1951 1.761 - 0.978 - - - 0.783 - - - guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O, b [Source:ZFIN;Acc:ZDB-GENE-040426-1693]
24. CIDEC ENSDARG00000059651, ENSDARG00000110335 418 1.756 0.782 0.974 - - - - - - - cell death-inducing DFFA-like effector c [Source:ZFIN;Acc:ZDB-GENE-030131-4591]
25. rnf7 ENSDARG00000055524 3390 1.744 - 0.981 - - - - 0.763 - - ring finger protein 7 [Source:ZFIN;Acc:ZDB-GENE-050220-12]
26. rnf2 ENSDARG00000010381 3427 1.742 - 0.987 - - - 0.755 - - - ring finger protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5243]
27. parp1 ENSDARG00000019529 6787 1.734 - - 0.869 - 0.865 - - - - poly (ADP-ribose) polymerase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3955]
28. wdr5 ENSDARG00000016903 4834 1.731 - 0.974 0.757 - - - - - - WD repeat domain 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2082]
29. khdrbs1b ENSDARG00000070475 18157 1.729 - - - 0.744 - - - - 0.985 KH domain containing, RNA binding, signal transduction associated 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2344]
30. ube2e2 ENSDARG00000034670 5918 1.728 - 0.993 - - - - - 0.735 - ubiquitin-conjugating enzyme E2E 2 [Source:ZFIN;Acc:ZDB-GENE-040801-237]
31. prr12a ENSDARG00000074229 1668 1.701 - 0.992 - - - - 0.709 - - proline rich 12a [Source:ZFIN;Acc:ZDB-GENE-041111-223]
32. AGAP1 ENSDARG00000062123, ENSDARG00000113863 2842 1.699 - - - - - 0.704 - - 0.995 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 [Source:ZFIN;Acc:ZDB-GENE-130405-1]
33. cttnbp2 ENSDARG00000040991 1697 1.697 - 0.989 - - - - 0.708 - - cortactin binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8134]
34. pank1b ENSDARG00000010098 3202 1.695 - 0.982 - - - - 0.713 - - pantothenate kinase 1b [Source:ZFIN;Acc:ZDB-GENE-070209-259]
35. rtf1 ENSDARG00000008947 6596 1.69 - 0.942 - - - 0.748 - - - RTF1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-030131-6778]
36. rap2c ENSDARG00000015649 4709 1.68 - 0.923 - - - - 0.757 - - RAP2C, member of RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-041024-1]
37. atf4b2 atf4b2 4734 1.675 - 0.949 - - - - 0.726 - -
38. tardbpl ENSDARG00000004452, ENSDARG00000116205 12160 1.643 - - - 0.747 - 0.896 - - - TAR DNA binding protein, like [Source:ZFIN;Acc:ZDB-GENE-031030-1]
39. eno1a ENSDARG00000022456, ENSDARG00000116458 14401 1.642 - 0.837 - - - - - - 0.805 enolase 1a, (alpha) [Source:ZFIN;Acc:ZDB-GENE-030131-6048]
40. nucks1a ENSDARG00000078473 28285 1.638 - - 0.828 - - 0.810 - - - nuclear casein kinase and cyclin-dependent kinase substrate 1a [Source:ZFIN;Acc:ZDB-GENE-040912-175]
41. atp6v1c1a ENSDARG00000023967 4611 1.632 - - - - - 0.786 0.846 - - ATPase H+ transporting V1 subunit C1a [Source:ZFIN;Acc:ZDB-GENE-030616-612]
42. TNRC6C_1 TNRC6C_1 6574 1.623 - - - 0.772 - 0.851 - - -
43. ylpm1 ENSDARG00000043680 7676 1.613 - - 0.837 - - 0.776 - - - YLP motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2196]
44. BX511086.1 BX511086.1 8308 1.612 - - - - - 0.838 0.774 - -
45. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 1.609 - - 0.753 0.856 - - - - - cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
46. cnn3b ENSDARG00000029856 4807 1.6 - - - - - 0.808 0.792 - - calponin 3, acidic b [Source:ZFIN;Acc:ZDB-GENE-050522-263]
47. SERBP1 SERBP1 9276 1.591 - - - - - 0.839 0.752 - -
48. ubtf ENSDARG00000035066 4070 1.59 - - - - - 0.798 0.792 - - upstream binding transcription factor [Source:ZFIN;Acc:ZDB-GENE-030616-252]
49. ptenb ENSDARG00000056623 5783 1.578 - - - - - 0.804 0.774 - - phosphatase and tensin homolog B [Source:ZFIN;Acc:ZDB-GENE-030616-47]
50. col1a2 ENSDARG00000020007 36228 1.575 - 0.868 - - - - - - 0.707 collagen, type I, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8415]
51. hnrnpl2 ENSDARG00000059303, ENSDARG00000114431 6633 1.574 - - - - - 0.798 0.776 - - heterogeneous nuclear ribonucleoprotein L2 [Source:ZFIN;Acc:ZDB-GENE-040426-2707]
52. apex1 ENSDARG00000045843 6345 1.574 - - 0.817 0.757 - - - - - APEX nuclease (multifunctional DNA repair enzyme) 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2761]
53. snrpf ENSDARG00000105037 10241 1.573 - - - - - 0.774 0.799 - - small nuclear ribonucleoprotein polypeptide F [Source:ZFIN;Acc:ZDB-GENE-040930-9]
54. smc1al ENSDARG00000058203 8838 1.569 - - 0.784 - - 0.785 - - - structural maintenance of chromosomes 1A, like [Source:ZFIN;Acc:ZDB-GENE-040426-57]
55. smarce1 ENSDARG00000016871 9628 1.566 - - - - - 0.786 0.780 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-967]
56. kif22 ENSDARG00000102624 3694 1.565 - - 0.751 - - 0.814 - - - kinesin family member 22 [Source:ZFIN;Acc:ZDB-GENE-080204-34]
57. ep300b ENSDARG00000061108 5173 1.553 - - 0.792 - - 0.761 - - - E1A binding protein p300 b [Source:ZFIN;Acc:ZDB-GENE-080403-15]
58. ewsr1b ENSDARG00000020465, ENSDARG00000117011 10260 1.553 - - 0.839 0.714 - - - - - EWS RNA-binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-1600]
59. smarcad1 smarcad1 1457 1.552 - - - - 0.771 - 0.781 - -
60. ezh2 ENSDARG00000010571 3273 1.547 - - 0.763 - - - 0.784 - - enhancer of zeste 2 polycomb repressive complex 2 subunit [Source:ZFIN;Acc:ZDB-GENE-041111-259]
61. cltcb ENSDARG00000090716 5544 1.547 - - - - - 0.790 0.757 - - clathrin, heavy chain b (Hc) [Source:ZFIN;Acc:ZDB-GENE-050227-12]
62. plagx ENSDARG00000036855 3768 1.547 - - 0.793 - 0.754 - - - - pleiomorphic adenoma gene X [Source:ZFIN;Acc:ZDB-GENE-030131-839]
63. ppp2r5a ENSDARG00000027017 2397 1.547 0.777 0.770 - - - - - - - protein phosphatase 2, regulatory subunit B', alpha isoform [Source:ZFIN;Acc:ZDB-GENE-040724-174]
64. dnmt3b dnmt3b 2522 1.546 - - - - - 0.774 - 0.772 -
65. gnb2 ENSDARG00000035357, ENSDARG00000105310 1523 1.536 - - - - - 0.829 0.707 - - guanine nucleotide binding protein (G protein), beta polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-050320-65]
66. whsc1 1701 1.534 - - 0.727 - 0.807 - - - - Wolf-Hirschhorn syndrome candidate 1
67. bcl11ab ENSDARG00000063153 3032 1.527 - - - 0.783 - 0.744 - - - B cell CLL/lymphoma 11Ab [Source:ZFIN;Acc:ZDB-GENE-061009-4]
68. clta ENSDARG00000045618, ENSDARG00000115484 11767 1.527 - - - - - 0.821 0.706 - - clathrin, light chain A [Source:ZFIN;Acc:ZDB-GENE-040426-1986]
69. khsrp ENSDARG00000026489 15738 1.521 - - - - - 0.804 0.717 - - KH-type splicing regulatory protein [Source:ZFIN;Acc:ZDB-GENE-030131-4357]
70. ckap5 ENSDARG00000102674 5068 1.513 0.721 - 0.792 - - - - - - cytoskeleton associated protein 5 [Source:ZFIN;Acc:ZDB-GENE-051120-174]
71. tcf7l1a ENSDARG00000038159 2288 1.509 - - 0.765 - - - 0.744 - - transcription factor 7 like 1a [Source:ZFIN;Acc:ZDB-GENE-980605-30]
72. whsc1l1 8544 1.508 - - - 0.750 - 0.758 - - - Wolf-Hirschhorn syndrome candidate 1-like 1, transcript variant X2
73. asf1bb ENSDARG00000043713 2340 1.508 - - - 0.777 - - 0.731 - - anti-silencing function 1Bb histone chaperone [Source:ZFIN;Acc:ZDB-GENE-040426-2594]
74. nup50 ENSDARG00000017454 4425 1.507 - - - 0.779 - 0.728 - - - nucleoporin 50 [Source:ZFIN;Acc:ZDB-GENE-030131-1689]
75. mex3b ENSDARG00000058369 1867 1.505 - - 0.700 - 0.805 - - - - mex-3 RNA binding family member B [Source:ZFIN;Acc:ZDB-GENE-030131-2628]
76. snrnp70 ENSDARG00000077126 5921 1.505 - - 0.723 - - 0.782 - - - small nuclear ribonucleoprotein 70 (U1) [Source:ZFIN;Acc:ZDB-GENE-040825-2]
77. IM:7163548 IM:7163548 6540 1.504 - - 0.708 - - 0.796 - - -
78. nucks1b ENSDARG00000012777 4468 1.503 - - 0.747 - - - 0.756 - - nuclear casein kinase and cyclin-dependent kinase substrate 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4544]
79. llgl1 ENSDARG00000009693 4205 1.502 - - 0.702 - - - 0.800 - - lethal giant larvae homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-060825-69]
80. fabp7a ENSDARG00000007697 5211 1.5 - - - 0.747 0.753 - - - - fatty acid binding protein 7, brain, a [Source:ZFIN;Acc:ZDB-GENE-000627-1]
81. AL844567.1 AL844567.1 1605 1.496 - - - 0.775 - 0.721 - - -
82. srsf6b ENSDARG00000016783 9926 1.496 - - - - - 0.761 0.735 - - serine/arginine-rich splicing factor 6b [Source:ZFIN;Acc:ZDB-GENE-041219-1]
83. nup62l ENSDARG00000020527, ENSDARG00000111836, ENSDARG00000112620 3763 1.492 - - 0.735 0.757 - - - - - nucleoporin 62 like [Source:ZFIN;Acc:ZDB-GENE-030131-8491]
84. LENG8 ENSDARG00000076805, ENSDARG00000113326 4021 1.489 0.771 - - - - 0.718 - - - leukocyte receptor cluster (LRC) member 8 [Source:ZFIN;Acc:ZDB-GENE-070410-6]
85. uhrf1 ENSDARG00000103409 3282 1.487 - - - 0.744 - 0.743 - - - ubiquitin-like with PHD and ring finger domains 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2039]
86. GATAD2B ENSDARG00000005834 3855 1.486 0.738 - - - - 0.748 - - - GATA zinc finger domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-060503-655]
87. cdca7a ENSDARG00000077620 9345 1.485 - - - - 0.756 0.729 - - - cell division cycle associated 7a [Source:ZFIN;Acc:ZDB-GENE-050417-29]
88. srrm1 ENSDARG00000001244 4972 1.485 - - 0.765 - - 0.720 - - - serine/arginine repetitive matrix 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2789]
89. usp10 ENSDARG00000103422 4247 1.483 - - 0.716 - - - 0.767 - - ubiquitin specific peptidase 10 [Source:ZFIN;Acc:ZDB-GENE-030219-132]
90. wtap ENSDARG00000042642 1779 1.482 - - 0.751 0.731 - - - - - WT1 associated protein [Source:ZFIN;Acc:ZDB-GENE-030131-5990]
91. prpf40a ENSDARG00000058467 6565 1.481 - - - - - 0.727 0.754 - - PRP40 pre-mRNA processing factor 40 homolog A [Source:ZFIN;Acc:ZDB-GENE-030131-274]
92. phactr4b ENSDARG00000032221 1389 1.48 - - 0.715 0.765 - - - - - phosphatase and actin regulator 4b [Source:ZFIN;Acc:ZDB-GENE-040426-1131]
93. srsf3a ENSDARG00000025397, ENSDARG00000100815 11622 1.477 - - 0.707 - - 0.770 - - - serine/arginine-rich splicing factor 3a [Source:ZFIN;Acc:ZDB-GENE-030616-631]
94. carm1 ENSDARG00000018698 5599 1.476 - - - 0.717 - 0.759 - - - coactivator-associated arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040724-77]
95. trip12 ENSDARG00000061397, ENSDARG00000116161 7595 1.476 - - - - - 0.747 0.729 - - thyroid hormone receptor interactor 12 [Source:ZFIN;Acc:ZDB-GENE-041111-262]
96. TAF15 ENSDARG00000070019 5102 1.474 - - 0.771 - - 0.703 - - - TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-061215-102]
97. kdm5c ENSDARG00000006124 4389 1.472 - - - - - 0.754 0.718 - - lysine (K)-specific demethylase 5C [Source:ZFIN;Acc:ZDB-GENE-060810-94]
98. KDM6B KDM6B 10265 1.471 - - 0.758 - - - 0.713 - -
99. slkb ENSDARG00000012574 1099 1.471 - - 0.770 0.701 - - - - - STE20-like kinase b [Source:ZFIN;Acc:ZDB-GENE-030131-1684]
100. arfrp1 ENSDARG00000057857 2840 1.469 0.706 - - - - - 0.763 - - ADP-ribosylation factor related protein 1 [Source:ZFIN;Acc:ZDB-GENE-050227-14]

There are 984 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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