Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for pdlim5b

Gene Name Gene ID Reads Annotation
pdlim5b ENSDARG00000027600 4252 PDZ and LIM domain 5b [Source:ZFIN;Acc:ZDB-GENE-040426-908]










Genes with expression patterns similar to pdlim5b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pdlim5b ENSDARG00000027600 4252 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 PDZ and LIM domain 5b [Source:ZFIN;Acc:ZDB-GENE-040426-908]
2. si:ch211-160e1.5 5586 2.96 - 0.975 - - - 0.994 0.991 - - si:ch211-160e1.5
3. sf3b2 ENSDARG00000018049 4675 2.484 0.869 0.771 - - 0.844 - - - - splicing factor 3b, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-070928-1]
4. gcn1l1 gcn1l1 6031 1.991 - - - - - 0.991 1.000 - -
5. sf3b4 ENSDARG00000018574 7470 1.984 0.995 - - - - 0.989 - - - splicing factor 3b, subunit 4 [Source:ZFIN;Acc:ZDB-GENE-020419-22]
6. mpi ENSDARG00000030786 3052 1.98 0.994 - - - - 0.986 - - - mannose phosphate isomerase [Source:ZFIN;Acc:ZDB-GENE-050904-6]
7. ndufv2 ENSDARG00000013044 3758 1.976 0.993 - - - - 0.983 - - - NADH:ubiquinone oxidoreductase core subunit V2 [Source:ZFIN;Acc:ZDB-GENE-040426-1713]
8. vac14 ENSDARG00000014303 941 1.972 0.981 - - - - 0.991 - - - vac14 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040912-82]
9. atp6ap1b ENSDARG00000037153 3970 1.966 - 0.967 - - - - 0.999 - - ATPase H+ transporting accessory protein 1b [Source:ZFIN;Acc:ZDB-GENE-020423-2]
10. ABHD12B ABHD12B 1877 1.961 0.964 - - - - - 0.997 - -
11. ist1 ENSDARG00000051888 4536 1.96 0.964 - - - - - 0.996 - - increased sodium tolerance 1 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-179]
12. rtf1 ENSDARG00000008947 6596 1.954 - 0.955 - - - - 0.999 - - RTF1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-030131-6778]
13. lta4h ENSDARG00000006029, ENSDARG00000112240 3146 1.946 0.995 0.951 - - - - - - - leukotriene A4 hydrolase [Source:ZFIN;Acc:ZDB-GENE-040426-2477]
14. PSIP1 PSIP1 5252 1.945 - 0.961 - - - 0.984 - - -
15. ivd ENSDARG00000042853, ENSDARG00000112920 1526 1.945 0.995 0.950 - - - - - - - isovaleryl-CoA dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030616-262]
16. BRCC3 ENSDARG00000098242 1123 1.943 - 0.951 - - - 0.992 - - - BRCA1/BRCA2-containing complex, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-100215-1]
17. wdr5 ENSDARG00000016903 4834 1.935 - 0.951 - - - 0.984 - - - WD repeat domain 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2082]
18. txnipa ENSDARG00000036107 8863 1.931 0.986 - - - - 0.945 - - - thioredoxin interacting protein a [Source:ZFIN;Acc:ZDB-GENE-030804-10]
19. pdha1a ENSDARG00000012387, ENSDARG00000116841 8358 1.927 0.980 0.947 - - - - - - - pyruvate dehydrogenase E1 alpha 1 subunit a [Source:ZFIN;Acc:ZDB-GENE-040426-2719]
20. srp72 ENSDARG00000014139 5221 1.926 0.949 0.977 - - - - - - - signal recognition particle 72 [Source:ZFIN;Acc:ZDB-GENE-030131-5546]
21. jagn1b ENSDARG00000014995 2063 1.88 - - - - 0.884 - 0.996 - - jagunal homolog 1b [Source:ZFIN;Acc:ZDB-GENE-040801-103]
22. ndufa11 ENSDARG00000042777 2757 1.879 - - - - 0.893 0.986 - - - NADH:ubiquinone oxidoreductase subunit A11 [Source:ZFIN;Acc:ZDB-GENE-040426-1631]
23. naa15a ENSDARG00000003213 5889 1.875 0.993 - - - 0.882 - - - - N(alpha)-acetyltransferase 15, NatA auxiliary subunit a [Source:ZFIN;Acc:ZDB-GENE-030131-2392]
24. snrpc ENSDARG00000009871 9567 1.875 - 0.913 - - - 0.962 - - - small nuclear ribonucleoprotein polypeptide C [Source:ZFIN;Acc:ZDB-GENE-020419-26]
25. ubc ENSDARG00000102632 36050 1.866 0.975 - - - - - 0.891 - - ubiquitin C [Source:ZFIN;Acc:ZDB-GENE-061110-88]
26. supt6h ENSDARG00000006524 3221 1.865 0.994 - - - 0.871 - - - - SPT6 homolog, histone chaperone [Source:ZFIN;Acc:ZDB-GENE-030131-7949]
27. padi2 ENSDARG00000044167 6765 1.863 - 0.938 - - - 0.925 - - - peptidyl arginine deiminase, type II [Source:ZFIN;Acc:ZDB-GENE-031116-67]
28. cenpf ENSDARG00000055133 5267 1.861 - - - - 0.861 - 1.000 - - centromere protein F [Source:ZFIN;Acc:ZDB-GENE-041111-205]
29. nxf1 ENSDARG00000055076 3251 1.86 0.991 - - - 0.869 - - - - nuclear RNA export factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2585]
30. zswim8 ENSDARG00000069397, ENSDARG00000112914 2378 1.847 - 0.956 - - 0.891 - - - - zinc finger, SWIM-type containing 8 [Source:ZFIN;Acc:ZDB-GENE-050320-59]
31. ddi2 ENSDARG00000006477 4190 1.844 0.974 - - - 0.870 - - - - DNA-damage inducible protein 2 [Source:ZFIN;Acc:ZDB-GENE-031030-15]
32. capn2b ENSDARG00000055592 5431 1.839 - 0.947 - - 0.892 - - - - calpain 2, (m/II) large subunit b [Source:ZFIN;Acc:ZDB-GENE-050522-84]
33. mcts1 ENSDARG00000025972 4662 1.837 - - - - 0.848 0.989 - - - malignant T cell amplified sequence 1 [Source:ZFIN;Acc:ZDB-GENE-040426-957]
34. pno1 ENSDARG00000008502 4547 1.837 0.993 - - - 0.844 - - - - partner of NOB1 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1419]
35. ube2v1 ENSDARG00000041875 5739 1.833 - - - - 0.849 0.984 - - - ubiquitin-conjugating enzyme E2 variant 1 [Source:ZFIN;Acc:ZDB-GENE-051030-102]
36. spag7 ENSDARG00000011555 3224 1.83 - 0.929 - - 0.901 - - - - sperm associated antigen 7 [Source:ZFIN;Acc:ZDB-GENE-040426-1632]
37. marcksl1a ENSDARG00000039034 37303 1.82 - - - - - 0.857 0.963 - - MARCKS-like 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2146]
38. rab5c ENSDARG00000026712 4733 1.81 - 0.946 - - 0.864 - - - - RAB5C, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-031118-30]
39. actc1a ENSDARG00000042535, ENSDARG00000076126, ENSDARG00000116925 6499 1.799 0.962 - - - - 0.837 - - - actin, alpha, cardiac muscle 1a [Source:ZFIN;Acc:ZDB-GENE-040520-4]
40. brd3b ENSDARG00000100129 6387 1.784 0.986 - - - 0.798 - - - - bromodomain containing 3b [Source:ZFIN;Acc:ZDB-GENE-030131-5316]
41. pank1b ENSDARG00000010098 3202 1.777 - 0.973 - - 0.804 - - - - pantothenate kinase 1b [Source:ZFIN;Acc:ZDB-GENE-070209-259]
42. tomm22 ENSDARG00000045146, ENSDARG00000109761 3545 1.765 - 0.912 - - 0.853 - - - - translocase of outer mitochondrial membrane 22 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-9810]
43. zgc:100919 zgc:100919 7746 1.762 0.990 0.772 - - - - - - -
44. evpla ENSDARG00000019808 7565 1.761 0.799 - - - - 0.962 - - - envoplakin a [Source:ZFIN;Acc:ZDB-GENE-030829-19]
45. dct ENSDARG00000006008 2466 1.754 - - - - - 0.755 0.999 - - dopachrome tautomerase [Source:ZFIN;Acc:ZDB-GENE-000508-1]
46. abi1a ENSDARG00000010155 5631 1.748 - - - - 0.850 0.898 - - - abl-interactor 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1701]
47. ociad1 ENSDARG00000052334 2797 1.742 - 0.754 - - - 0.988 - - - OCIA domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1100]
48. tmod4 ENSDARG00000020890 17436 1.739 0.801 - - - - - 0.938 - - tropomodulin 4 (muscle) [Source:ZFIN;Acc:ZDB-GENE-991019-9]
49. hnrpdl 14288 1.731 - 0.828 - - - 0.903 - - - heterogeneous nuclear ribonucleoprotein D-like, transcript variant X2
50. eva1a ENSDARG00000061405 896 1.722 - - - 0.731 - 0.991 - - - eva-1 homolog A (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-060929-200]
51. hypk ENSDARG00000059725 20584 1.719 0.872 - - - - 0.847 - - - huntingtin interacting protein K [Source:ZFIN;Acc:ZDB-GENE-080515-6]
52. srsf3b ENSDARG00000059360 14888 1.718 0.966 - - - 0.752 - - - - serine/arginine-rich splicing factor 3b [Source:ZFIN;Acc:ZDB-GENE-071005-2]
53. eif4ebp2 ENSDARG00000031819 13168 1.711 - 0.957 - - 0.754 - - - - eukaryotic translation initiation factor 4E binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-031118-83]
54. dars ENSDARG00000070043 6854 1.704 - 0.913 - - 0.791 - - - - aspartyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-061110-135]
55. prkar2aa ENSDARG00000033184 14704 1.7 0.818 - - - - - 0.882 - - protein kinase, cAMP-dependent, regulatory, type II, alpha A [Source:ZFIN;Acc:ZDB-GENE-030131-1007]
56. ube2e2 ENSDARG00000034670 5918 1.699 - 0.960 - - 0.739 - - - - ubiquitin-conjugating enzyme E2E 2 [Source:ZFIN;Acc:ZDB-GENE-040801-237]
57. rps17 ENSDARG00000104011 27028 1.685 0.757 - - - - 0.928 - - - ribosomal protein S17 [Source:ZFIN;Acc:ZDB-GENE-040426-1852]
58. atp5c1 31368 1.683 0.762 - - - - - 0.921 - - ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1, transcript variant 3
59. wu:fc51f04 wu:fc51f04 7074 1.679 - - - - 0.716 0.963 - - -
60. nr2f5 ENSDARG00000033172 11808 1.677 0.851 0.826 - - - - - - - nuclear receptor subfamily 2, group F, member 5 [Source:ZFIN;Acc:ZDB-GENE-990415-253]
61. pdhb ENSDARG00000021346 9088 1.676 - - - - 0.797 0.879 - - - pyruvate dehydrogenase E1 beta subunit [Source:ZFIN;Acc:ZDB-GENE-040426-2173]
62. h3f3b.1 ENSDARG00000020504, ENSDARG00000068434, ENSDARG00000068436 50840 1.674 0.787 - - - - 0.887 - - - H3 histone, family 3B.1 [Source:ZFIN;Acc:ZDB-GENE-050417-65]
63. anp32b ENSDARG00000023330 25013 1.648 0.941 0.707 - - - - - - - acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:ZFIN;Acc:ZDB-GENE-030131-719]
64. nckap1 ENSDARG00000060853 3540 1.634 - 0.760 - - 0.874 - - - - NCK-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4426]
65. col1a2 ENSDARG00000020007 36228 1.633 - 0.860 - - - 0.773 - - - collagen, type I, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8415]
66. rhogc ENSDARG00000028401 2671 1.625 - 0.746 - - 0.879 - - - - ras homolog gene family, member Gc [Source:ZFIN;Acc:ZDB-GENE-030131-3402]
67. aldh9a1a.1 ENSDARG00000069100, ENSDARG00000114905 30071 1.608 0.880 0.728 - - - - - - - aldehyde dehydrogenase 9 family, member A1a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1257]
68. pleca ENSDARG00000062590 16794 1.579 - - - - 0.724 0.855 - - - plectin a [Source:ZFIN;Acc:ZDB-GENE-030131-8984]
69. ndufs8a ENSDARG00000051986 17548 1.537 0.743 0.794 - - - - - - - NADH:ubiquinone oxidoreductase core subunit S8a [Source:ZFIN;Acc:ZDB-GENE-040426-2153]
70. FAT1 FAT1 689 1 - - - - - - 1.000 - -
71. pinx1 ENSDARG00000023532 4452 1 - - - - - - 1.000 - - PIN2 (TERF1) interacting telomerase inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-030515-2]
72. CR388095.3 CR388095.3 2548 1 - - - - - - 1.000 - -
73. plagl2 ENSDARG00000076657 2057 1 - - - - - - 1.000 - - pleiomorphic adenoma gene-like 2 [Source:ZFIN;Acc:ZDB-GENE-020806-1]
74. rfxap ENSDARG00000076891 1299 1 - - - - - - 1.000 - - regulatory factor X-associated protein [Source:ZFIN;Acc:ZDB-GENE-091204-321]
75. fam160a1 fam160a1 1445 1 - - - - - - 1.000 - -
76. zgc:55558 ENSDARG00000013161, ENSDARG00000111354 1687 1 - - - - - - 1.000 - - zgc:55558 [Source:ZFIN;Acc:ZDB-GENE-040426-740]
77. NDUFB2 ENSDARG00000045490 9141 1 - - - - - - 1.000 - - NADH:ubiquinone oxidoreductase subunit B2 [Source:ZFIN;Acc:ZDB-GENE-040426-1762]
78. LMLN ENSDARG00000061265 1618 1 - - - - - - 1.000 - - leishmanolysin-like (metallopeptidase M8 family) [Source:ZFIN;Acc:ZDB-GENE-081104-298]
79. pcif1 ENSDARG00000099084 2851 1 - - - - - - 1.000 - - PDX1 C-terminal inhibiting factor 1 [Source:ZFIN;Acc:ZDB-GENE-120920-2]
80. rif1 ENSDARG00000062650, ENSDARG00000110568 1751 1 - - - - - - 1.000 - - replication timing regulatory factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3406]
81. hoxc10a ENSDARG00000070348 2323 1 - - - - - - 1.000 - - homeobox C10a [Source:ZFIN;Acc:ZDB-GENE-990415-110]
82. cx44.1 cx44.1 799 1 - - - - - - 1.000 - -
83. oafa ENSDARG00000075851 2015 1 - - - - - - 1.000 - - OAF homolog a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-090917-1]
84. lepre1 lepre1 5346 1 - - - - - - 1.000 - -
85. PREX2 ENSDARG00000071692 827 1 - - - - - - 1.000 - - phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2 [Source:ZFIN;Acc:ZDB-GENE-091113-37]
86. ttll4 ENSDARG00000078935 1663 1 - - - - - - 1.000 - - tubulin tyrosine ligase-like family, member 4 [Source:ZFIN;Acc:ZDB-GENE-070912-313]
87. thumpd3 ENSDARG00000059634, ENSDARG00000113066 7065 1 - - - - - - 1.000 - - THUMP domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9745]
88. CCNA2 ENSDARG00000011094 3996 1 - - - - - - 1.000 - - cyclin A2 [Source:ZFIN;Acc:ZDB-GENE-020418-1]
89. alcamb ENSDARG00000058538 5672 0.999 - - - - - - 0.999 - - activated leukocyte cell adhesion molecule b [Source:ZFIN;Acc:ZDB-GENE-030131-1768]
90. slc4a2b ENSDARG00000052330 1900 0.999 - - - - - - 0.999 - - solute carrier family 4 (anion exchanger), member 2b [Source:ZFIN;Acc:ZDB-GENE-030429-14]
91. TSG101 TSG101 1686 0.999 - - - - - - 0.999 - -
92. wwp2 ENSDARG00000061345 3459 0.999 - - - - - - 0.999 - - WW domain containing E3 ubiquitin protein ligase 2 [Source:ZFIN;Acc:ZDB-GENE-000607-82]
93. ryr1a ENSDARG00000011422 2377 0.999 - - - - - - 0.999 - - ryanodine receptor 1a (skeletal) [Source:ZFIN;Acc:ZDB-GENE-020108-2]
94. SNORD33 SNORD33 3284 0.999 - - - - - - 0.999 - -
95. CR847934.1 CR847934.1 2658 0.999 - - - - - - 0.999 - -
96. hbbe2 ENSDARG00000045143, ENSDARG00000109554 5244 0.999 - - - - - - 0.999 - - hemoglobin beta embryonic-2 [Source:ZFIN;Acc:ZDB-GENE-040702-1]
97. rnd3a ENSDARG00000076799 4705 0.999 - - - - - - 0.999 - - Rho family GTPase 3a [Source:ZFIN;Acc:ZDB-GENE-010319-40]
98. tmco1 ENSDARG00000069099, ENSDARG00000113013 4698 0.999 - - - - - - 0.999 - - transmembrane and coiled-coil domains 1 [Source:ZFIN;Acc:ZDB-GENE-050417-344]
99. slc7a4 ENSDARG00000068286 1693 0.999 - - - - - - 0.999 - - solute carrier family 7, member 4 [Source:ZFIN;Acc:ZDB-GENE-030919-2]
100. lhfpl2b_1 ENSDARG00000098153 1596 0.999 - - - - - - 0.999 - - LHFPL tetraspan subfamily member 2b [Source:ZFIN;Acc:ZDB-GENE-050417-10]

There are 885 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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