Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for pdp2

Gene Name Gene ID Reads Annotation
pdp2 ENSDARG00000058571, ENSDARG00000115915 464 putative pyruvate dehydrogenase phosphatase isoenzyme 2 [Source:ZFIN;Acc:ZDB-GENE-000921-2]










Genes with expression patterns similar to pdp2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pdp2 ENSDARG00000058571, ENSDARG00000115915 464 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 putative pyruvate dehydrogenase phosphatase isoenzyme 2 [Source:ZFIN;Acc:ZDB-GENE-000921-2]
2. mamdc1 mamdc1 156 2.355 - 0.731 - - 0.766 0.858 - - -
3. depdc1a ENSDARG00000018165, ENSDARG00000114097 1958 2.257 - - - - - 0.825 0.731 0.701 - DEP domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9827]
4. SLC9B1 SLC9B1 137 1.86 - 0.924 - - - 0.936 - - -
5. si:ch211-240g9.1 36 1.854 - 0.924 - - - 0.930 - - - si:ch211-240g9.1
6. DENND6A DENND6A 648 1.794 - - - - - 0.863 - 0.931 -
7. FAM126B 588 1.772 - - - - - 0.931 - 0.841 - family with sequence similarity 126 member B
8. zgc:158291 ENSDARG00000044375, ENSDARG00000111929 621 1.77 - 0.816 - - - 0.954 - - - zgc:158291 [Source:ZFIN;Acc:ZDB-GENE-061215-70]
9. uros ENSDARG00000027491 1147 1.739 - - - - - 0.949 0.790 - - uroporphyrinogen III synthase [Source:ZFIN;Acc:ZDB-GENE-040323-2]
10. stmn4 ENSDARG00000030106 518 1.738 - - - - - 0.867 - 0.871 - stathmin-like 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2732]
11. phf16 phf16 1116 1.734 - - - - - - 0.861 0.873 -
12. nin ENSDARG00000060298 1558 1.715 - - - - - 0.896 0.819 - - ninein (GSK3B interacting protein) [Source:ZFIN;Acc:ZDB-GENE-070725-1]
13. CR855306.1 ENSDARG00000099475 102 1.711 - - - - - 0.892 0.819 - -
14. CCDC115 ENSDARG00000033533, ENSDARG00000109365 353 1.704 - - - - - 0.860 - 0.844 - coiled-coil domain containing 115 [Source:ZFIN;Acc:ZDB-GENE-050227-20]
15. SH2B2 ENSDARG00000090421 245 1.696 - - - - - 0.818 - 0.878 - SH2B adaptor protein 2 [Source:HGNC Symbol;Acc:HGNC:17381]
16. si:ch211-194k22.8 ENSDARG00000096711 1318 1.688 - - - - - 0.927 0.761 - - si:ch211-194k22.8 [Source:ZFIN;Acc:ZDB-GENE-030131-1820]
17. rad54b ENSDARG00000092134 231 1.684 - - - - - 0.929 0.755 - - RAD54 homolog B [Source:ZFIN;Acc:ZDB-GENE-060810-50]
18. atl1 ENSDARG00000060481 251 1.683 - - - - - 0.850 - 0.833 - atlastin GTPase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8003]
19. kif18a ENSDARG00000008022 546 1.67 - - - - 0.753 0.917 - - - kinesin family member 18A [Source:ZFIN;Acc:ZDB-GENE-040426-862]
20. FAM163A ENSDARG00000093021 86 1.669 - 0.861 - - - 0.808 - - - family with sequence similarity 163 member A [Source:HGNC Symbol;Acc:HGNC:28274]
21. myl9a ENSDARG00000038123 1207 1.668 - 0.924 - - - - 0.744 - - myosin, light chain 9a, regulatory [Source:ZFIN;Acc:ZDB-GENE-041010-120]
22. GSG2 GSG2 1162 1.658 - - - - - 0.869 0.789 - -
23. ppm1f ENSDARG00000005786, ENSDARG00000109839 25 1.656 - 0.710 - - - 0.946 - - - protein phosphatase, Mg2+/Mn2+ dependent, 1F [Source:ZFIN;Acc:ZDB-GENE-051128-2]
24. XKR7 ENSDARG00000026333 175 1.654 - 0.710 - - - 0.944 - - - XK, Kell blood group complex subunit-related family, member 7 [Source:ZFIN;Acc:ZDB-GENE-051113-336]
25. ppp1r15a ENSDARG00000069135 871 1.654 - - - - - 0.877 - 0.777 - protein phosphatase 1, regulatory subunit 15A [Source:ZFIN;Acc:ZDB-GENE-030131-4408]
26. adck1 ENSDARG00000062561 22 1.652 - - - - - 0.919 0.733 - - aarF domain containing kinase 1 [Source:ZFIN;Acc:ZDB-GENE-080401-5]
27. sgms2 57 1.652 - 0.710 - - - 0.942 - - - sphingomyelin synthase 2, transcript variant X1
28. zbtb48 ENSDARG00000039263 251 1.649 - 0.704 - - - 0.945 - - - zinc finger and BTB domain containing 48 [Source:ZFIN;Acc:ZDB-GENE-030131-4450]
29. tapbp tapbp 70 1.648 - - - - - 0.906 0.742 - -
30. syt13 ENSDARG00000012306 298 1.648 - 0.705 - - - 0.943 - - - synaptotagmin XIII [Source:ZFIN;Acc:ZDB-GENE-050417-135]
31. B4GALNT1 B4GALNT1 352 1.646 - 0.819 - - - 0.827 - - -
32. cacnb2a ENSDARG00000099045 374 1.646 - - - - 0.762 - - 0.884 - calcium channel, voltage-dependent, beta 2a [Source:ZFIN;Acc:ZDB-GENE-080808-7]
33. KCNIP4 ENSDARG00000088100 86 1.646 - 0.710 - - - 0.936 - - - potassium voltage-gated channel interacting protein 4 [Source:HGNC Symbol;Acc:HGNC:30083]
34. SSBP2 ENSDARG00000099727 22 1.643 - 0.710 - - - 0.933 - - - single-stranded DNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-090312-197]
35. atat1 ENSDARG00000004472 700 1.643 - 0.710 - - - 0.933 - - - alpha tubulin acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2120]
36. CABZ01038313.1 CABZ01038313.1 79 1.643 - 0.710 - - - 0.933 - - -
37. zgc:174697 zgc:174697 128 1.642 - 0.710 - - - 0.932 - - -
38. plk4 ENSDARG00000004576 688 1.637 - - - - - 0.920 0.717 - - polo-like kinase 4 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030619-14]
39. nedd4l ENSDARG00000060006 1669 1.637 - - - - - 0.843 - 0.794 - neural precursor cell expressed, developmentally down-regulated 4-like [Source:ZFIN;Acc:ZDB-GENE-051118-2]
40. MSL1_1 MSL1_1 2365 1.636 - - - - - 0.906 0.730 - -
41. dctn5 ENSDARG00000003573 1100 1.635 - - - - - 0.912 0.723 - - dynactin 5 [Source:ZFIN;Acc:ZDB-GENE-040718-201]
42. mapk8ip2 ENSDARG00000063157 467 1.634 - 0.718 - - - 0.916 - - - mitogen-activated protein kinase 8 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-070705-326]
43. cnrip1a ENSDARG00000091683 1491 1.633 - 0.752 - - - 0.881 - - - cannabinoid receptor interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-126]
44. thsd7ba ENSDARG00000095022 231 1.633 - 0.754 - - - 0.879 - - - thrombospondin, type I, domain containing 7Ba [Source:ZFIN;Acc:ZDB-GENE-070621-2]
45. GANAB_2 GANAB_2 3210 1.632 - - - - - 0.878 0.754 - -
46. popdc3 ENSDARG00000058551 538 1.631 - - - - - 0.780 0.851 - - popeye domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040624-10]
47. sox2 ENSDARG00000070913 2763 1.631 - 0.718 - - - 0.913 - - - SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
48. PPFIA3 ENSDARG00000077053 310 1.63 - 0.710 - - - 0.920 - - - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3 [Source:ZFIN;Acc:ZDB-GENE-100311-3]
49. ryk ENSDARG00000007231 1611 1.629 0.741 - - - - 0.888 - - - receptor-like tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-070209-277]
50. DST ENSDARG00000101858 4395 1.628 - - - - - - 0.824 0.804 - dystonin [Source:HGNC Symbol;Acc:HGNC:1090]
51. prpf31 ENSDARG00000095904 526 1.627 - 0.777 - - - 0.850 - - - PRP31 pre-mRNA processing factor 31 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1561]
52. slc12a5b ENSDARG00000078187 329 1.625 - 0.710 - - - - - 0.915 - solute carrier family 12 (potassium/chloride transporter), member 5b [Source:ZFIN;Acc:ZDB-GENE-080707-1]
53. nadl1.2 695 1.624 - - - - 0.746 0.878 - - - neural adhesion molecule L1.2, transcript variant X1
54. TTBK1_1 TTBK1_1 132 1.623 - - - - 0.762 0.861 - - -
55. mirlet7a-1 105 1.62 0.754 - - - - 0.866 - - - microRNA let7a-1
56. arl6ip4 ENSDARG00000105036, ENSDARG00000110324, ENSDARG00000116805 1142 1.615 - - - - - 0.780 0.835 - - ADP-ribosylation factor-like 6 interacting protein 4 [Source:ZFIN;Acc:ZDB-GENE-050522-405]
57. ift57 ENSDARG00000021022 288 1.613 - - - - - 0.851 0.762 - - intraflagellar transport 57 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-040614-1]
58. zcchc10 ENSDARG00000091092 1333 1.612 - - - - - 0.868 0.744 - - zinc finger, CCHC domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-030131-6172]
59. TRHDE_1 TRHDE_1 102 1.611 - - - - - - 0.738 0.873 -
60. qrich1 ENSDARG00000019797, ENSDARG00000111720, ENSDARG00000113429 1177 1.61 - - - - - 0.837 0.773 - - glutamine-rich 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8204]
61. trhr2 ENSDARG00000093901, ENSDARG00000114177 67 1.608 - - - - 0.723 0.885 - - - thyrotropin releasing hormone receptor 2 [Source:ZFIN;Acc:ZDB-GENE-050419-193]
62. LPHN3 LPHN3 195 1.608 - - - - - 0.746 - 0.862 -
63. CR847906.1 ENSDARG00000099493 88 1.597 - 0.710 - - - 0.887 - - - protein NLRC3-like [Source:NCBI gene;Acc:571651]
64. hs3st3l ENSDARG00000059903 184 1.596 - 0.730 - - - 0.866 - - - heparan sulfate (glucosamine) 3-O-sulfotransferase 3-like [Source:ZFIN;Acc:ZDB-GENE-070202-6]
65. gpr144 gpr144 479 1.592 - 0.759 - - - 0.833 - - -
66. si:ch73-21g5.7 ENSDARG00000093156 9412 1.592 - 0.784 - - - 0.808 - - - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
67. efna2 efna2 428 1.591 - - - - - 0.784 - 0.807 -
68. igdcc4 ENSDARG00000076919 1303 1.591 - - - - - 0.735 - 0.856 - immunoglobulin superfamily, DCC subclass, member 4 [Source:ZFIN;Acc:ZDB-GENE-080327-32]
69. CABZ01081749.1 CABZ01081749.1 637 1.591 - - - - - - 0.763 0.828 -
70. sprb ENSDARG00000058553 1694 1.589 - 0.828 - - - 0.761 - - - sepiapterin reductase b [Source:ZFIN;Acc:ZDB-GENE-070719-1]
71. CABZ01087562.1 CABZ01087562.1 80 1.589 - 0.710 - - - - - 0.879 -
72. mapk12b ENSDARG00000006409 2246 1.588 - 0.758 - - - 0.830 - - - mitogen-activated protein kinase 12b [Source:ZFIN;Acc:ZDB-GENE-041210-123]
73. bsk146 ENSDARG00000099069 274 1.583 - 0.710 - - - 0.873 - - - brain specific kinase 146 [Source:ZFIN;Acc:ZDB-GENE-060313-3]
74. cpeb1a ENSDARG00000045932 81 1.579 - 0.769 - - - 0.810 - - - cytoplasmic polyadenylation element binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-080723-42]
75. trappc12 ENSDARG00000060101 809 1.579 - - - - - 0.807 - 0.772 - trafficking protein particle complex 12 [Source:ZFIN;Acc:ZDB-GENE-070112-1282]
76. atp2b3b ENSDARG00000023445 1424 1.578 - 0.842 - - - 0.736 - - - ATPase plasma membrane Ca2+ transporting 3b [Source:ZFIN;Acc:ZDB-GENE-080409-2]
77. CT030012.1 ENSDARG00000105611 154 1.577 - - - - - 0.793 0.784 - -
78. ndc1 ENSDARG00000021120 2417 1.568 - - - - - - 0.741 0.827 - NDC1 transmembrane nucleoporin [Source:ZFIN;Acc:ZDB-GENE-030131-7176]
79. rfc5 ENSDARG00000035634 974 1.566 - - - - - - 0.793 0.773 - replication factor C (activator 1) 5 [Source:ZFIN;Acc:ZDB-GENE-040907-1]
80. TUSC5 TUSC5 1436 1.566 - 0.823 - - - 0.743 - - -
81. zgc:194470 zgc:194470 210 1.561 - 0.723 - - - - - 0.838 -
82. RGS9BP ENSDARG00000086756 65 1.559 - 0.710 - - - 0.849 - - - regulator of G protein signaling 9 binding protein [Source:HGNC Symbol;Acc:HGNC:30304]
83. syt9a ENSDARG00000003994 298 1.559 - 0.710 - - - 0.849 - - - synaptotagmin IXa [Source:ZFIN;Acc:ZDB-GENE-031002-18]
84. kctd16a ENSDARG00000004648, ENSDARG00000114292, ENSDARG00000117199 80 1.554 - 0.710 - - - 0.844 - - - potassium channel tetramerization domain containing 16a [Source:ZFIN;Acc:ZDB-GENE-060117-1]
85. mtx1a ENSDARG00000025500 275 1.552 0.731 - - - - 0.821 - - - metaxin 1a [Source:ZFIN;Acc:ZDB-GENE-060606-2]
86. LRP3 ENSDARG00000008485 1401 1.551 - 0.710 - - 0.841 - - - - low density lipoprotein receptor-related protein 3 [Source:ZFIN;Acc:ZDB-GENE-080116-3]
87. CABZ01048373.1 CABZ01048373.1 81 1.547 - 0.793 - - - - 0.754 - -
88. CABZ01065506.1 CABZ01065506.1 204 1.545 - 0.710 - - - 0.835 - - -
89. MAP6 MAP6 643 1.544 - 0.757 - - - 0.787 - - -
90. upf3a ENSDARG00000069297, ENSDARG00000111067 196 1.541 - 0.736 - - - 0.805 - - - UPF3A, regulator of nonsense mediated mRNA decay [Source:ZFIN;Acc:ZDB-GENE-060721-2]
91. pax3a ENSDARG00000010192 626 1.54 - 0.816 - - - 0.724 - - - paired box 3a [Source:ZFIN;Acc:ZDB-GENE-980526-52]
92. kctd13 ENSDARG00000044769, ENSDARG00000112000 569 1.539 - - - - - 0.821 - 0.718 - potassium channel tetramerization domain containing 13 [Source:ZFIN;Acc:ZDB-GENE-060825-162]
93. ITGB1BP2 ENSDARG00000030176 2472 1.536 - - - - - 0.744 - 0.792 - integrin subunit beta 1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:6154]
94. CR339053.3 CR339053.3 244 1.533 - - - - - 0.820 0.713 - -
95. pcsk1nl ENSDARG00000076170 1232 1.53 - 0.785 - - - 0.745 - - - proprotein convertase subtilisin/kexin type 1 inhibitor, like [Source:ZFIN;Acc:ZDB-GENE-090427-2]
96. st18 663 1.528 - 0.755 - - - 0.773 - - - suppression of tumorigenicity 18, zinc finger
97. ttc9b ENSDARG00000068421 251 1.524 - 0.769 - - - 0.755 - - - tetratricopeptide repeat domain 9B [Source:ZFIN;Acc:ZDB-GENE-050419-67]
98. gpsm2 ENSDARG00000017311, ENSDARG00000113810 1001 1.522 - - - - - - 0.766 0.756 - G protein signaling modulator 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1169]
99. si:dkey-182g1.2 ENSDARG00000052680, ENSDARG00000109368 147 1.52 0.706 - - - - - 0.814 - - si:dkey-182g1.2 [Source:ZFIN;Acc:ZDB-GENE-060503-619]
100. dhrs13l1 ENSDARG00000098746 102 1.518 - - - - - 0.787 0.731 - - dehydrogenase/reductase (SDR family) member 13 like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1907]

There are 2175 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA