Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for pdpk1b

Gene Name Gene ID Reads Annotation
pdpk1b ENSDARG00000018285 957 3-phosphoinositide dependent protein kinase 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1820]










Genes with expression patterns similar to pdpk1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pdpk1b ENSDARG00000018285 957 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 3-phosphoinositide dependent protein kinase 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1820]
2. C19H16orf80 C19H16orf80 1327 2.384 0.781 - - 0.766 - 0.837 - - -
3. msxe msxe 362 1.761 - - - 0.773 0.988 - - - -
4. gclc ENSDARG00000013095 2146 1.748 - - - 0.783 0.965 - - - - glutamate-cysteine ligase, catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-030131-5056]
5. C1H7orf55 C1H7orf55 2552 1.745 - - - 0.775 0.970 - - - -
6. spag7 ENSDARG00000011555 3224 1.717 - - - - 0.992 - 0.725 - - sperm associated antigen 7 [Source:ZFIN;Acc:ZDB-GENE-040426-1632]
7. ube4b ENSDARG00000037017 8012 1.717 - - - 0.838 0.879 - - - - ubiquitination factor E4B, UFD2 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-020205-1]
8. dnajc15 ENSDARG00000038309 1274 1.71 - 0.729 - - 0.981 - - - - DnaJ (Hsp40) homolog, subfamily C, member 15 [Source:ZFIN;Acc:ZDB-GENE-040801-216]
9. mcts1 ENSDARG00000025972 4662 1.701 - - - - 0.948 - 0.753 - - malignant T cell amplified sequence 1 [Source:ZFIN;Acc:ZDB-GENE-040426-957]
10. FP245444.1 FP245444.1 1922 1.699 - - - - 0.982 - 0.717 - -
11. brms1la ENSDARG00000006235 2011 1.693 - - - 0.734 0.959 - - - - BRMS1 like transcriptional repressor a [Source:ZFIN;Acc:ZDB-GENE-050913-49]
12. pank1b ENSDARG00000010098 3202 1.655 - - - - 0.908 - 0.747 - - pantothenate kinase 1b [Source:ZFIN;Acc:ZDB-GENE-070209-259]
13. fen1 ENSDARG00000011404 3358 1.634 - - - - 0.910 - 0.724 - - flap structure-specific endonuclease 1 [Source:ZFIN;Acc:ZDB-GENE-031112-11]
14. depdc7 232 1.562 0.849 0.713 - - - - - - - DEP domain containing 7, transcript variant X1
15. SACM1L SACM1L 416 1.558 - - - 0.805 - - 0.753 - -
16. zgc:112962 ENSDARG00000069102 431 1.542 - 0.747 - - - 0.795 - - - zgc:112962 [Source:ZFIN;Acc:ZDB-GENE-050410-15]
17. gng12a ENSDARG00000003375 1250 1.541 0.774 - - - - - 0.767 - - guanine nucleotide binding protein (G protein), gamma 12a [Source:ZFIN;Acc:ZDB-GENE-040426-2555]
18. rtkn2 rtkn2 1092 1.522 0.704 - - 0.818 - - - - -
19. nudt1 ENSDARG00000030573 268 1.514 0.712 - - 0.802 - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2757]
20. BX649554.3_1 BX649554.3_1 1071 1.51 - 0.741 - 0.769 - - - - -
21. si:dkey-18f7.2 si:dkey-18f7.2 895 1.501 - 0.780 - - - 0.721 - - -
22. mfsd5 ENSDARG00000015997 570 1.496 0.743 - - 0.753 - - - - - major facilitator superfamily domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-040718-468]
23. mcee ENSDARG00000045428 1107 1.476 - 0.776 - - - - 0.700 - - methylmalonyl CoA epimerase [Source:ZFIN;Acc:ZDB-GENE-050522-368]
24. HIST1H4J_1 HIST1H4J_1 4066 1.471 - - - - 0.768 0.703 - - -
25. polr2k ENSDARG00000075616 2047 1.469 - 0.746 - - - - 0.723 - - polymerase (RNA) II (DNA directed) polypeptide K [Source:ZFIN;Acc:ZDB-GENE-070820-18]
26. r3hcc1l ENSDARG00000089243 1254 1.467 - 0.701 - 0.766 - - - - - R3H domain and coiled-coil containing 1-like [Source:ZFIN;Acc:ZDB-GENE-030131-4156]
27. rad54l2 ENSDARG00000063031 821 1.462 0.745 - - 0.717 - - - - - RAD54 like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3097]
28. zfpl1 ENSDARG00000103453 860 1.441 - - - 0.707 - - 0.734 - - zinc finger protein-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1255]
29. mfap2 ENSDARG00000059367 3774 1.432 - 0.704 - 0.728 - - - - - microfibril associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6710]
30. CR855307.1 ENSDARG00000099628 338 1.431 0.728 0.703 - - - - - - -
31. alg11 ENSDARG00000031202, ENSDARG00000110001 308 1.416 - - - - - 0.708 - - 0.708 asparagine-linked glycosylation 11 (alpha-1,2-mannosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-030131-7282]
32. dbr1 ENSDARG00000056923, ENSDARG00000116603 2196 0.993 - - - - 0.993 - - - - debranching RNA lariats 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2466]
33. pan3 ENSDARG00000031637, ENSDARG00000111004 613 0.993 - - - - 0.993 - - - - poly(A) specific ribonuclease subunit PAN3 [Source:ZFIN;Acc:ZDB-GENE-070928-13]
34. usp16 ENSDARG00000060633 684 0.993 - - - - 0.993 - - - - ubiquitin specific peptidase 16 [Source:ZFIN;Acc:ZDB-GENE-030131-4153]
35. si:dkey-20j1.4 si:dkey-20j1.4 406 0.993 - - - - 0.993 - - - -
36. aldh16a1 ENSDARG00000037935 617 0.993 - - - - 0.993 - - - - aldehyde dehydrogenase 16 family, member A1 [Source:ZFIN;Acc:ZDB-GENE-070112-2062]
37. lig4 ENSDARG00000060620 369 0.992 - - - - 0.992 - - - - ligase IV, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-070820-10]
38. FOXL2 239 0.992 - - - - 0.992 - - - - forkhead box L2, transcript variant X1
39. myl2b ENSDARG00000053424 226 0.992 - - - - 0.992 - - - - myosin, light chain 2b, regulatory, cardiac, slow [Source:ZFIN;Acc:ZDB-GENE-060331-137]
40. nefma ENSDARG00000021351 790 0.992 - - - - 0.992 - - - - neurofilament, medium polypeptide a [Source:ZFIN;Acc:ZDB-GENE-050522-205]
41. lgi1a ENSDARG00000020493 1218 0.992 - - - - 0.992 - - - - leucine-rich, glioma inactivated 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1731]
42. med13b ENSDARG00000003910 1143 0.992 - - - - 0.992 - - - - mediator complex subunit 13b [Source:ZFIN;Acc:ZDB-GENE-030131-3529]
43. ercc6 ENSDARG00000075612 1175 0.992 - - - - 0.992 - - - - excision repair cross-complementation group 6 [Source:ZFIN;Acc:ZDB-GENE-070228-1]
44. lrch2 ENSDARG00000075580, ENSDARG00000116418 255 0.992 - - - - 0.992 - - - - leucine-rich repeats and calponin homology (CH) domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-080114-1]
45. ccr10 ENSDARG00000040643 255 0.992 - - - - 0.992 - - - - chemokine (C-C motif) receptor 10 [Source:ZFIN;Acc:ZDB-GENE-040718-424]
46. fam193b ENSDARG00000102831 442 0.992 - - - - 0.992 - - - - family with sequence similarity 193, member B [Source:ZFIN;Acc:ZDB-GENE-111102-1]
47. pfkpb ENSDARG00000012801 223 0.992 - - - - 0.992 - - - - phosphofructokinase, platelet b [Source:ZFIN;Acc:ZDB-GENE-070912-634]
48. gorab ENSDARG00000042031 483 0.991 - - - - 0.991 - - - - golgin, rab6-interacting [Source:ZFIN;Acc:ZDB-GENE-040426-1384]
49. cenpi ENSDARG00000052565 482 0.991 - - - - 0.991 - - - - centromere protein I [Source:ZFIN;Acc:ZDB-GENE-060810-127]
50. slc2a15b ENSDARG00000053269 899 0.991 - - - - 0.991 - - - - solute carrier family 2 (facilitated glucose transporter), member 15b [Source:ZFIN;Acc:ZDB-GENE-050508-1]
51. atxn7l3 ENSDARG00000029331 531 0.991 - - - - 0.991 - - - - ataxin 7-like 3 [Source:ZFIN;Acc:ZDB-GENE-030616-253]
52. TUSC5_1 TUSC5_1 320 0.991 - - - - 0.991 - - - -
53. ago4 ENSDARG00000100854 496 0.991 - - - - 0.991 - - - - argonaute RISC catalytic component 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5357]
54. ccdc28b ENSDARG00000011222 528 0.991 - - - - 0.991 - - - - coiled-coil domain containing 28B [Source:ZFIN;Acc:ZDB-GENE-060208-3]
55. dopey1 438 0.991 - - - - 0.991 - - - - dopey family member 1, transcript variant X4
56. clu ENSDARG00000010434 498 0.991 - - - - 0.991 - - - - clusterin [Source:ZFIN;Acc:ZDB-GENE-040426-1774]
57. smurf1 ENSDARG00000016086 878 0.99 - - - - 0.990 - - - - SMAD specific E3 ubiquitin protein ligase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2744]
58. hey2 ENSDARG00000013441 540 0.99 - - - - 0.990 - - - - hes-related family bHLH transcription factor with YRPW motif 2 [Source:ZFIN;Acc:ZDB-GENE-000526-1]
59. TRAPPC10 ENSDARG00000098118 954 0.99 - - - - 0.990 - - - - trafficking protein particle complex 10 [Source:ZFIN;Acc:ZDB-GENE-131115-1]
60. larp7 ENSDARG00000017315 1194 0.99 - - - - 0.990 - - - - La ribonucleoprotein domain family, member 7 [Source:ZFIN;Acc:ZDB-GENE-030131-6896]
61. cuedc2 ENSDARG00000039365 484 0.99 - - - - 0.990 - - - - CUE domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6283]
62. BX005008.2 BX005008.2 708 0.99 - - - - 0.990 - - - -
63. wdr24 ENSDARG00000025507 505 0.99 - - - - 0.990 - - - - WD repeat domain 24 [Source:ZFIN;Acc:ZDB-GENE-040426-2012]
64. pvalb6 ENSDARG00000009311, ENSDARG00000113947 248 0.99 - - - - 0.990 - - - - parvalbumin 6 [Source:ZFIN;Acc:ZDB-GENE-040912-95]
65. aspg ENSDARG00000052942 1406 0.989 - - - - 0.989 - - - - asparaginase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-070820-14]
66. exoc3l4 ENSDARG00000058180 923 0.989 - - - - 0.989 - - - - exocyst complex component 3-like 4 [Source:ZFIN;Acc:ZDB-GENE-081028-71]
67. si:ch211-150o23.2 ENSDARG00000092746 788 0.989 - - - - 0.989 - - - - si:ch211-150o23.2 [Source:ZFIN;Acc:ZDB-GENE-060503-386]
68. rca2.1 ENSDARG00000056075 3410 0.989 - - - - 0.989 - - - - regulator of complement activation group 2 gene 1 [Source:ZFIN;Acc:ZDB-GENE-050320-60]
69. zswim8 ENSDARG00000069397, ENSDARG00000112914 2378 0.989 - - - - 0.989 - - - - zinc finger, SWIM-type containing 8 [Source:ZFIN;Acc:ZDB-GENE-050320-59]
70. katnbl1 ENSDARG00000042522 1086 0.989 - - - - 0.989 - - - - katanin p80 subunit B-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4155]
71. tab1 ENSDARG00000036613 445 0.989 - - - - 0.989 - - - - TGF-beta activated kinase 1/MAP3K7 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060628-1]
72. CR759921.2 CR759921.2 583 0.988 - - - - 0.988 - - - -
73. hvcn1 ENSDARG00000040338 571 0.988 - - - - 0.988 - - - - hydrogen voltage-gated channel 1 [Source:ZFIN;Acc:ZDB-GENE-040718-36]
74. bmi1a ENSDARG00000006010 2061 0.988 - - - - 0.988 - - - - bmi1 polycomb ring finger oncogene 1a [Source:ZFIN;Acc:ZDB-GENE-030131-224]
75. tmem88a ENSDARG00000056920 536 0.988 - - - - 0.988 - - - - transmembrane protein 88 a [Source:ZFIN;Acc:ZDB-GENE-040426-1808]
76. GRAMD4 GRAMD4 1967 0.988 - - - - 0.988 - - - -
77. fut8 fut8 652 0.988 - - - - 0.988 - - - -
78. bloc1s3 ENSDARG00000068828 502 0.988 - - - - 0.988 - - - - biogenesis of lysosomal organelles complex-1, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-050913-10]
79. plrg1 ENSDARG00000037283, ENSDARG00000110921 1552 0.988 - - - - 0.988 - - - - pleiotropic regulator 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2787]
80. comtb ENSDARG00000025679, ENSDARG00000111678 1692 0.988 - - - - 0.988 - - - - catechol-O-methyltransferase b [Source:ZFIN;Acc:ZDB-GENE-040724-164]
81. ypel5 ENSDARG00000088929 1011 0.987 - - - - 0.987 - - - - yippee-like 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1220]
82. toporsb ENSDARG00000105028 1898 0.987 - - - - 0.987 - - - - topoisomerase I binding, arginine/serine-rich b [Source:ZFIN;Acc:ZDB-GENE-110728-3]
83. mnat1 ENSDARG00000002077 287 0.987 - - - - 0.987 - - - - MNAT CDK-activating kinase assembly factor 1 [Source:ZFIN;Acc:ZDB-GENE-041010-203]
84. pip5k1bb ENSDARG00000006508 2812 0.987 - - - - 0.987 - - - - phosphatidylinositol-4-phosphate 5-kinase, type I, beta b [Source:ZFIN;Acc:ZDB-GENE-040912-141]
85. sin3b ENSDARG00000062472 2025 0.987 - - - - 0.987 - - - - SIN3 transcription regulator family member B [Source:ZFIN;Acc:ZDB-GENE-030131-8264]
86. prdm16 prdm16 1346 0.986 - - - - 0.986 - - - -
87. lin54 ENSDARG00000063194 2583 0.986 - - - - 0.986 - - - - lin-54 DREAM MuvB core complex component [Source:ZFIN;Acc:ZDB-GENE-060929-440]
88. MANBAL ENSDARG00000059853 636 0.986 - - - - 0.986 - - - - mannosidase beta like [Source:ZFIN;Acc:ZDB-GENE-161222-1]
89. aatf ENSDARG00000025467, ENSDARG00000109548 796 0.986 - - - - 0.986 - - - - apoptosis antagonizing transcription factor [Source:ZFIN;Acc:ZDB-GENE-030131-9654]
90. sox1a ENSDARG00000069866, ENSDARG00000110682, ENSDARG00000114571 576 0.986 - - - - 0.986 - - - - SRY (sex determining region Y)-box 1a [Source:ZFIN;Acc:ZDB-GENE-040718-186]
91. tbl1x ENSDARG00000060438 1386 0.986 - - - - 0.986 - - - - transducin beta like 1 X-linked [Source:ZFIN;Acc:ZDB-GENE-070209-131]
92. dlg3_1 ENSDARG00000076796, ENSDARG00000111101 1542 0.985 - - - - 0.985 - - - - discs, large homolog 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050208-93]
93. st8sia6 ENSDARG00000021195 2244 0.985 - - - - 0.985 - - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 [Source:ZFIN;Acc:ZDB-GENE-060322-9]
94. mrrf ENSDARG00000034174, ENSDARG00000115754 791 0.985 - - - - 0.985 - - - - mitochondrial ribosome recycling factor [Source:ZFIN;Acc:ZDB-GENE-040704-12]
95. dvl3a ENSDARG00000015707 1132 0.985 - - - - 0.985 - - - - dishevelled segment polarity protein 3a [Source:ZFIN;Acc:ZDB-GENE-010319-1]
96. msh2 ENSDARG00000018022, ENSDARG00000115185 1301 0.985 - - - - 0.985 - - - - mutS homolog 2 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-040426-2932]
97. rab5b ENSDARG00000016059, ENSDARG00000114966 1252 0.985 - - - - 0.985 - - - - RAB5B, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040426-2593]
98. CU633999.1 ENSDARG00000098197 2880 0.985 - - - - 0.985 - - - -
99. eng1b eng1b 2544 0.985 - - - - 0.985 - - - -
100. hspa4b ENSDARG00000018989, ENSDARG00000112727, ENSDARG00000116230 7043 0.984 - - - - 0.984 - - - - heat shock protein 4b [Source:ZFIN;Acc:ZDB-GENE-030131-6018]

There are 1043 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA